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The map label for this gene is 33862279

Identifier: 33862279

GI number: 33862279

Start: 8682

End: 9575

Strand: Reverse

Name: 33862279

Synonym: PMT0006

Alternate gene names: NA

Gene position: 9575-8682 (Counterclockwise)

Preceding gene: 33862280

Following gene: 33862278

Centisome position: 0.4

GC content: 51.01

Gene sequence:

>894_bases
ATGAAACTGAACCAGCCGCGATATAAACCGCTTAATGGCTGGCTCAGAGGAGCTGTTCTAGGGCTCATCACCACAATTGT
GGCAACACCTCCGACTCATGCCCTCATTCCCTACGTCTACGAGCCAAGTCCTCTTGAATTAAAAGGAGCCAGCCTCGGCA
TTGGACGCACAGCCGCCCAATTACTGCAACTGGGTCAACCAAAAGAGGCCGCGCTCTTGGCAGCACTTGCAGTCCGACTG
CAACCAGAAGATGAGCGTCTCTGGTCAATTTTTGCAGAAGCCCAACTACGCAGCGATCAACTTGATGCTGCAAGCCATTC
TCTAGCGCGAGCAAAAGAACTCAACCCCAAGAAAGCAGGCCTTTGGTTCGCTGAAGCTTCCCTTGCCCTGCGCGATAACC
GGCCTGCAGACGCCGTGAGCCTCCTCATCCAAGGTCTAGAACTCGACCCAAATAATGCTGGTGCTTACTTTGATCTAGGC
AACGCAAGAGTGATGCAAGCCAATCTTCAAATCGCTCTCGAAGCTTTTGAAAAGGCATCCGGCTTGCAGCCAACATTCTG
GGAAGCCGTTAACAACCAAGGAATCGTGTTGTTTGAAATGGGCAAAATCAAAGCTGCCATCAACCGCTGGCGGCGTGTAC
TACAAATCAAACGCAATGCTGAACCAATGCTTGCCCTTGCGGCTGCATTGAATCAAATCAACCCTGGCAACACAGAAGCA
CTCGCACTTGCCAACCAAGCCCTTGCAGAAAATCCAAATTACGTCTTACCAAGACACCAGAAAGAGCAGCTCTGGGGAGA
GCGCCTTCGCCAAGCCACTAGTCATTTACTGACAAACCCAAATCTACGATCAGCTGTGGAACGAGCTGAAGCCAATGCTG
ATACAAACCAATAG

Upstream 100 bases:

>100_bases
ATCTGCTCTGAAAAGAATCAAACCATGGATGTGGCGTCGAAATGCAGCCTCAACGCAAACCAACAAACCTCCTACGCTGC
ACAACAACTAAATCCATGGA

Downstream 100 bases:

>100_bases
GCACTGATCAACAATGCGGGTATCCGCTAAGTAGATCTGTAGGCTGAGCGCTTTAAGCCCTCTAATCCCATATCTGGATG
GCCGAGGAGCGCCTTCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR-Repeat Pilus Assembly Protein TadD; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Secreted Tetratricopeptide Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide TPR_2 Repeat Protein; Flp Pilus Assembly Protein TadD TPR Repeat Protein; Flp Pilus Assembly Protein TadD; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKLNQPRYKPLNGWLRGAVLGLITTIVATPPTHALIPYVYEPSPLELKGASLGIGRTAAQLLQLGQPKEAALLAALAVRL
QPEDERLWSIFAEAQLRSDQLDAASHSLARAKELNPKKAGLWFAEASLALRDNRPADAVSLLIQGLELDPNNAGAYFDLG
NARVMQANLQIALEAFEKASGLQPTFWEAVNNQGIVLFEMGKIKAAINRWRRVLQIKRNAEPMLALAAALNQINPGNTEA
LALANQALAENPNYVLPRHQKEQLWGERLRQATSHLLTNPNLRSAVERAEANADTNQ

Sequences:

>Translated_297_residues
MKLNQPRYKPLNGWLRGAVLGLITTIVATPPTHALIPYVYEPSPLELKGASLGIGRTAAQLLQLGQPKEAALLAALAVRL
QPEDERLWSIFAEAQLRSDQLDAASHSLARAKELNPKKAGLWFAEASLALRDNRPADAVSLLIQGLELDPNNAGAYFDLG
NARVMQANLQIALEAFEKASGLQPTFWEAVNNQGIVLFEMGKIKAAINRWRRVLQIKRNAEPMLALAAALNQINPGNTEA
LALANQALAENPNYVLPRHQKEQLWGERLRQATSHLLTNPNLRSAVERAEANADTNQ
>Mature_297_residues
MKLNQPRYKPLNGWLRGAVLGLITTIVATPPTHALIPYVYEPSPLELKGASLGIGRTAAQLLQLGQPKEAALLAALAVRL
QPEDERLWSIFAEAQLRSDQLDAASHSLARAKELNPKKAGLWFAEASLALRDNRPADAVSLLIQGLELDPNNAGAYFDLG
NARVMQANLQIALEAFEKASGLQPTFWEAVNNQGIVLFEMGKIKAAINRWRRVLQIKRNAEPMLALAAALNQINPGNTEA
LALANQALAENPNYVLPRHQKEQLWGERLRQATSHLLTNPNLRSAVERAEANADTNQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32557; Mature: 32557

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNQPRYKPLNGWLRGAVLGLITTIVATPPTHALIPYVYEPSPLELKGASLGIGRTAAQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECEEECCCCCEECCCCCCCHHHHHH
LLQLGQPKEAALLAALAVRLQPEDERLWSIFAEAQLRSDQLDAASHSLARAKELNPKKAG
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
LWFAEASLALRDNRPADAVSLLIQGLELDPNNAGAYFDLGNARVMQANLQIALEAFEKAS
EEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHC
GLQPTFWEAVNNQGIVLFEMGKIKAAINRWRRVLQIKRNAEPMLALAAALNQINPGNTEA
CCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHH
LALANQALAENPNYVLPRHQKEQLWGERLRQATSHLLTNPNLRSAVERAEANADTNQ
HHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLNQPRYKPLNGWLRGAVLGLITTIVATPPTHALIPYVYEPSPLELKGASLGIGRTAAQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECEEECCCCCEECCCCCCCHHHHHH
LLQLGQPKEAALLAALAVRLQPEDERLWSIFAEAQLRSDQLDAASHSLARAKELNPKKAG
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
LWFAEASLALRDNRPADAVSLLIQGLELDPNNAGAYFDLGNARVMQANLQIALEAFEKAS
EEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHC
GLQPTFWEAVNNQGIVLFEMGKIKAAINRWRRVLQIKRNAEPMLALAAALNQINPGNTEA
CCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHH
LALANQALAENPNYVLPRHQKEQLWGERLRQATSHLLTNPNLRSAVERAEANADTNQ
HHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA