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The map label for this gene is ubiD

Identifier: 32266859

GI number: 32266859

Start: 1316695

End: 1317288

Strand: Direct

Name: ubiD

Synonym: HH1360

Alternate gene names: 32266859

Gene position: 1316695-1317288 (Clockwise)

Preceding gene: 32266858

Following gene: 32266860

Centisome position: 73.18

GC content: 36.87

Gene sequence:

>594_bases
ATGAGAGGAATCAAGAAGCTTGTAGTTGCTATAGGAGGAGCGAGCGGGGTGCATTTAGGTTTAAAGTTTATTGAATGTGT
CCCAGATTCTATTGAATTGTTTGTGGTGGTGAGTGAAGGTGCAAAAGATGTTGCAAAGCACGAGCTTGATTATAATTTTA
AAGAACAGCTTTTTGCACTCAAACATAAAAGAGAGTTTTGTATTTATAATGAAAATGAAATGGATAGCCCAATAGCTTCG
GGTAGCTTTGGTATTGATGCTATGGCGGTTGTGCCAACAAGTATGAATCTTCTTGCTAAAATAGCTAATGGATTATGTGA
TGAGCTTATTTCACGATGTGCATCAGTGATGCTTAAAGAGAGACGAAAATTACTTTTGGCACCTCGTGAAATGCCTTTAA
GTCCTATTGCACTAGAGCAAATGAGTAAGCTTTCTTTGCTTGGCGTGATAATTGCCCCTCCAAGTGTAGGGTATTATGCT
AAGCCGAATGATTTAGAATCTATGGAGAGGTTTTTTATAGGAAAGTGGTTTGATGCACTTTGTATAGAAAATATACTTTA
TCAACGTTGGAAATATGATATAAAGGGGATTTAA

Upstream 100 bases:

>100_bases
TCATACGCGTAAAAATTACCGATGAAGGCAAGGGTGAAATTTTGTAAGTGGTAAGCGTATTGATGATGTGGTATGATGAT
TAAAAAATTTAGGAGAGTAT

Downstream 100 bases:

>100_bases
TGAGAACATTAGCCATTTATCCGGGCACTTTTGACCCTGTAACAAATGGGCATTTGGATATTATCAAACGTTCTATGGAG
ATTTTTGATAATGTAATTGT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRGIKKLVVAIGGASGVHLGLKFIECVPDSIELFVVVSEGAKDVAKHELDYNFKEQLFALKHKREFCIYNENEMDSPIAS
GSFGIDAMAVVPTSMNLLAKIANGLCDELISRCASVMLKERRKLLLAPREMPLSPIALEQMSKLSLLGVIIAPPSVGYYA
KPNDLESMERFFIGKWFDALCIENILYQRWKYDIKGI

Sequences:

>Translated_197_residues
MRGIKKLVVAIGGASGVHLGLKFIECVPDSIELFVVVSEGAKDVAKHELDYNFKEQLFALKHKREFCIYNENEMDSPIAS
GSFGIDAMAVVPTSMNLLAKIANGLCDELISRCASVMLKERRKLLLAPREMPLSPIALEQMSKLSLLGVIIAPPSVGYYA
KPNDLESMERFFIGKWFDALCIENILYQRWKYDIKGI
>Mature_197_residues
MRGIKKLVVAIGGASGVHLGLKFIECVPDSIELFVVVSEGAKDVAKHELDYNFKEQLFALKHKREFCIYNENEMDSPIAS
GSFGIDAMAVVPTSMNLLAKIANGLCDELISRCASVMLKERRKLLLAPREMPLSPIALEQMSKLSLLGVIIAPPSVGYYA
KPNDLESMERFFIGKWFDALCIENILYQRWKYDIKGI

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=192, Percent_Identity=31.25, Blast_Score=103, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6320746, Length=188, Percent_Identity=39.3617021276596, Blast_Score=125, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22015; Mature: 22015

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIKKLVVAIGGASGVHLGLKFIECVPDSIELFVVVSEGAKDVAKHELDYNFKEQLFAL
CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHH
KHKREFCIYNENEMDSPIASGSFGIDAMAVVPTSMNLLAKIANGLCDELISRCASVMLKE
HHCCCEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRKLLLAPREMPLSPIALEQMSKLSLLGVIIAPPSVGYYAKPNDLESMERFFIGKWFDAL
HHHHCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
CIENILYQRWKYDIKGI
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRGIKKLVVAIGGASGVHLGLKFIECVPDSIELFVVVSEGAKDVAKHELDYNFKEQLFAL
CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHH
KHKREFCIYNENEMDSPIASGSFGIDAMAVVPTSMNLLAKIANGLCDELISRCASVMLKE
HHCCCEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRKLLLAPREMPLSPIALEQMSKLSLLGVIIAPPSVGYYAKPNDLESMERFFIGKWFDAL
HHHHCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
CIENILYQRWKYDIKGI
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]