| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862434
Identifier: 33862434
GI number: 33862434
Start: 183080
End: 183406
Strand: Reverse
Name: 33862434
Synonym: PMT0161
Alternate gene names: NA
Gene position: 183406-183080 (Counterclockwise)
Preceding gene: 33862435
Following gene: 33862428
Centisome position: 7.61
GC content: 36.09
Gene sequence:
>327_bases ATGGCCTTAACAAAGGATGGTGTTCTATCAAGTTGCCTGATACCTACCAACTGTGTGCTTATCGAATGGAAGTTTGATAA TGTAATGAAATCATACGACAAGCTTATTCGCATTGCCGAATCCCTGCCAAGGGTAAGAGTAGTAGAAAGAACAGAAAATT ATTGGCATGGTATTGTACGAAGCCTAATTTTTAGGTTTCCAGATGATCTTGAGATCCTAAAAATACCAAATAAAGGAATT ATTCAAGTCAGATCTGCTTCTAGACTAGGACTTGGAGATCTAGGTGTTAATAGAAACAGAATTGAAAATCTTTACTCGCA ATTATAA
Upstream 100 bases:
>100_bases TCGATATGATAAATTTAAAAGTGATGATGTATGAACCAATCTCTATCGGAATAACTCAACCCCTTCGTTCTCATCAACTA AATTCTAACTTTAACAACTA
Downstream 100 bases:
>100_bases ATGTATAAAGCCCTGAACTACAACTCAAATTGCCCCTTACACAAAACATCCTAGATCATAACAGCTATATATAATTATCT TAAACATATAGCAGGTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MALTKDGVLSSCLIPTNCVLIEWKFDNVMKSYDKLIRIAESLPRVRVVERTENYWHGIVRSLIFRFPDDLEILKIPNKGI IQVRSASRLGLGDLGVNRNRIENLYSQL
Sequences:
>Translated_108_residues MALTKDGVLSSCLIPTNCVLIEWKFDNVMKSYDKLIRIAESLPRVRVVERTENYWHGIVRSLIFRFPDDLEILKIPNKGI IQVRSASRLGLGDLGVNRNRIENLYSQL >Mature_107_residues ALTKDGVLSSCLIPTNCVLIEWKFDNVMKSYDKLIRIAESLPRVRVVERTENYWHGIVRSLIFRFPDDLEILKIPNKGII QVRSASRLGLGDLGVNRNRIENLYSQL
Specific function: Unknown
COG id: COG4446
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12444; Mature: 12313
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTKDGVLSSCLIPTNCVLIEWKFDNVMKSYDKLIRIAESLPRVRVVERTENYWHGIVR CCCCCCCCHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHH SLIFRFPDDLEILKIPNKGIIQVRSASRLGLGDLGVNRNRIENLYSQL HHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure ALTKDGVLSSCLIPTNCVLIEWKFDNVMKSYDKLIRIAESLPRVRVVERTENYWHGIVR CCCCCCCHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHH SLIFRFPDDLEILKIPNKGIIQVRSASRLGLGDLGVNRNRIENLYSQL HHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA