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The map label for this gene is 32267216

Identifier: 32267216

GI number: 32267216

Start: 1642731

End: 1643171

Strand: Direct

Name: 32267216

Synonym: HH1717

Alternate gene names: NA

Gene position: 1642731-1643171 (Clockwise)

Preceding gene: 32267215

Following gene: 32267217

Centisome position: 91.31

GC content: 34.69

Gene sequence:

>441_bases
ATGGAGTATTTGTATATTAAAGTGTTGCATATTGTAGCGCTCATTTCGTGGATGGCAATGTTTTTTTATCTCCCACGATT
ATTTGTTTATCACGCGCAATATGCGGATAAATTGGAGTTTGTAGAAATTGTCAAGCTCCAAGAAATGCGGCTGTATAAAT
ATATTGGTTTGCCCGCATTAGTGCTTACTCTGCTTAGCGGAGGAGTGATGATAGCACTTAATCCTGCATTATTTAAAGTG
GCTGATTCTGGCTTGTGGCTTCATATTAAGCTTATATTTGTGCTTTTATTTGTGATTTATCATTTTGTATGTGGATATTT
TATTAAGACTTTAGATAAAGGCACTTGCACCAAAAGCCATACATTTTTTAGAATCTTTAATGAGATTCCCACACTTTTAG
TTATTGTGATTGTCTTTTTGGCAGTGTGTAAGCCATTTTAG

Upstream 100 bases:

>100_bases
GGGTTCAAGGAGAAAAGAAATACCTTGAAATGTTTAAAACAATGTATAATAACAACTTTGTTTTCATAGCAAATCCCAAA
TAAATTAAAGGAGCAAGGCA

Downstream 100 bases:

>100_bases
GAGATGATAAATGGCAAAATTATGGGGAGGACGCTTTGAATTAGATTCAAGCGCGCTTTTAGAGGAATTTAACGCTTCAA
TTTTCTTTGATAAGCAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MEYLYIKVLHIVALISWMAMFFYLPRLFVYHAQYADKLEFVEIVKLQEMRLYKYIGLPALVLTLLSGGVMIALNPALFKV
ADSGLWLHIKLIFVLLFVIYHFVCGYFIKTLDKGTCTKSHTFFRIFNEIPTLLVIVIVFLAVCKPF

Sequences:

>Translated_146_residues
MEYLYIKVLHIVALISWMAMFFYLPRLFVYHAQYADKLEFVEIVKLQEMRLYKYIGLPALVLTLLSGGVMIALNPALFKV
ADSGLWLHIKLIFVLLFVIYHFVCGYFIKTLDKGTCTKSHTFFRIFNEIPTLLVIVIVFLAVCKPF
>Mature_146_residues
MEYLYIKVLHIVALISWMAMFFYLPRLFVYHAQYADKLEFVEIVKLQEMRLYKYIGLPALVLTLLSGGVMIALNPALFKV
ADSGLWLHIKLIFVLLFVIYHFVCGYFIKTLDKGTCTKSHTFFRIFNEIPTLLVIVIVFLAVCKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 17006; Mature: 17006

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLYIKVLHIVALISWMAMFFYLPRLFVYHAQYADKLEFVEIVKLQEMRLYKYIGLPAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VLTLLSGGVMIALNPALFKVADSGLWLHIKLIFVLLFVIYHFVCGYFIKTLDKGTCTKSH
HHHHHCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
TFFRIFNEIPTLLVIVIVFLAVCKPF
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEYLYIKVLHIVALISWMAMFFYLPRLFVYHAQYADKLEFVEIVKLQEMRLYKYIGLPAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VLTLLSGGVMIALNPALFKVADSGLWLHIKLIFVLLFVIYHFVCGYFIKTLDKGTCTKSH
HHHHHCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
TFFRIFNEIPTLLVIVIVFLAVCKPF
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]