| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862757
Identifier: 33862757
GI number: 33862757
Start: 536528
End: 536884
Strand: Reverse
Name: 33862757
Synonym: PMT0484
Alternate gene names: NA
Gene position: 536884-536528 (Counterclockwise)
Preceding gene: 33862762
Following gene: 33862756
Centisome position: 22.27
GC content: 40.9
Gene sequence:
>357_bases GTGTACTGTCGAAAATCTAAAATGTTGGCTGAATTCAAAACTCTATTCGAGCTTAGCCAAGAAGGTTACTTTAAAAAGCT GATGGAATCAGCCAGAGAGGTATTAGATGTCCCAGTCAATACTTTTAGCAACAGCACAATTAGCAGTCAAATCGTGATTG GAATCATCGCAATTGTAATCCTGGGTGTTATCATTTTACCATTCGGAGCAACCGAAGCTTCGATCAAGGCTTGTCAAGTC AACACAGACAAAAAACTCGTCAAAGTTGGCGGCTCGGTAATCGTTGTAATGACCTCACTTAGCGCCATACTCTACCTCGA AGTTTTGAAGCTATATGGAGTGTTTAGCAGTAGCTAA
Upstream 100 bases:
>100_bases CATCGGCGATAGGAGATGAGTAGAAAGACCTATTGATCATTGCTTTATCTAACCACTGATTAACCTTTAAAACCACCATG CTTATGCCAGATTAAGCTGA
Downstream 100 bases:
>100_bases AGATTGAGACCTCCAACTGGCTAACGCGCGATTAAAATCCTTATATTTATCACTAGCCTTAGAGAATGCATGTCTTCTTA GGAATAAAAAGGTTGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MYCRKSKMLAEFKTLFELSQEGYFKKLMESAREVLDVPVNTFSNSTISSQIVIGIIAIVILGVIILPFGATEASIKACQV NTDKKLVKVGGSVIVVMTSLSAILYLEVLKLYGVFSSS
Sequences:
>Translated_118_residues MYCRKSKMLAEFKTLFELSQEGYFKKLMESAREVLDVPVNTFSNSTISSQIVIGIIAIVILGVIILPFGATEASIKACQV NTDKKLVKVGGSVIVVMTSLSAILYLEVLKLYGVFSSS >Mature_118_residues MYCRKSKMLAEFKTLFELSQEGYFKKLMESAREVLDVPVNTFSNSTISSQIVIGIIAIVILGVIILPFGATEASIKACQV NTDKKLVKVGGSVIVVMTSLSAILYLEVLKLYGVFSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12874; Mature: 12874
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCRKSKMLAEFKTLFELSQEGYFKKLMESAREVLDVPVNTFSNSTISSQIVIGIIAIVI CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH LGVIILPFGATEASIKACQVNTDKKLVKVGGSVIVVMTSLSAILYLEVLKLYGVFSSS HHHHHHCCCCCHHHHHHEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYCRKSKMLAEFKTLFELSQEGYFKKLMESAREVLDVPVNTFSNSTISSQIVIGIIAIVI CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH LGVIILPFGATEASIKACQVNTDKKLVKVGGSVIVVMTSLSAILYLEVLKLYGVFSSS HHHHHHCCCCCHHHHHHEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA