| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33862435
Identifier: 33862435
GI number: 33862435
Start: 185029
End: 185646
Strand: Reverse
Name: 33862435
Synonym: PMT0162
Alternate gene names: NA
Gene position: 185646-185029 (Counterclockwise)
Preceding gene: 33862436
Following gene: 33862434
Centisome position: 7.7
GC content: 44.5
Gene sequence:
>618_bases ATGACTGATTCAGCGATCGATTTCAAAGCCATCTCGCCAGATAGGCACAGTGCAGGGTCAGAGTCAATCGTACTTCCTGA GGCAATTACGGAAGGGTTGAATGACGTCCAGGTAGGTATCATGAGAGATACGGTTCATGCTGTCAATGTCAATTCAAGGA TTGCAGCAGAACTAGTTCGAAGCACTGCTGCTGAGCTCTATCGGCTTAAATGTGTTCTTAAGAAGCAACAACAATGGACA AGGTTCAGAGAATCTGGAGTCATTCCAATGACTGCAGGCCAGATTAGAGACCTAACTTCGGCATGGGAGTCATGGCTCAA GAATACAGATGTGACCGACCAAGAGCTGGTTGGCACTAGCATGCGAACGCTAGCAGCAATTGGGAAAGCTGATCCTGGAA CTCGAAGAGATGCCCTAGGTAAAATGAAACGAGGCGAAAAGGTTACAGAGAAAGAGGTCAGCGATAAAGCCATTGAGGAG TTGGTTGAAGGCAATAAGGAGTGGGAAATAACCACATCAATGAAAAGGGCAGACCTAATGAAAGTATGTACAGCTCTAAG AGATGAGAATAAAAAGCTAAAAGCTAAGATTAACGAATTGCAAGACGTTACAATTTAA
Upstream 100 bases:
>100_bases TCTGGGGGTGGACAAATGATGACCTGGCAAAGTAGTTCAAAAATACTCCATTTGAACGACTCGTTCAAATGCGCTAGGGT GTGGATAGCGGAGTGCCTTA
Downstream 100 bases:
>100_bases GAAAAACATGATGCCAAATACTCCTACGATTCAAGCTGCTCTTCACGAGCTAAACAAACAGATGAACGATCATTGCTTAA AGGATATTATAATAAATGGA
Product: regulatory proteins, Crp fa
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTDSAIDFKAISPDRHSAGSESIVLPEAITEGLNDVQVGIMRDTVHAVNVNSRIAAELVRSTAAELYRLKCVLKKQQQWT RFRESGVIPMTAGQIRDLTSAWESWLKNTDVTDQELVGTSMRTLAAIGKADPGTRRDALGKMKRGEKVTEKEVSDKAIEE LVEGNKEWEITTSMKRADLMKVCTALRDENKKLKAKINELQDVTI
Sequences:
>Translated_205_residues MTDSAIDFKAISPDRHSAGSESIVLPEAITEGLNDVQVGIMRDTVHAVNVNSRIAAELVRSTAAELYRLKCVLKKQQQWT RFRESGVIPMTAGQIRDLTSAWESWLKNTDVTDQELVGTSMRTLAAIGKADPGTRRDALGKMKRGEKVTEKEVSDKAIEE LVEGNKEWEITTSMKRADLMKVCTALRDENKKLKAKINELQDVTI >Mature_204_residues TDSAIDFKAISPDRHSAGSESIVLPEAITEGLNDVQVGIMRDTVHAVNVNSRIAAELVRSTAAELYRLKCVLKKQQQWTR FRESGVIPMTAGQIRDLTSAWESWLKNTDVTDQELVGTSMRTLAAIGKADPGTRRDALGKMKRGEKVTEKEVSDKAIEEL VEGNKEWEITTSMKRADLMKVCTALRDENKKLKAKINELQDVTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22829; Mature: 22698
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSAIDFKAISPDRHSAGSESIVLPEAITEGLNDVQVGIMRDTVHAVNVNSRIAAELVR CCCCCCCEEECCCCCCCCCCCCEECHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH STAAELYRLKCVLKKQQQWTRFRESGVIPMTAGQIRDLTSAWESWLKNTDVTDQELVGTS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH MRTLAAIGKADPGTRRDALGKMKRGEKVTEKEVSDKAIEELVEGNKEWEITTSMKRADLM HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH KVCTALRDENKKLKAKINELQDVTI HHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TDSAIDFKAISPDRHSAGSESIVLPEAITEGLNDVQVGIMRDTVHAVNVNSRIAAELVR CCCCCCEEECCCCCCCCCCCCEECHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH STAAELYRLKCVLKKQQQWTRFRESGVIPMTAGQIRDLTSAWESWLKNTDVTDQELVGTS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH MRTLAAIGKADPGTRRDALGKMKRGEKVTEKEVSDKAIEELVEGNKEWEITTSMKRADLM HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH KVCTALRDENKKLKAKINELQDVTI HHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA