| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is leuS [H]
Identifier: 33862987
GI number: 33862987
Start: 772530
End: 775166
Strand: Reverse
Name: leuS [H]
Synonym: PMT0715
Alternate gene names: 33862987
Gene position: 775166-772530 (Counterclockwise)
Preceding gene: 33862993
Following gene: 33862985
Centisome position: 32.15
GC content: 48.08
Gene sequence:
>2637_bases GTGACGGAGTCTTTCCCCTCAACGTCTGCCTCCAGCCAATCCTCAGCTCGATATGACCCTATTGAGCTTGAAACGCGTTG GCAAAAGGAGTGGTTACGACAAGGATTAGATCGAACGCCAGTCGCAGAAACTAACCAGAAACGCTTTTACGCCCTATCGA TGTTCCCTTATCCATCAGGGAAACTTCACATGGGCCACGTACGCAATTACGTGATTACCGATGTGATTGCCAGGGTGCAG CGCATGCGAGGTGATGCGGTACTTCACCCAATGGGATGGGATGCCTTTGGCTTACCAGCTGAGAATGCAGCCATCGCCAG AAACGTAGATCCAGGTGATTGGACAGACCAAAATATTGCCCAAATGAGGGCCCAGCTTGATCGACTGGGTTTGTCGATTG ACTGGGACCGGCAACAGGCGACTTGCCATCAGGACTATTACCGCTGGACCCAGTGGTTGTTCCTTGAACTTTTTGCGGGT GGATTGGCTTATCAGAAGGAAGCGACAGTCAACTGGGATCCCGTCGACAAAACTGTTCTGGCTAATGAACAAGTCGATGG CGAGGGTCGTTCATGGCGGTCAGGCGCTCTTGTGGAACAGCGACAACTCAAGCAATGGTTCCTGCGAATCACCGACTATG CCGATGCGTTAATTGATGACCTTGATGAATTGACTGGTTGGCCCGAGCGTGTCCGCACGATGCAAGCCAATTGGATTGGT CGCTCTCATGGTGCTGAGATCAAGTTCAGAGTCGCTGGTGTAGCCAACTCAATCATCACGGTCTTCACAACAAGGCCAGA CACACTTCACGGTGCAAGTTATGTGGTTTTGGCACCTGAGCACCCTTTGGTGGAATCCCTAACAAGTCCGGAACAACGTC TTGCCGTTACTGCATTCTGTGACCTTATAAGCCAACTCAGCGTCAAGGATCGCACCGCTGAGGACCAACCAAAACGTGGG GTCCCGATCGGTGCACAGGTGATCAATCCAGTCAATGGTGAATCACTACCCGTTTGGATTGCCGATTACGTATTGGCTGA CTATGGCTCAGGAGCCGTTATGGGAGTACCCGCTCATGATGAGCGGGATTTCATCTTTGCTCGCAGCCACGAACTACCGA TACGCATTGTGGTGCAGCTGCCAGATACAGACGAGCATCACAATGATGGACAAGCCTGGACCGGGGCCGGAGTTCTTGTA AATTCTGGAGCCTTTGATGGTCTCTCCACAGAGGAAGCGAAGGTTGCGATTACAACCCATGGAGCTTCTGAGGGTTGGGC TCAAAGCAAAGTGCAATACCGTTTGCGCGATTGGCTCATTTCTCGTCAGCGCTACTGGGGTTGCCCGATCCCAATCATTC ACTGTGCAAGCTGTGGAATAGTTCCTGTTCCGCAAGAGGACCTACCTGTAACCCTTCCTAGGGACATAGATCTTTCAGGA AAAGGAGGATCCCCCATAGCGCAAGAACAGGCTTGGGTTGAGGTTAAATGTCCTATTTGTGGTGAAAAAGCTCACAGGGA AACAGACACGATGGACACCTTTATGTGTTCTTCATGGTATTACCTACGTTTTGCTGATCCACTCAATAGTCAACGTCCAT TTGATAAAGATATTGTTGATGAATGGTTGCCTGTTGATCAGTATGTAGGTGGTATTGAACATGCAATCCTCCATCTCCTA TATGCACGCTTTTTTACAAAAGCACTCCACGATAGAAACCTCATTGGCTTTAAAGAACCATTTAATCGATTACTTACTCA AGGCATGGTTCAAGGGCTTACCTACCGCAATGCTAAAAATGGCAGTTATATTTCTCCTGAACTTGTTAGTGATGATAGTG ATCCGAGGGACCCAGAGTCTGGAGACAGACTAGAGGTCCTGTTTGAAAAGATGTCTAAATCAAAATATAATGGCGTTGAT CCTGCCGTTGTAATCGATCGATACGGTGCCGACACCGCTAGAATGTTCATACTTTTTAAAGCGCCACCAGAGAAAGACCT GGAATGGGATGATGCAGATGTTGAAGGTCAATTTCGTTTTCTGCAACGACTTATTCGTCTGATTGATAGTTTTGCATGGC CTAAGACTGATGGTGAGAATGCCTCCATTTCTTCGGCAAACTTGATCATAGATTCAGCTGATCTCAGTGAAGAAGAGATC AACATGAGAAGAGCTACTCACAAGGCGATAGAGGCAATAACTGAGGACTTAAGTGGTGACATTCAATTGAATACAGCCAT CTCCGAACTCATGAAGCTATCCAACTCGTTGAGTGGAAAACTAGACAAGGTACGTAATGAAGTGGCTGCAGAGGCTCTTT CAGTTTTAGTTCGATTGATGGCACCCTTTGCTCCTCATCTTGCAGAAGAATTCTGGCTGAAGCTTCATGGGCATGGAAGC ATCCATCAACAATCCTGGCCTGTAATCGACCCAAGCGCACTTGTTCTCGAAACGATTGAGCTCGTCATTCAAGTCAAAGG GAAGGTACGTGGAAAAATCCAGGTACCTGCTAACGCAGACAAAAAGACATTAGAAGAATTGGCCTTAAACAGTGACATCG CCGTCAAATGGTTAGAAGGTCAATCGCCTAGACGGATCATCATTGTGCCAGGCAAGTTGGTGAACCTAGTGCCATAG
Upstream 100 bases:
>100_bases GATTAACCGTCGGGCTGTACTGATAATTCGTCCACTGGGCTAACTCAACTCCCTAGCGTCATCTTGTTATGGCACGATCG AAAGTTGGTGAAACTTGTAC
Downstream 100 bases:
>100_bases AAATGATCAGCCTTTGCTGAAACGTAGTGAAGTCGGAATTCCCCAATCACCTTCAGCAACATAACCACGCTTATTCGCAG TTAGATGCCTCATGATCCAA
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 878; Mature: 877
Protein sequence:
>878_residues MTESFPSTSASSQSSARYDPIELETRWQKEWLRQGLDRTPVAETNQKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQ RMRGDAVLHPMGWDAFGLPAENAAIARNVDPGDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQDYYRWTQWLFLELFAG GLAYQKEATVNWDPVDKTVLANEQVDGEGRSWRSGALVEQRQLKQWFLRITDYADALIDDLDELTGWPERVRTMQANWIG RSHGAEIKFRVAGVANSIITVFTTRPDTLHGASYVVLAPEHPLVESLTSPEQRLAVTAFCDLISQLSVKDRTAEDQPKRG VPIGAQVINPVNGESLPVWIADYVLADYGSGAVMGVPAHDERDFIFARSHELPIRIVVQLPDTDEHHNDGQAWTGAGVLV NSGAFDGLSTEEAKVAITTHGASEGWAQSKVQYRLRDWLISRQRYWGCPIPIIHCASCGIVPVPQEDLPVTLPRDIDLSG KGGSPIAQEQAWVEVKCPICGEKAHRETDTMDTFMCSSWYYLRFADPLNSQRPFDKDIVDEWLPVDQYVGGIEHAILHLL YARFFTKALHDRNLIGFKEPFNRLLTQGMVQGLTYRNAKNGSYISPELVSDDSDPRDPESGDRLEVLFEKMSKSKYNGVD PAVVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRLIRLIDSFAWPKTDGENASISSANLIIDSADLSEEEI NMRRATHKAIEAITEDLSGDIQLNTAISELMKLSNSLSGKLDKVRNEVAAEALSVLVRLMAPFAPHLAEEFWLKLHGHGS IHQQSWPVIDPSALVLETIELVIQVKGKVRGKIQVPANADKKTLEELALNSDIAVKWLEGQSPRRIIIVPGKLVNLVP
Sequences:
>Translated_878_residues MTESFPSTSASSQSSARYDPIELETRWQKEWLRQGLDRTPVAETNQKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQ RMRGDAVLHPMGWDAFGLPAENAAIARNVDPGDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQDYYRWTQWLFLELFAG GLAYQKEATVNWDPVDKTVLANEQVDGEGRSWRSGALVEQRQLKQWFLRITDYADALIDDLDELTGWPERVRTMQANWIG RSHGAEIKFRVAGVANSIITVFTTRPDTLHGASYVVLAPEHPLVESLTSPEQRLAVTAFCDLISQLSVKDRTAEDQPKRG VPIGAQVINPVNGESLPVWIADYVLADYGSGAVMGVPAHDERDFIFARSHELPIRIVVQLPDTDEHHNDGQAWTGAGVLV NSGAFDGLSTEEAKVAITTHGASEGWAQSKVQYRLRDWLISRQRYWGCPIPIIHCASCGIVPVPQEDLPVTLPRDIDLSG KGGSPIAQEQAWVEVKCPICGEKAHRETDTMDTFMCSSWYYLRFADPLNSQRPFDKDIVDEWLPVDQYVGGIEHAILHLL YARFFTKALHDRNLIGFKEPFNRLLTQGMVQGLTYRNAKNGSYISPELVSDDSDPRDPESGDRLEVLFEKMSKSKYNGVD PAVVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRLIRLIDSFAWPKTDGENASISSANLIIDSADLSEEEI NMRRATHKAIEAITEDLSGDIQLNTAISELMKLSNSLSGKLDKVRNEVAAEALSVLVRLMAPFAPHLAEEFWLKLHGHGS IHQQSWPVIDPSALVLETIELVIQVKGKVRGKIQVPANADKKTLEELALNSDIAVKWLEGQSPRRIIIVPGKLVNLVP >Mature_877_residues TESFPSTSASSQSSARYDPIELETRWQKEWLRQGLDRTPVAETNQKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQR MRGDAVLHPMGWDAFGLPAENAAIARNVDPGDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQDYYRWTQWLFLELFAGG LAYQKEATVNWDPVDKTVLANEQVDGEGRSWRSGALVEQRQLKQWFLRITDYADALIDDLDELTGWPERVRTMQANWIGR SHGAEIKFRVAGVANSIITVFTTRPDTLHGASYVVLAPEHPLVESLTSPEQRLAVTAFCDLISQLSVKDRTAEDQPKRGV PIGAQVINPVNGESLPVWIADYVLADYGSGAVMGVPAHDERDFIFARSHELPIRIVVQLPDTDEHHNDGQAWTGAGVLVN SGAFDGLSTEEAKVAITTHGASEGWAQSKVQYRLRDWLISRQRYWGCPIPIIHCASCGIVPVPQEDLPVTLPRDIDLSGK GGSPIAQEQAWVEVKCPICGEKAHRETDTMDTFMCSSWYYLRFADPLNSQRPFDKDIVDEWLPVDQYVGGIEHAILHLLY ARFFTKALHDRNLIGFKEPFNRLLTQGMVQGLTYRNAKNGSYISPELVSDDSDPRDPESGDRLEVLFEKMSKSKYNGVDP AVVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRLIRLIDSFAWPKTDGENASISSANLIIDSADLSEEEIN MRRATHKAIEAITEDLSGDIQLNTAISELMKLSNSLSGKLDKVRNEVAAEALSVLVRLMAPFAPHLAEEFWLKLHGHGSI HQQSWPVIDPSALVLETIELVIQVKGKVRGKIQVPANADKKTLEELALNSDIAVKWLEGQSPRRIIIVPGKLVNLVP
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=879, Percent_Identity=41.8657565415245, Blast_Score=673, Evalue=0.0, Organism=Homo sapiens, GI268370297, Length=885, Percent_Identity=21.9209039548023, Blast_Score=91, Evalue=7e-18, Organism=Homo sapiens, GI268370293, Length=885, Percent_Identity=21.9209039548023, Blast_Score=91, Evalue=7e-18, Organism=Escherichia coli, GI1786861, Length=876, Percent_Identity=44.7488584474886, Blast_Score=730, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=377, Percent_Identity=23.8726790450928, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71997510, Length=845, Percent_Identity=31.4792899408284, Blast_Score=399, Evalue=1e-111, Organism=Caenorhabditis elegans, GI71997517, Length=845, Percent_Identity=31.4792899408284, Blast_Score=399, Evalue=1e-111, Organism=Caenorhabditis elegans, GI212645227, Length=380, Percent_Identity=31.0526315789474, Blast_Score=169, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6323414, Length=885, Percent_Identity=41.5819209039548, Blast_Score=657, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6321531, Length=379, Percent_Identity=21.6358839050132, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325217, Length=145, Percent_Identity=26.2068965517241, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21355409, Length=895, Percent_Identity=36.8715083798883, Blast_Score=518, Evalue=1e-147,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 98559; Mature: 98427
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESFPSTSASSQSSARYDPIELETRWQKEWLRQGLDRTPVAETNQKRFYALSMFPYPSG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCC KLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENAAIARNVDPGDWTDQNIA CEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHHH QMRAQLDRLGLSIDWDRQQATCHQDYYRWTQWLFLELFAGGLAYQKEATVNWDPVDKTVL HHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE ANEQVDGEGRSWRSGALVEQRQLKQWFLRITDYADALIDDLDELTGWPERVRTMQANWIG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC RSHGAEIKFRVAGVANSIITVFTTRPDTLHGASYVVLAPEHPLVESLTSPEQRLAVTAFC CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHH DLISQLSVKDRTAEDQPKRGVPIGAQVINPVNGESLPVWIADYVLADYGSGAVMGVPAHD HHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCC ERDFIFARSHELPIRIVVQLPDTDEHHNDGQAWTGAGVLVNSGAFDGLSTEEAKVAITTH CCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCEEEEEEC GASEGWAQSKVQYRLRDWLISRQRYWGCPIPIIHCASCGIVPVPQEDLPVTLPRDIDLSG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEECCCCCCCCC KGGSPIAQEQAWVEVKCPICGEKAHRETDTMDTFMCSSWYYLRFADPLNSQRPFDKDIVD CCCCCCCCCCCEEEEECCCCCCHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHH EWLPVDQYVGGIEHAILHLLYARFFTKALHDRNLIGFKEPFNRLLTQGMVQGLTYRNAKN HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GSYISPELVSDDSDPRDPESGDRLEVLFEKMSKSKYNGVDPAVVIDRYGADTARMFILFK CCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEE APPEKDLEWDDADVEGQFRFLQRLIRLIDSFAWPKTDGENASISSANLIIDSADLSEEEI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHH NMRRATHKAIEAITEDLSGDIQLNTAISELMKLSNSLSGKLDKVRNEVAAEALSVLVRLM HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH APFAPHLAEEFWLKLHGHGSIHQQSWPVIDPSALVLETIELVIQVKGKVRGKIQVPANAD HHHCHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC KKTLEELALNSDIAVKWLEGQSPRRIIIVPGKLVNLVP HHHHHHHHCCCCEEEEEECCCCCCEEEEECCHHHCCCC >Mature Secondary Structure TESFPSTSASSQSSARYDPIELETRWQKEWLRQGLDRTPVAETNQKRFYALSMFPYPSG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCC KLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENAAIARNVDPGDWTDQNIA CEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHHH QMRAQLDRLGLSIDWDRQQATCHQDYYRWTQWLFLELFAGGLAYQKEATVNWDPVDKTVL HHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE ANEQVDGEGRSWRSGALVEQRQLKQWFLRITDYADALIDDLDELTGWPERVRTMQANWIG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC RSHGAEIKFRVAGVANSIITVFTTRPDTLHGASYVVLAPEHPLVESLTSPEQRLAVTAFC CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHH DLISQLSVKDRTAEDQPKRGVPIGAQVINPVNGESLPVWIADYVLADYGSGAVMGVPAHD HHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCC ERDFIFARSHELPIRIVVQLPDTDEHHNDGQAWTGAGVLVNSGAFDGLSTEEAKVAITTH CCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCEEEEEEC GASEGWAQSKVQYRLRDWLISRQRYWGCPIPIIHCASCGIVPVPQEDLPVTLPRDIDLSG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEECCCCCCCCC KGGSPIAQEQAWVEVKCPICGEKAHRETDTMDTFMCSSWYYLRFADPLNSQRPFDKDIVD CCCCCCCCCCCEEEEECCCCCCHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHH EWLPVDQYVGGIEHAILHLLYARFFTKALHDRNLIGFKEPFNRLLTQGMVQGLTYRNAKN HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GSYISPELVSDDSDPRDPESGDRLEVLFEKMSKSKYNGVDPAVVIDRYGADTARMFILFK CCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEE APPEKDLEWDDADVEGQFRFLQRLIRLIDSFAWPKTDGENASISSANLIIDSADLSEEEI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHH NMRRATHKAIEAITEDLSGDIQLNTAISELMKLSNSLSGKLDKVRNEVAAEALSVLVRLM HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH APFAPHLAEEFWLKLHGHGSIHQQSWPVIDPSALVLETIELVIQVKGKVRGKIQVPANAD HHHCHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC KKTLEELALNSDIAVKWLEGQSPRRIIIVPGKLVNLVP HHHHHHHHCCCCEEEEEECCCCCCEEEEECCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA