| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862823
Identifier: 33862823
GI number: 33862823
Start: 604969
End: 605454
Strand: Reverse
Name: 33862823
Synonym: PMT0550
Alternate gene names: NA
Gene position: 605454-604969 (Counterclockwise)
Preceding gene: 33862824
Following gene: 33862822
Centisome position: 25.11
GC content: 43.83
Gene sequence:
>486_bases ATGGGACGACGAGTAATGCCATCCTCTCCACACCCTATCGAGTTGGCCATTGTGGTTGTCAATGGTTTGATAGTGCCCAT ACAACGCTTCTCGAGGGTTATCAAGCCCTTGCTAATCTTCCTTCGTCCAGCTTGGTTAGGCTTACAACCTCTGCTCTTGA TTCTGCACCTACTCCTGGTGTATTCGATGGCTCTGGTTATAGCCCTGGCCGAATGGCTGCTTGGATTTTCATTCACAGTC GAAAGCAGTAATGGTCAAAGCGTTGATTCGACAGCCAAGCAGACAGATAATTCACAATCAATGGTGCTTGGCATTCATCC ATCAGAGTTAAAGACAGAAGATGCATCTCAACACGAGATCGATCGGGCTAACTATCCTGATGAAAATGAATTCACATCAA ATTCTTTTCAGCCAGAAAGAAAACCCTTCTTCTTAAACCTAGAAATCAAGAGAAGAGAACAAACGGTAATGATTATCAGA AGTTAA
Upstream 100 bases:
>100_bases CTCGATTGTCGAGCTCGGAGAGTGATGTTAAATGGTTGTTGATCGTCTATGGATCCTTCTCTAGGTCTAGCGATGCATTG GAAGAACTAGATTTTCCTGA
Downstream 100 bases:
>100_bases TTATCACCAGCCGTCAAGCATGGAATCTCCTCTACGCAAGAGTGAGCAGAGAAATGTAACCCCTTAACTAAGAAAAGCAA GTCTCTAAAGCCAGCTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MGRRVMPSSPHPIELAIVVVNGLIVPIQRFSRVIKPLLIFLRPAWLGLQPLLLILHLLLVYSMALVIALAEWLLGFSFTV ESSNGQSVDSTAKQTDNSQSMVLGIHPSELKTEDASQHEIDRANYPDENEFTSNSFQPERKPFFLNLEIKRREQTVMIIR S
Sequences:
>Translated_161_residues MGRRVMPSSPHPIELAIVVVNGLIVPIQRFSRVIKPLLIFLRPAWLGLQPLLLILHLLLVYSMALVIALAEWLLGFSFTV ESSNGQSVDSTAKQTDNSQSMVLGIHPSELKTEDASQHEIDRANYPDENEFTSNSFQPERKPFFLNLEIKRREQTVMIIR S >Mature_160_residues GRRVMPSSPHPIELAIVVVNGLIVPIQRFSRVIKPLLIFLRPAWLGLQPLLLILHLLLVYSMALVIALAEWLLGFSFTVE SSNGQSVDSTAKQTDNSQSMVLGIHPSELKTEDASQHEIDRANYPDENEFTSNSFQPERKPFFLNLEIKRREQTVMIIRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18251; Mature: 18119
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRVMPSSPHPIELAIVVVNGLIVPIQRFSRVIKPLLIFLRPAWLGLQPLLLILHLLLV CCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YSMALVIALAEWLLGFSFTVESSNGQSVDSTAKQTDNSQSMVLGIHPSELKTEDASQHEI HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCCCCEEEEECCHHHCCCCCCHHHC DRANYPDENEFTSNSFQPERKPFFLNLEIKRREQTVMIIRS CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEC >Mature Secondary Structure GRRVMPSSPHPIELAIVVVNGLIVPIQRFSRVIKPLLIFLRPAWLGLQPLLLILHLLLV CCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YSMALVIALAEWLLGFSFTVESSNGQSVDSTAKQTDNSQSMVLGIHPSELKTEDASQHEI HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCCCCEEEEECCHHHCCCCCCHHHC DRANYPDENEFTSNSFQPERKPFFLNLEIKRREQTVMIIRS CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA