| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is purN [H]
Identifier: 33862982
GI number: 33862982
Start: 766458
End: 767180
Strand: Reverse
Name: purN [H]
Synonym: PMT0710
Alternate gene names: 33862982
Gene position: 767180-766458 (Counterclockwise)
Preceding gene: 33862985
Following gene: 33862980
Centisome position: 31.82
GC content: 48.13
Gene sequence:
>723_bases ATGAACAACTTAGATAAAAAGGAGATTTGTCTGACCAGTGCTGCTTCGAATCCTCTTCAGAACAGTTGCTATGAAAAGGA TGCGAAGCGATCGCTGATCTGGCCACCCCTCCAGGCCAGCCCAAAATTCAACCCTCGCTTAAATCTTGGCGTGATGGCAT CAGGGAATGGCAGCAATTTTGAAGCCCTGGTTAAAGCCATTCAAAATTCTCAACTTGATGCTTATATTTCCATATTGGTG GTTAACAACCCTAATTGTGAAGCAAGTCTCCGGGCCAAACGGCTAGGTGTGCCTTGTGTCATCCACGATCATCGCGAATT CAGTAGTCGAGAAGAACTGGATAAGGCCTTGGTAAAGACATTCACTAACCATGCTGTAGAAGGCGTGGTGATGGCCGGCT GGATGCGAATCGTCACCCCAATCCTGATTGCTGCTTTCCCGAATCGCCTTATTAATATTCACCCATCTCTGCTTCCTAGC TTTCGCGGTTTAGATGCGGTTGGGCAAGCACTTAAAGCGAGAGTTGCTATCAGTGGTTGTTCCGTTCACCTGGTTACACC TCAAGTAGATGACGGTCCGGTGCTTGCGCAAGCTGCAGTGCCAGTTTTGAGCTCAGACGACCATCAGAGCCTCAGCAAAA GGATCCAGCGCATGGAGCATCAACTGCTTCCATTATCTGTTGCTCTTGCAGGCCAGAATTGGAGAAACGCAGCTCAAAAT TAA
Upstream 100 bases:
>100_bases GGATCACAGCAGGGGTTCCAATTGGATGCTGCACATAGGAATTAAGTTGTGAATTGGATGTGCTTAGAGCATGTAGCTGG TCTTCTCAATCGTCAACAAG
Downstream 100 bases:
>100_bases GGGTAGAAGGTCAGTAAAGACATCCCTGTGGTTGGTGGTAATCCAGCCATCAGGTTTAGACATTGAACCCCTTGACCAGC TTGGCCTTTAATCAGGTTGT
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNNLDKKEICLTSAASNPLQNSCYEKDAKRSLIWPPLQASPKFNPRLNLGVMASGNGSNFEALVKAIQNSQLDAYISILV VNNPNCEASLRAKRLGVPCVIHDHREFSSREELDKALVKTFTNHAVEGVVMAGWMRIVTPILIAAFPNRLINIHPSLLPS FRGLDAVGQALKARVAISGCSVHLVTPQVDDGPVLAQAAVPVLSSDDHQSLSKRIQRMEHQLLPLSVALAGQNWRNAAQN
Sequences:
>Translated_240_residues MNNLDKKEICLTSAASNPLQNSCYEKDAKRSLIWPPLQASPKFNPRLNLGVMASGNGSNFEALVKAIQNSQLDAYISILV VNNPNCEASLRAKRLGVPCVIHDHREFSSREELDKALVKTFTNHAVEGVVMAGWMRIVTPILIAAFPNRLINIHPSLLPS FRGLDAVGQALKARVAISGCSVHLVTPQVDDGPVLAQAAVPVLSSDDHQSLSKRIQRMEHQLLPLSVALAGQNWRNAAQN >Mature_240_residues MNNLDKKEICLTSAASNPLQNSCYEKDAKRSLIWPPLQASPKFNPRLNLGVMASGNGSNFEALVKAIQNSQLDAYISILV VNNPNCEASLRAKRLGVPCVIHDHREFSSREELDKALVKTFTNHAVEGVVMAGWMRIVTPILIAAFPNRLINIHPSLLPS FRGLDAVGQALKARVAISGCSVHLVTPQVDDGPVLAQAAVPVLSSDDHQSLSKRIQRMEHQLLPLSVALAGQNWRNAAQN
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=195, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI209869995, Length=195, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI209869993, Length=195, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=2e-31, Organism=Escherichia coli, GI1788846, Length=182, Percent_Identity=36.2637362637363, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1787483, Length=138, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17567511, Length=179, Percent_Identity=32.9608938547486, Blast_Score=116, Evalue=9e-27, Organism=Drosophila melanogaster, GI24582400, Length=186, Percent_Identity=37.6344086021505, Blast_Score=138, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 26151; Mature: 26151
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLDKKEICLTSAASNPLQNSCYEKDAKRSLIWPPLQASPKFNPRLNLGVMASGNGSNF CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCH EALVKAIQNSQLDAYISILVVNNPNCEASLRAKRLGVPCVIHDHREFSSREELDKALVKT HHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHH FTNHAVEGVVMAGWMRIVTPILIAAFPNRLINIHPSLLPSFRGLDAVGQALKARVAISGC HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCHHHCCCCCCHHHHHHHHHHHHEEECC SVHLVTPQVDDGPVLAQAAVPVLSSDDHQSLSKRIQRMEHQLLPLSVALAGQNWRNAAQN EEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCC >Mature Secondary Structure MNNLDKKEICLTSAASNPLQNSCYEKDAKRSLIWPPLQASPKFNPRLNLGVMASGNGSNF CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCH EALVKAIQNSQLDAYISILVVNNPNCEASLRAKRLGVPCVIHDHREFSSREELDKALVKT HHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHH FTNHAVEGVVMAGWMRIVTPILIAAFPNRLINIHPSLLPSFRGLDAVGQALKARVAISGC HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCHHHCCCCCCHHHHHHHHHHHHEEECC SVHLVTPQVDDGPVLAQAAVPVLSSDDHQSLSKRIQRMEHQLLPLSVALAGQNWRNAAQN EEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]