| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is aroK [H]
Identifier: 33862436
GI number: 33862436
Start: 187847
End: 188425
Strand: Reverse
Name: aroK [H]
Synonym: PMT0163
Alternate gene names: 33862436
Gene position: 188425-187847 (Counterclockwise)
Preceding gene: 33862440
Following gene: 33862435
Centisome position: 7.82
GC content: 51.3
Gene sequence:
>579_bases ATGAACGAAAGCCCAGCCCCTCACCCCCTCAAGCAAAGGCTTGGTGGTCGCAACCTCTATTTGGTGGGAATGATGGCCAG TGGCAAGAGCAGCACAGGCAGGCCTCTAGCCGAACAACTCAGCTATGGGTTTGTTGATACAGATGCCGTCATCGAACAAC TTGCTGGCCAACCAATCCCGAAGATCTTTAGCGAAGAAGGAGAAGCAGGGTTTCGAACAATGGAGTCTCAAGTACTCAAT GCCATTGGCCAACGCCATTCACTTGTTGTTGCTACTGGCGGAGGGATAGTGAGTAAGCCAGAAAACTGGGGGGTCTTGCA TCAGGGCATCGTGATCTGGCTAAACCCTGGGCGAGAAGAGCTACTCAGACGCTTAAATGCCGACAGCGGCAATAGGCCTT TACTGCAAACAGAAGATCCAGAAGCAGCCTTCGACTGTTTATTTGCCGAGCGCCTACCGCTTTATTGCGAAGCAGACTTG CATGTGGAAGTGGGAGCAGAGGAACCAGACGGGATTGCGCTAAAGATTATTGAGTTCCTGCCCCAGTTATTATCGCCACC TCCACAAATGAATGGTTAA
Upstream 100 bases:
>100_bases ACAGCCGCGGCCATGACCATGGCGTTCCAAATCGGGGACGTCAGTCATCGCTCTCTCTGCCTAGAAGTCATCCTAGAGAT CTATAGACATTTGCGAACCA
Downstream 100 bases:
>100_bases AGCAACTATTTTGACAATACTGAAAGAATAGAATATTTAAGTACGGAGGGTTGGTCTGATAGCTAATCCCAATCAAAACA GACGATCCATCCTCAACTTG
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFSEEGEAGFRTMESQVLN AIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREELLRRLNADSGNRPLLQTEDPEAAFDCLFAERLPLYCEADL HVEVGAEEPDGIALKIIEFLPQLLSPPPQMNG
Sequences:
>Translated_192_residues MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFSEEGEAGFRTMESQVLN AIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREELLRRLNADSGNRPLLQTEDPEAAFDCLFAERLPLYCEADL HVEVGAEEPDGIALKIIEFLPQLLSPPPQMNG >Mature_192_residues MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFSEEGEAGFRTMESQVLN AIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREELLRRLNADSGNRPLLQTEDPEAAFDCLFAERLPLYCEADL HVEVGAEEPDGIALKIIEFLPQLLSPPPQMNG
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=167, Percent_Identity=39.5209580838323, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1786587, Length=170, Percent_Identity=31.1764705882353, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20863; Mature: 20863
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIP CCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCH KIFSEEGEAGFRTMESQVLNAIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREE HHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCEEEEECCCHHH LLRRLNADSGNRPLLQTEDPEAAFDCLFAERLPLYCEADLHVEVGAEEPDGIALKIIEFL HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCEEEEECCCCCCCHHHHHHHHH PQLLSPPPQMNG HHHHCCCCCCCC >Mature Secondary Structure MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIP CCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCH KIFSEEGEAGFRTMESQVLNAIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREE HHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCEEEEECCCHHH LLRRLNADSGNRPLLQTEDPEAAFDCLFAERLPLYCEADLHVEVGAEEPDGIALKIIEFL HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCEEEEECCCCCCCHHHHHHHHH PQLLSPPPQMNG HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA