| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862762
Identifier: 33862762
GI number: 33862762
Start: 540541
End: 540954
Strand: Reverse
Name: 33862762
Synonym: PMT0489
Alternate gene names: NA
Gene position: 540954-540541 (Counterclockwise)
Preceding gene: 33862765
Following gene: 33862757
Centisome position: 22.44
GC content: 54.35
Gene sequence:
>414_bases ATGGCAAAGTGGTGGGGATTCAGCATCAGGTTGCTGATCTTGCCCTCACCATCAGACCCACAGCAGCCACGCAGGTTTCT TCCGCTCCCAAAGGGCTTGGTTGAGCTCTATGGGCTCATCGCAGTTCTAATGGTTGTCATTCCCGAGTGGCTTGCTGAGG TCAGCTTGAACATGGGAAACAGCACCAGCGAAGCTCAGCTTCCTATGAGGGCGCGCGCATGGAGAACGTTGCCAGAGCTG CAGTTGGCAGCAATGAACCTTTCTGAATTGAGACAGCTGGCGCATCAGCTCAAGCTATGGGGCTACGCGAGCGAAAGCCG TGATCAGCTATCAAGGCGACTCTTAAGGCGGCTGAGCAGAAGATTGCCTTCAAAACGAATTAGGTCGGCCAGTAGGCAAC GCAATACCCTGTGA
Upstream 100 bases:
>100_bases ACAGGGGAAAGAACCAGCTCTACAGTGGCGGGAGGCCCCAGAGCCAACCTCAGGGTCCTTACAGATCTAACCACCCCTGC CCATCTGAGCCCTTGTAGAA
Downstream 100 bases:
>100_bases TAACTTGCCTAAGCCGGGGCGTGGCGCAGCTTGGTAGCGCACTACTTTGGGGTAGTAGGGGTCGTGGGTTCAAATCCCGC CGCTCCGATTCCGGGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAKWWGFSIRLLILPSPSDPQQPRRFLPLPKGLVELYGLIAVLMVVIPEWLAEVSLNMGNSTSEAQLPMRARAWRTLPEL QLAAMNLSELRQLAHQLKLWGYASESRDQLSRRLLRRLSRRLPSKRIRSASRQRNTL
Sequences:
>Translated_137_residues MAKWWGFSIRLLILPSPSDPQQPRRFLPLPKGLVELYGLIAVLMVVIPEWLAEVSLNMGNSTSEAQLPMRARAWRTLPEL QLAAMNLSELRQLAHQLKLWGYASESRDQLSRRLLRRLSRRLPSKRIRSASRQRNTL >Mature_136_residues AKWWGFSIRLLILPSPSDPQQPRRFLPLPKGLVELYGLIAVLMVVIPEWLAEVSLNMGNSTSEAQLPMRARAWRTLPELQ LAAMNLSELRQLAHQLKLWGYASESRDQLSRRLLRRLSRRLPSKRIRSASRQRNTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15867; Mature: 15736
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKWWGFSIRLLILPSPSDPQQPRRFLPLPKGLVELYGLIAVLMVVIPEWLAEVSLNMGN CCCCCCCEEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC STSEAQLPMRARAWRTLPELQLAAMNLSELRQLAHQLKLWGYASESRDQLSRRLLRRLSR CCCHHHCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RLPSKRIRSASRQRNTL HCCHHHHHHHHHHCCCC >Mature Secondary Structure AKWWGFSIRLLILPSPSDPQQPRRFLPLPKGLVELYGLIAVLMVVIPEWLAEVSLNMGN CCCCCCEEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC STSEAQLPMRARAWRTLPELQLAAMNLSELRQLAHQLKLWGYASESRDQLSRRLLRRLSR CCCHHHCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RLPSKRIRSASRQRNTL HCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA