Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is yjeS [H]

Identifier: 33862280

GI number: 33862280

Start: 9585

End: 10559

Strand: Reverse

Name: yjeS [H]

Synonym: PMT0007

Alternate gene names: 33862280

Gene position: 10559-9585 (Counterclockwise)

Preceding gene: 33862288

Following gene: 33862279

Centisome position: 0.44

GC content: 51.18

Gene sequence:

>975_bases
ATGGTTGTGAAAATCTGCGCCAACCAAGATCAACTCAGCCATGAGCTCAAAGAGCAAGCAAAAAAACAAGGTTTTGATCC
TGTAGGAATTGCCAGGTTCCCTGGTAGTGACCGACTCCAACTTCGCTCCGCTGCTCTACAGCGCTGGCTAAAAGCTGGTC
ATCAAGCCGACATGGCATGGATGGCCTCATCGCAAAGGCAACAGGCGGACCAACTACTCGAAGGGATGACAAGCCTGCTG
GCGGTAGGTCTGAACTACTTCGTAAATGTACAAAGAGCTCCAGGCAAATTATTAGTTGCTCGCTATGCATGGGGACGGGA
CTATCACCGAGTGATCAAGCAAAGGCTCCGAAGAGTAGGTCGCTGGCTTGAACAACAGCGACCTAACTGCCGCTGGAAAA
TCTGCGTAGATACCGCTCCATTACTCGACAAAGCCTGGGCAGAAGAGGCCGGTCTCGGTTGGATCGGCAAGCACAGCAAC
CTGATCAATACCCAGCGAGGTTCATGGATGGTGCTGGGTCATCTTCTTTGCAACGAACCACTCACCCCAGACCAACCCGC
CAAGTCCCTGTGCGGCAAATGCCAATCCTGTCTGGAGATATGTCCCACCGAAGCCATCACCGAACCTTTTGTGATCGATT
CACGTCGATGTCTGGCATACCACACAATCGAAAACCGCAACCCTGACTTACCAGAAAACATTGTGAGGTCCTTGGGGAAT
TGGGTCGCCGGATGTGACATCTGTCAAGACGTCTGCCCATGGAATCAACAATCTCTTCCCCATAGCAATGATCCTGATGT
ACAGCCTCGTGATTGGTTACTCAAGCTGACGCGCAATCAAGCCCTCTCATGGAGCGATACAACTTGGAGTGAACAATTAC
GCGGATCTGCTCTGAAAAGAATCAAACCATGGATGTGGCGTCGAAATGCAGCCTCAACGCAAACCAACAAACCTCCTACG
CTGCACAACAACTAA

Upstream 100 bases:

>100_bases
CCGAGCCAGCGCATCAAAGGAGTTAAACGACCGGCTGAACTTGATCCCAACTCAGAAGCAGGCAAGGCACGATGCCAAAA
GGTAATCAAGTGTACGGTTG

Downstream 100 bases:

>100_bases
ATCCATGGAATGAAACTGAACCAGCCGCGATATAAACCGCTTAATGGCTGGCTCAGAGGAGCTGTTCTAGGGCTCATCAC
CACAATTGTGGCAACACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAWMASSQRQQADQLLEGMTSLL
AVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVGRWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSN
LINTQRGSWMVLGHLLCNEPLTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN
WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKRIKPWMWRRNAASTQTNKPPT
LHNN

Sequences:

>Translated_324_residues
MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAWMASSQRQQADQLLEGMTSLL
AVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVGRWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSN
LINTQRGSWMVLGHLLCNEPLTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN
WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKRIKPWMWRRNAASTQTNKPPT
LHNN
>Mature_324_residues
MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAWMASSQRQQADQLLEGMTSLL
AVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVGRWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSN
LINTQRGSWMVLGHLLCNEPLTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN
WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKRIKPWMWRRNAASTQTNKPPT
LHNN

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=317, Percent_Identity=37.5394321766561, Blast_Score=222, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 36999; Mature: 36999

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAW
CEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH
MASSQRQQADQLLEGMTSLLAVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEHHHHCHHHHHHHHHHHHHHH
RWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSNLINTQRGSWMVLGHLLCNEP
HHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCC
LTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN
CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHH
WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
IKPWMWRRNAASTQTNKPPTLHNN
HHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVVKICANQDQLSHELKEQAKKQGFDPVGIARFPGSDRLQLRSAALQRWLKAGHQADMAW
CEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH
MASSQRQQADQLLEGMTSLLAVGLNYFVNVQRAPGKLLVARYAWGRDYHRVIKQRLRRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEHHHHCHHHHHHHHHHHHHHH
RWLEQQRPNCRWKICVDTAPLLDKAWAEEAGLGWIGKHSNLINTQRGSWMVLGHLLCNEP
HHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCC
LTPDQPAKSLCGKCQSCLEICPTEAITEPFVIDSRRCLAYHTIENRNPDLPENIVRSLGN
CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHH
WVAGCDICQDVCPWNQQSLPHSNDPDVQPRDWLLKLTRNQALSWSDTTWSEQLRGSALKR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
IKPWMWRRNAASTQTNKPPTLHNN
HHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]