| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is yigZ [C]
Identifier: 32267215
GI number: 32267215
Start: 1642090
End: 1642713
Strand: Direct
Name: yigZ [C]
Synonym: HH1716
Alternate gene names: 32267215
Gene position: 1642090-1642713 (Clockwise)
Preceding gene: 32267214
Following gene: 32267216
Centisome position: 91.27
GC content: 37.5
Gene sequence:
>624_bases ATGAAAACTCTTGCCTCACAAGCAACAAAACAAATGCCAATACAAGCAATAGGCAGTTTTGAAAGCAAAGGTTCAAAGTT TCTAAGCTTTCTTTTTCCTTTTGCGCAATTTAATGAAAGCTTATCAAGTTTAAAAGAGCAGCACCCAAAGGCTGTGCATT TTGTGAGTGCGAGTAGGCATTATAATGAATATGGGCAGATTCTAGAATCTTTTGATGATGATAAAGAACCAAGGGGAAGT AGTGGCACGCCAAGTCTAAATGTATTGCGTGGAGAGGAGCTTGTTGAAGTAGGCGTGGTAATAGTGCGATATTTTGGTGG CACATTATTAGGTGTTGGCGGTTTGGTGAGAGCTTATACAAATGCAGTGCAAAATGCAATAGAATCTGCTAAAATGCAGG GATTACTCGTTGATTACATACACGCGGAGACTTTTGAGTTACAAATTGCTTATTCTGCACTTTCTGTATGCGAATATGAG GCTAAAAAGTTAGGATTATGTTTTGAAAAAGAGGCTTTTTTGCCCTTTGGCGTGCAAGTGAGGGTTCAAGGAGAAAAGAA ATACCTTGAAATGTTTAAAACAATGTATAATAACAACTTTGTTTTCATAGCAAATCCCAAATAA
Upstream 100 bases:
>100_bases AATTTTGGTTTGTGCGCTCTTTGGAGGGGGAATTTGTCATAGAAAAAGAGGGTAAAGAAATGCGTTTAAAAGGTGAGCAC GCAACTTATTATTTGCGCAG
Downstream 100 bases:
>100_bases ATTAAAGGAGCAAGGCAATGGAGTATTTGTATATTAAAGTGTTGCATATTGTAGCGCTCATTTCGTGGATGGCAATGTTT TTTTATCTCCCACGATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKTLASQATKQMPIQAIGSFESKGSKFLSFLFPFAQFNESLSSLKEQHPKAVHFVSASRHYNEYGQILESFDDDKEPRGS SGTPSLNVLRGEELVEVGVVIVRYFGGTLLGVGGLVRAYTNAVQNAIESAKMQGLLVDYIHAETFELQIAYSALSVCEYE AKKLGLCFEKEAFLPFGVQVRVQGEKKYLEMFKTMYNNNFVFIANPK
Sequences:
>Translated_207_residues MKTLASQATKQMPIQAIGSFESKGSKFLSFLFPFAQFNESLSSLKEQHPKAVHFVSASRHYNEYGQILESFDDDKEPRGS SGTPSLNVLRGEELVEVGVVIVRYFGGTLLGVGGLVRAYTNAVQNAIESAKMQGLLVDYIHAETFELQIAYSALSVCEYE AKKLGLCFEKEAFLPFGVQVRVQGEKKYLEMFKTMYNNNFVFIANPK >Mature_207_residues MKTLASQATKQMPIQAIGSFESKGSKFLSFLFPFAQFNESLSSLKEQHPKAVHFVSASRHYNEYGQILESFDDDKEPRGS SGTPSLNVLRGEELVEVGVVIVRYFGGTLLGVGGLVRAYTNAVQNAIESAKMQGLLVDYIHAETFELQIAYSALSVCEYE AKKLGLCFEKEAFLPFGVQVRVQGEKKYLEMFKTMYNNNFVFIANPK
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 23105; Mature: 23105
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLASQATKQMPIQAIGSFESKGSKFLSFLFPFAQFNESLSSLKEQHPKAVHFVSASRH CCCHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH YNEYGQILESFDDDKEPRGSSGTPSLNVLRGEELVEVGVVIVRYFGGTLLGVGGLVRAYT HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH NAVQNAIESAKMQGLLVDYIHAETFELQIAYSALSVCEYEAKKLGLCFEKEAFLPFGVQV HHHHHHHHHHHHHHHHHHHHHCHHEEEEHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEE RVQGEKKYLEMFKTMYNNNFVFIANPK EECCHHHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure MKTLASQATKQMPIQAIGSFESKGSKFLSFLFPFAQFNESLSSLKEQHPKAVHFVSASRH CCCHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH YNEYGQILESFDDDKEPRGSSGTPSLNVLRGEELVEVGVVIVRYFGGTLLGVGGLVRAYT HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH NAVQNAIESAKMQGLLVDYIHAETFELQIAYSALSVCEYEAKKLGLCFEKEAFLPFGVQV HHHHHHHHHHHHHHHHHHHHHCHHEEEEHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEE RVQGEKKYLEMFKTMYNNNFVFIANPK EECCHHHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]