Click here to switch to the map view.

The map label for this gene is 33862822

Identifier: 33862822

GI number: 33862822

Start: 603945

End: 604493

Strand: Reverse

Name: 33862822

Synonym: PMT0549

Alternate gene names: NA

Gene position: 604493-603945 (Counterclockwise)

Preceding gene: 33862823

Following gene: 33862821

Centisome position: 25.07

GC content: 43.9

Gene sequence:

>549_bases
ATGGAACTTTCAATTAAACAGAGTGGTGTTCTTCATGGAATGCTCACTGGCACAGCAATTTCGATAGGGATCATTATTTT
CGGAATTTTGCTAAATCCGTTTAATTTCCATTCCAATCTTACACTCTTAGAAAAAAGTTCTGTTCTGTTTAAATCACTAA
TCATTCTTGCTCTCTGCCTTACTATTTCGATTGGCCGTCTTGCAAAGCATCGCTTCTTTAGCCCAGACGAGCTAGATGGA
AAAGGTCTTAGAACAGATTCTGATCGAGCCATCCTGCTCCAGTCTCTTCTTCAAAATACCCTTGAACAGTCTGTCCTAGC
AGCATTCGTTTATGGCACTTGGACATTCGTTATGCCCTCAGCATGGTTGTCTGTCGTACCGCTAGCAGCATTGTCTTTTG
CACTAGGGAGAGTTCTCTTCTTTGCAGGCTATCGGCGTGGTGCGGTAGGACGAGCGCTTGGTTTCACGATGGCTTTCTAT
CCTTCGGTTTTGATGTTGATCTGCACTGTCTGTTTTATTCCCCTCTCTGCCGTTACTGGTGGTTGCTAA

Upstream 100 bases:

>100_bases
ACTCCTGAAGAATTAGCTTTATATGATTTCTTCAGGTCAGGGCCATGAATCCTAGATATATTGAGTTGACACCAATATGC
ATACGAACTAGAAGTTAACA

Downstream 100 bases:

>100_bases
GGTGAAACTGTCACTACCTTCAGCCTCGGTAAAATGAACTAGTGTGATTCCGATATGATGCTCTTGATTCGTTAGCCGAT
AAACATACGTAGCACTTTTA

Product: ribosomal protein L11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MELSIKQSGVLHGMLTGTAISIGIIIFGILLNPFNFHSNLTLLEKSSVLFKSLIILALCLTISIGRLAKHRFFSPDELDG
KGLRTDSDRAILLQSLLQNTLEQSVLAAFVYGTWTFVMPSAWLSVVPLAALSFALGRVLFFAGYRRGAVGRALGFTMAFY
PSVLMLICTVCFIPLSAVTGGC

Sequences:

>Translated_182_residues
MELSIKQSGVLHGMLTGTAISIGIIIFGILLNPFNFHSNLTLLEKSSVLFKSLIILALCLTISIGRLAKHRFFSPDELDG
KGLRTDSDRAILLQSLLQNTLEQSVLAAFVYGTWTFVMPSAWLSVVPLAALSFALGRVLFFAGYRRGAVGRALGFTMAFY
PSVLMLICTVCFIPLSAVTGGC
>Mature_182_residues
MELSIKQSGVLHGMLTGTAISIGIIIFGILLNPFNFHSNLTLLEKSSVLFKSLIILALCLTISIGRLAKHRFFSPDELDG
KGLRTDSDRAILLQSLLQNTLEQSVLAAFVYGTWTFVMPSAWLSVVPLAALSFALGRVLFFAGYRRGAVGRALGFTMAFY
PSVLMLICTVCFIPLSAVTGGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19693; Mature: 19693

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSIKQSGVLHGMLTGTAISIGIIIFGILLNPFNFHSNLTLLEKSSVLFKSLIILALCL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TISIGRLAKHRFFSPDELDGKGLRTDSDRAILLQSLLQNTLEQSVLAAFVYGTWTFVMPS
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWLSVVPLAALSFALGRVLFFAGYRRGAVGRALGFTMAFYPSVLMLICTVCFIPLSAVTG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GC
CC
>Mature Secondary Structure
MELSIKQSGVLHGMLTGTAISIGIIIFGILLNPFNFHSNLTLLEKSSVLFKSLIILALCL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TISIGRLAKHRFFSPDELDGKGLRTDSDRAILLQSLLQNTLEQSVLAAFVYGTWTFVMPS
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWLSVVPLAALSFALGRVLFFAGYRRGAVGRALGFTMAFYPSVLMLICTVCFIPLSAVTG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA