Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is flgA

Identifier: 32266858

GI number: 32266858

Start: 1315724

End: 1316641

Strand: Direct

Name: flgA

Synonym: HH1359

Alternate gene names: NA

Gene position: 1315724-1316641 (Clockwise)

Preceding gene: 32266857

Following gene: 32266859

Centisome position: 73.13

GC content: 33.99

Gene sequence:

>918_bases
ATGAAACAATTTTTTCTTTTTTTTGTCATTTTTGCGAATATAAATCTAATCGCAGATGATATTTCTATCCCTCCATCTAA
ACTCTCATTGCAAAAGAGCTATCAAGTGAGCAAAAATAATATTTATTCAACAGATATATTTCCTCAAATAGATAAGCGTT
TTAAGATTGCTACTCTACCTCCTGATAAATTCACTCTTAAACTTAAAAGTGTAGATATAAAGCTTATTTTTGCGCGCTAT
GGATATGAGATTAGCTCTTTTGAGAGTGAATTTGTAGAATTTAATTTTGTAAGTGATATGCGCGAAGATAAGGCATTGGA
TTTTATACAAAAAATGTATATTCAACATTATGGTAAAAGTCTCGAGATAAAAAAGCTACTCGTGCGTCCAATAGGCGTAT
TGCCACAACAATATGAATTACTTGAGTATGAATTAGCACCTCCTGCATTAAAAAAAAACAACGGCACTTTTGTGATGAAG
TATCGCACTGGAGAGCATTCACATATCAAAAAAATCACTTTTGCTTATATGCTTGAAGGAACGCTTGAAGTGCTTAAAAG
CACGCAAAATATTAATGTTAATGATACTTTAACACCGCAAAATACGCGCGCAGAGCGTATCACTTTTGAGCGAGTAGGTG
CAGAATACATTAGCACACAAGAGATTTATAATAGTGGAGCGAAGAGCTATATTCGCGTAGATACAGCTATTACAAAAGAT
AAAATCAAGCCAAGAATCATCGTAAAAAAAGGAGATAAGATTCGTGTCTTTAGTCGTGAAGGTGGTATTACAACGGAAAT
AGTCCTTGTGGCAAGACAAAATGCCGTGCACAATGAAATTATTAATGCCCAAAATCCAAATAGCGGGAAAATCATACGCG
TAAAAATTACCGATGAAGGCAAGGGTGAAATTTTGTAA

Upstream 100 bases:

>100_bases
TAGAATCTATAAAGGGTAAGGGAAGTCAGTGTCAGCTTAGGATTAATTTTTCCGGATTAGAGCGCGTGATTCTAGCTTCA
TTTGTGCAAAAGGTATGCGA

Downstream 100 bases:

>100_bases
GTGGTAAGCGTATTGATGATGTGGTATGATGATTAAAAAATTTAGGAGAGTATATGAGAGGAATCAAGAAGCTTGTAGTT
GCTATAGGAGGAGCGAGCGG

Product: flagellar basal body P-ring biosynthesis protein FlgA

Products: NA

Alternate protein names: Flagellar Basal Body P-Ring Biosynthesis Protein

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLPPDKFTLKLKSVDIKLIFARY
GYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKSLEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMK
YRTGEHSHIKKITFAYMLEGTLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD
KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL

Sequences:

>Translated_305_residues
MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLPPDKFTLKLKSVDIKLIFARY
GYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKSLEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMK
YRTGEHSHIKKITFAYMLEGTLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD
KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL
>Mature_305_residues
MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLPPDKFTLKLKSVDIKLIFARY
GYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKSLEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMK
YRTGEHSHIKKITFAYMLEGTLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD
KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL

Specific function: Unknown

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35047; Mature: 35047

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLP
CCHHEEEEEEHHCCEEEEECCCCCCCHHHHHHHHEECCCCEEECCCCCCCCCCEEEEECC
PDKFTLKLKSVDIKLIFARYGYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKS
CCCEEEEEEECEEEEEEEECCCCHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
LEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMKYRTGEHSHIKKITFAYMLEG
CHHHHHHHHHHCCCCCHHHHEEEECCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHH
TLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD
HHHHHHCCCCCCCCCCCCCCCCCHHEEEHHHHCHHHHHHHHHHCCCCCEEEEEEEEEHHC
KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEG
CCCCEEEEECCCEEEEEECCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCEEEEEECCCC
KGEIL
CCCCC
>Mature Secondary Structure
MKQFFLFFVIFANINLIADDISIPPSKLSLQKSYQVSKNNIYSTDIFPQIDKRFKIATLP
CCHHEEEEEEHHCCEEEEECCCCCCCHHHHHHHHEECCCCEEECCCCCCCCCCEEEEECC
PDKFTLKLKSVDIKLIFARYGYEISSFESEFVEFNFVSDMREDKALDFIQKMYIQHYGKS
CCCEEEEEEECEEEEEEEECCCCHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
LEIKKLLVRPIGVLPQQYELLEYELAPPALKKNNGTFVMKYRTGEHSHIKKITFAYMLEG
CHHHHHHHHHHCCCCCHHHHEEEECCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHH
TLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYISTQEIYNSGAKSYIRVDTAITKD
HHHHHHCCCCCCCCCCCCCCCCCHHEEEHHHHCHHHHHHHHHHCCCCCEEEEEEEEEHHC
KIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEG
CCCCEEEEECCCEEEEEECCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCEEEEEECCCC
KGEIL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA