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The map label for this gene is ldcA [C]

Identifier: 33862811

GI number: 33862811

Start: 586210

End: 587187

Strand: Reverse

Name: ldcA [C]

Synonym: PMT0538

Alternate gene names: 33862811

Gene position: 587187-586210 (Counterclockwise)

Preceding gene: 33862812

Following gene: 33862792

Centisome position: 24.36

GC content: 55.32

Gene sequence:

>978_bases
ATGCGACGGCGCTCGCTGCTGATGGGGCTTCCGGCTGCCATAGCAGCAACCTTTGCTTGGCCAAAGCTAGGGCGAACATT
GACCCCAGCCTTTCATGCATCGACACCTTTGGCGGCGCCAACACCACTTCGTGATGGTTCACGAATTCGGGCGGTCAATA
CTGGTACGTGGATCGATCCTCAAACAGACTTTTCTTTTTTAGTTGAGCGTTGCAAGGCGCAGGGGTGGCTCCTTGAATTG
CCTCCATCGTTGCATCGCCAATGGCATTGGTTTTCTGGCACAGATGCCCAGCGCCGCGCTGAACTAGAGGCCGCGTGGAG
GGATCCTCATGTTGATGGAATTGTCTACATCGGCTCTGGTTGGGGTAGCGCAAGGGTTTTGGAGGACGGGTTCCATTTCC
CACGACGCTCCCTTTGGAGCCTCGGCTTCTCAGACTCCAGTTCTCTGTTATTGGCCCAGTGGGGTGTGGGATCTCGCGGC
GCCATCCATGGGTCGATGACTGGGTCTGACGAACAATGGCAACGAACGGTTGGTCTGTTGTCTTGTCAATCTGTAGCCCC
GATATCAGGCATTGGGGTCATTCCAGGCATTGCTGTAGGCCCTTTAGTGGTAACCAATCTCACCGTGGCCACACATCTAA
TCGGAACACCCTGGTTCCCTGATTTGCGTGGTGCCGTATTAGTGCTCGAGGATGTAGGTGAAGCACCCTATCGGGTGGAT
CGCATGCTCACACAATGGCGCAGCGCAGGGCTGCTACGAGATGTTGCGGCCGTAGCTACAGGCCGTTTCAGCTGGAAAGG
GGAGATTGTCCCGGGAGACTTCTCAATGGTCGGCATCCTTGAGGAGCGTCTTTCTTCTCTTGGCGTGCCAATTGTCAGTG
ATCTTCCTGTTGGTCATGGCCAACCGAATCTTGCCTTGCCTCTTGGAGCAATAGCGCGCCTCGACGGACGCAATGGATCT
CTAATGTTGTTGTCCTAA

Upstream 100 bases:

>100_bases
TGTACTTGGCTTAATGCCCCATCCTGAACGGGCTTGTGATCCTGTGATTGGTGGTGTGGATGGCAGAGGATTATTGCAAT
CACTGCTTGGCTGATTCACG

Downstream 100 bases:

>100_bases
GCCATATTCATTAAAAAGGGAGGCCTCGCAGCCCCCCTCAGCGATTCATTTGGCCTTAATCATGCAGCAACAGCGTTTTT
TGGATCAAGCTGCCCTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRRRSLLMGLPAAIAATFAWPKLGRTLTPAFHASTPLAAPTPLRDGSRIRAVNTGTWIDPQTDFSFLVERCKAQGWLLEL
PPSLHRQWHWFSGTDAQRRAELEAAWRDPHVDGIVYIGSGWGSARVLEDGFHFPRRSLWSLGFSDSSSLLLAQWGVGSRG
AIHGSMTGSDEQWQRTVGLLSCQSVAPISGIGVIPGIAVGPLVVTNLTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVD
RMLTQWRSAGLLRDVAAVATGRFSWKGEIVPGDFSMVGILEERLSSLGVPIVSDLPVGHGQPNLALPLGAIARLDGRNGS
LMLLS

Sequences:

>Translated_325_residues
MRRRSLLMGLPAAIAATFAWPKLGRTLTPAFHASTPLAAPTPLRDGSRIRAVNTGTWIDPQTDFSFLVERCKAQGWLLEL
PPSLHRQWHWFSGTDAQRRAELEAAWRDPHVDGIVYIGSGWGSARVLEDGFHFPRRSLWSLGFSDSSSLLLAQWGVGSRG
AIHGSMTGSDEQWQRTVGLLSCQSVAPISGIGVIPGIAVGPLVVTNLTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVD
RMLTQWRSAGLLRDVAAVATGRFSWKGEIVPGDFSMVGILEERLSSLGVPIVSDLPVGHGQPNLALPLGAIARLDGRNGS
LMLLS
>Mature_325_residues
MRRRSLLMGLPAAIAATFAWPKLGRTLTPAFHASTPLAAPTPLRDGSRIRAVNTGTWIDPQTDFSFLVERCKAQGWLLEL
PPSLHRQWHWFSGTDAQRRAELEAAWRDPHVDGIVYIGSGWGSARVLEDGFHFPRRSLWSLGFSDSSSLLLAQWGVGSRG
AIHGSMTGSDEQWQRTVGLLSCQSVAPISGIGVIPGIAVGPLVVTNLTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVD
RMLTQWRSAGLLRDVAAVATGRFSWKGEIVPGDFSMVGILEERLSSLGVPIVSDLPVGHGQPNLALPLGAIARLDGRNGS
LMLLS

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=284, Percent_Identity=30.6338028169014, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 35116; Mature: 35116

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRSLLMGLPAAIAATFAWPKLGRTLTPAFHASTPLAAPTPLRDGSRIRAVNTGTWIDP
CCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECCCCCCC
QTDFSFLVERCKAQGWLLELPPSLHRQWHWFSGTDAQRRAELEAAWRDPHVDGIVYIGSG
CCCHHHHHHHHHHCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC
WGSARVLEDGFHFPRRSLWSLGFSDSSSLLLAQWGVGSRGAIHGSMTGSDEQWQRTVGLL
CCCCEEECCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHH
SCQSVAPISGIGVIPGIAVGPLVVTNLTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHH
RMLTQWRSAGLLRDVAAVATGRFSWKGEIVPGDFSMVGILEERLSSLGVPIVSDLPVGHG
HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCC
QPNLALPLGAIARLDGRNGSLMLLS
CCCCEECHHHHEEECCCCCCEEEEC
>Mature Secondary Structure
MRRRSLLMGLPAAIAATFAWPKLGRTLTPAFHASTPLAAPTPLRDGSRIRAVNTGTWIDP
CCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECCCCCCC
QTDFSFLVERCKAQGWLLELPPSLHRQWHWFSGTDAQRRAELEAAWRDPHVDGIVYIGSG
CCCHHHHHHHHHHCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC
WGSARVLEDGFHFPRRSLWSLGFSDSSSLLLAQWGVGSRGAIHGSMTGSDEQWQRTVGLL
CCCCEEECCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHH
SCQSVAPISGIGVIPGIAVGPLVVTNLTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHH
RMLTQWRSAGLLRDVAAVATGRFSWKGEIVPGDFSMVGILEERLSSLGVPIVSDLPVGHG
HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCC
QPNLALPLGAIARLDGRNGSLMLLS
CCCCEECHHHHEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]