| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862792
Identifier: 33862792
GI number: 33862792
Start: 568295
End: 569320
Strand: Reverse
Name: 33862792
Synonym: PMT0519
Alternate gene names: NA
Gene position: 569320-568295 (Counterclockwise)
Preceding gene: 33862811
Following gene: 33862790
Centisome position: 23.61
GC content: 52.24
Gene sequence:
>1026_bases ATGATTGGCAAAGAACGTTGCCTTAGACCTCCATCCTGCAGGGCGAAGGGCCTTCAGTTGCTGATCGAACGCGCTTCAAT ATGCGCGTTTGATGATTCAGCTGTTTTGAAGATTCTGATCATGGGGGGAACCCGATTTGTCGGCAAGCCTCTGGTTACTC GACTTCAGGCCCAAGGCCATGCGCTCACGTTATTCACACGAGGCCGCCATTCTTTACCAGATGGTGTGGAACATCTCAGT GGTGATCGAACCACTCCTGAGGGGCTGAGTCGTCTTCAAGGCCGAAGCTTCGATGTCATCGTCGACAGCTCAGGGCGCAA GCTTGAAGACAGTCAAAGGGTGGTGGCCTGTACAGGAGAGCCAAAGCATCGTTTCCTCTATGTCAGTTCCGCTGGCGTCT ATGCAGATTCCGAGGAGTGGCCACTGAATGAGGAGAGTGCAACCGACCCGAACAGTCGTCATGCCGGCAAGGCTCAGACC GAATCATGGCTGCTTCAGCAAGGAATTCCCTTTACCAGTTTCCGACCTACTTATATCTATGGTCCTGGTAATTACAACCC AATTGAACGTTGGTTTTTCGATCGTATCGTCCATAATCGACCGGTTCCTTTGCCACGAGATGGCACCACCATCACCCAAT TGGGGCATGTTGTTGATCTGGCTGATGCCATGGTTCGTTCCCTTGAGGTGGAGACAGCAACGAATCGCATTTACAACTGT TCCAGCAAGCGTGGTATCACCTTCAGGGGCTTGATTGCAGCGGCAGCAAGGGCTTGTGGCAAAGATCCAAATGCCGTTGA GCTTCGTTCTTTTGATCCTTCAGGCCTGAATCCCAAAGCTCGTAAGGCCTTCCCGCTAAGGCTGAGTCATTTCCTTACCG ATATCACCAGGGTGGAGCGGGAATTGGCATGGCAGCCACGCTTTGACCTTGAGACTGGCCTCGAAGATAGCTACTGCAAC GACTACTCCTTGAAGCCAACGGCTGAACCAGATTTCAGTGCCGATCAATCCTTGATCGGGGTTTGA
Upstream 100 bases:
>100_bases ATCAACGGGGTCCTCGCTGAAGCGAGTCACCTTCTCGTAGTCCCCCTGGTGAAGTCGCACGCACACGCTGTCCAGTAGGT CGATGGCTGGGATGATCTCC
Downstream 100 bases:
>100_bases TGTATGCCACCGCAGAGCTAAACGCCAGGATCAGAGATGGCCAGAACAACCACCAGCCCAGGTGCTGCATATTTAGGCAA AAGTTGTGGCTTCCCCAACT
Product: mRNA binding protein
Products: NA
Alternate protein names: Reductase; Nucleotide Sugar Epimerase; Isoflavone Reductase; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-Glucose 4 6-Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; UDP-Glucose 4-Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NADH-Ubiquinone Oxidoreductase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD-Dependent Protein; NAD Dependent Epimerase/Dehydratase Family
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGHALTLFTRGRHSLPDGVEHLS GDRTTPEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGEPKHRFLYVSSAGVYADSEEWPLNEESATDPNSRHAGKAQT ESWLLQQGIPFTSFRPTYIYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC SSKRGITFRGLIAAAARACGKDPNAVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVERELAWQPRFDLETGLEDSYCN DYSLKPTAEPDFSADQSLIGV
Sequences:
>Translated_341_residues MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGHALTLFTRGRHSLPDGVEHLS GDRTTPEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGEPKHRFLYVSSAGVYADSEEWPLNEESATDPNSRHAGKAQT ESWLLQQGIPFTSFRPTYIYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC SSKRGITFRGLIAAAARACGKDPNAVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVERELAWQPRFDLETGLEDSYCN DYSLKPTAEPDFSADQSLIGV >Mature_341_residues MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGHALTLFTRGRHSLPDGVEHLS GDRTTPEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGEPKHRFLYVSSAGVYADSEEWPLNEESATDPNSRHAGKAQT ESWLLQQGIPFTSFRPTYIYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC SSKRGITFRGLIAAAARACGKDPNAVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVERELAWQPRFDLETGLEDSYCN DYSLKPTAEPDFSADQSLIGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37902; Mature: 37902
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGH CCCCHHCCCCCCHHHHHHHHHHHHHHHEECCCHHEEEEEEECCCHHHCCHHHHHHHCCCC ALTLFTRGRHSLPDGVEHLSGDRTTPEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGE EEEEEECCCCCCCHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCC PKHRFLYVSSAGVYADSEEWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTYIY CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE GPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC SSKRGITFRGLIAAAARACGKDPNAVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVER CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHH ELAWQPRFDLETGLEDSYCNDYSLKPTAEPDFSADQSLIGV HHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGH CCCCHHCCCCCCHHHHHHHHHHHHHHHEECCCHHEEEEEEECCCHHHCCHHHHHHHCCCC ALTLFTRGRHSLPDGVEHLSGDRTTPEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGE EEEEEECCCCCCCHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCC PKHRFLYVSSAGVYADSEEWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTYIY CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE GPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC SSKRGITFRGLIAAAARACGKDPNAVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVER CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHH ELAWQPRFDLETGLEDSYCNDYSLKPTAEPDFSADQSLIGV HHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA