| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is sdmt
Identifier: 33862824
GI number: 33862824
Start: 605826
End: 606653
Strand: Reverse
Name: sdmt
Synonym: PMT0551
Alternate gene names: NA
Gene position: 606653-605826 (Counterclockwise)
Preceding gene: 33862825
Following gene: 33862823
Centisome position: 25.16
GC content: 49.64
Gene sequence:
>828_bases ATGAATTCATCATCATCAACTGTTGCTGCTACTTATTACGACAGCAGCGATGCAGATCGGTTTTATGCCGAGATTTGGGG AGGTGAAGATATCCATATCGGCCTATACGAGACTGCCGACCAAGCCATCGCTTCCGCGAGCGAGAGAACCGTGCAAGCAC TTATGGAGCTTGCAACTCAACCTCCAGCTAAAGGTTGCGTCGTTGACCTTGGCTCTGGGTATGGGGGAGCGGCACGACGT ATCGCCAAGCAATGGCAGGTCAATGTGCATGCTGTCAATATCTCTGCCGTTGAGAATATGCGCCATCGAGATCTCAACAA TGCTGCTGGATTAGCCAAGCTCATCGAAGTACATGATGCATCATTCGAAGAAGTGCCATTGCCCGATGGCATAGCAGATG TGGTTTGGAGTCAAGACGCCATACTTCATTCCGGCAATCGTCTCCAGGTAATGAATGAAGTGTCAAGGCTTCTTAAGCCG GGGGGTGTATTTGTCTTAACAGATCCAATGGCATGCGACGGCATCGAAGCCAACGCCCTTCAACCGATTCTTGATCGTAT CCACCTATCAGATTTGGCATCTCCTGATCGTTACCGAACCTGGGCAGAGGCTTCAGGGATGACTAGAGATGTATGGCAAG AACGCACAGAAATGCTTGTGAGGCATTACACGCGGGTTCGAGAGGAACTACGTCGACGTCATCAAGAACTTGCGAGTGTA ATTAGTACGGATTATTTGAGTCGCATGGATGCAGGCCTTGGTCATTGGATTGAAGGTGGGAGTCAGGGAAGACTTTGCTG GGGCCTAATGCGTTTTACAAAGCACTAA
Upstream 100 bases:
>100_bases ATTTTTATGTACATGTCGCTGAGAAGGAATACAAAGCAGACATTAAACAAAACTGATACGTGATATTAAAGACTTCAGCA AAATACAATCCTAATCAATC
Downstream 100 bases:
>100_bases CTTATGACTTAACATCAATTCTTCTTTTGTTTTATAGTGAATCATATCAAGAATCTATCTTGGTGATTAATCGACAGGCA AGACGATCCTCCTCAACTGG
Product: sarcosine-dimethylglycine methyltransferase
Products: NA
Alternate protein names: Sterol-C-Methyltransferase; Sarcosine-Dimethylglycine Methyltransferase; Cyclopropane-Fatty-Acyl-Phospholipid Synthase; Glycine-Sarcosine Methyltransferase; Methyltransferase; Delta(24)-Sterol C-Methyltransferase; Glycine/Sarcosine N-Methyltransferase; NDP-Hexose 3-O-Methyltransferase; Sarcosine/Dimethylglycine N-Methyltransferase; Glycine Sarcosine N-Methyltransferase; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Cyclopropane-Fatty-Acyl-Phospholipid Synthase Superfamily
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNSSSSTVAATYYDSSDADRFYAEIWGGEDIHIGLYETADQAIASASERTVQALMELATQPPAKGCVVDLGSGYGGAARR IAKQWQVNVHAVNISAVENMRHRDLNNAAGLAKLIEVHDASFEEVPLPDGIADVVWSQDAILHSGNRLQVMNEVSRLLKP GGVFVLTDPMACDGIEANALQPILDRIHLSDLASPDRYRTWAEASGMTRDVWQERTEMLVRHYTRVREELRRRHQELASV ISTDYLSRMDAGLGHWIEGGSQGRLCWGLMRFTKH
Sequences:
>Translated_275_residues MNSSSSTVAATYYDSSDADRFYAEIWGGEDIHIGLYETADQAIASASERTVQALMELATQPPAKGCVVDLGSGYGGAARR IAKQWQVNVHAVNISAVENMRHRDLNNAAGLAKLIEVHDASFEEVPLPDGIADVVWSQDAILHSGNRLQVMNEVSRLLKP GGVFVLTDPMACDGIEANALQPILDRIHLSDLASPDRYRTWAEASGMTRDVWQERTEMLVRHYTRVREELRRRHQELASV ISTDYLSRMDAGLGHWIEGGSQGRLCWGLMRFTKH >Mature_275_residues MNSSSSTVAATYYDSSDADRFYAEIWGGEDIHIGLYETADQAIASASERTVQALMELATQPPAKGCVVDLGSGYGGAARR IAKQWQVNVHAVNISAVENMRHRDLNNAAGLAKLIEVHDASFEEVPLPDGIADVVWSQDAILHSGNRLQVMNEVSRLLKP GGVFVLTDPMACDGIEANALQPILDRIHLSDLASPDRYRTWAEASGMTRDVWQERTEMLVRHYTRVREELRRRHQELASV ISTDYLSRMDAGLGHWIEGGSQGRLCWGLMRFTKH
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30534; Mature: 30534
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSSSTVAATYYDSSDADRFYAEIWGGEDIHIGLYETADQAIASASERTVQALMELATQ CCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC PPAKGCVVDLGSGYGGAARRIAKQWQVNVHAVNISAVENMRHRDLNNAAGLAKLIEVHDA CCCCCCEEECCCCCCHHHHHHHHHHEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCC SFEEVPLPDGIADVVWSQDAILHSGNRLQVMNEVSRLLKPGGVFVLTDPMACDGIEANAL CCCCCCCCCCHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH QPILDRIHLSDLASPDRYRTWAEASGMTRDVWQERTEMLVRHYTRVREELRRRHQELASV HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISTDYLSRMDAGLGHWIEGGSQGRLCWGLMRFTKH HHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNSSSSTVAATYYDSSDADRFYAEIWGGEDIHIGLYETADQAIASASERTVQALMELATQ CCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC PPAKGCVVDLGSGYGGAARRIAKQWQVNVHAVNISAVENMRHRDLNNAAGLAKLIEVHDA CCCCCCEEECCCCCCHHHHHHHHHHEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCC SFEEVPLPDGIADVVWSQDAILHSGNRLQVMNEVSRLLKPGGVFVLTDPMACDGIEANAL CCCCCCCCCCHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH QPILDRIHLSDLASPDRYRTWAEASGMTRDVWQERTEMLVRHYTRVREELRRRHQELASV HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISTDYLSRMDAGLGHWIEGGSQGRLCWGLMRFTKH HHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA