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The map label for this gene is yhdH [H]

Identifier: 32266386

GI number: 32266386

Start: 864254

End: 865507

Strand: Direct

Name: yhdH [H]

Synonym: HH0887

Alternate gene names: 32266386

Gene position: 864254-865507 (Clockwise)

Preceding gene: 32266376

Following gene: 32266392

Centisome position: 48.04

GC content: 34.29

Gene sequence:

>1254_bases
ATGCTTTTAGCTGAAATGCTACTTGGCAATAAAGCACGAAGTAATCCTATGGATAATTATGTCGTGCTTCACACATTAAA
CTCTCTTCCTCTCAATACTGCACAAAATGAACATAATTATATTAATAAAGATTCAAACAAATCACTTATGTGGCTTGGGA
TAAATGCAATAGCAGGTCCTATAATACTAAGCTTTTATGCAGTAGTGCTAGGCTGGATTATATATTATTTAATATTTGTC
AGTTTTCATCTTCCAAACAATCTTAATCAAGCAAAAGCTATTTTTGATGAGATAAGAGCTCATTCTCTTCTGTATCAAAC
GCTTTGTTTTGGCATCATCATTGCACTTACTGCTTTTATAGTAGCGCGGGGAATTAAACGTGGGATTGAACGACTTAATC
TTATACTTATGCCTCTTTTGTTTTTAATATTCATCGGGCTTTTATTATATGCGATGACTTTACCAGAGTTTGAAAAAGCG
TGGCATTTTATGTTTAATTTCCAACCTCACAATATGAGCGCAAAAACCATTTTAGATTCTCTAGGGCAAGTGTTTTTCTC
ACTCTCACTCGGAGTAGGTACAATCGCAGTATATGCAGCAAGTGCGCAGCAAAATGAAAATCTCTTTAAAAGCGCTTTAT
GGGTGGTGATAAGTGGTATTATTGTCTCAATTATAGCTGGATTGATGATTTTTACTTTTATCTATCATTTTCAAGGGCAA
CCAAGTCAAGGTCCCGGGCTTCTACTCGTTTCGCTTCCGTTAGCATTTCAAACTTTAGGCGAGAGTGGTAAAATAATCAG
TATGCTATTTTTCATAGCCATACTTTTTGCTGGGATTACTTCTACAATTTCTATGCTTGAGCCGGGTGTAAGTATCTTGC
GAGATAAATTTACTTTCTCTCAAGCAAAAGCTTCGTATTTATTAAGTTTTGGTGTTTTTATTCTTGGCTTTTTAGTTATT
TTATGGGCAAATGATGAAATATCACTCCCAAGCATATTTGGCAAAAGACTTTTTGATACACTTGAATTCATTACTTCATC
ATTTCTAATGCCCTTAGGTATGCTTATCACACTTGTTTTTTTAGGCTGGGGCATTAAAAAGGCATATTTGAGGCATTGGA
CAGGTTATTTAAATAACACACTCTTTGAAATATGGCATAAGATTATTTGTATCATTGCCCCAAGCGTTATTCTCATCATC
TTGCTCTCACAATATATAGATATTATCGGGTTTATTAATAGCATATTTGTATAA

Upstream 100 bases:

>100_bases
GCTAGGACATATATGGAGATTTCCCTATATGGCTGGAGAAAACGGCGGTAGTGCATTTGTTATTTTTTATCTTATTCTCT
CAATATGTATTGGAGTGCCT

Downstream 100 bases:

>100_bases
AGCATTATTTACAACAGAGTTTGGCAAATTCTTCAAAAAGAATGCGTGCTTCTCTTGGTCCTGGACTTGCCTCTGGGTGA
TGTTGCACTGAAAATATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLLAEMLLGNKARSNPMDNYVVLHTLNSLPLNTAQNEHNYINKDSNKSLMWLGINAIAGPIILSFYAVVLGWIIYYLIFV
SFHLPNNLNQAKAIFDEIRAHSLLYQTLCFGIIIALTAFIVARGIKRGIERLNLILMPLLFLIFIGLLLYAMTLPEFEKA
WHFMFNFQPHNMSAKTILDSLGQVFFSLSLGVGTIAVYAASAQQNENLFKSALWVVISGIIVSIIAGLMIFTFIYHFQGQ
PSQGPGLLLVSLPLAFQTLGESGKIISMLFFIAILFAGITSTISMLEPGVSILRDKFTFSQAKASYLLSFGVFILGFLVI
LWANDEISLPSIFGKRLFDTLEFITSSFLMPLGMLITLVFLGWGIKKAYLRHWTGYLNNTLFEIWHKIICIIAPSVILII
LLSQYIDIIGFINSIFV

Sequences:

>Translated_417_residues
MLLAEMLLGNKARSNPMDNYVVLHTLNSLPLNTAQNEHNYINKDSNKSLMWLGINAIAGPIILSFYAVVLGWIIYYLIFV
SFHLPNNLNQAKAIFDEIRAHSLLYQTLCFGIIIALTAFIVARGIKRGIERLNLILMPLLFLIFIGLLLYAMTLPEFEKA
WHFMFNFQPHNMSAKTILDSLGQVFFSLSLGVGTIAVYAASAQQNENLFKSALWVVISGIIVSIIAGLMIFTFIYHFQGQ
PSQGPGLLLVSLPLAFQTLGESGKIISMLFFIAILFAGITSTISMLEPGVSILRDKFTFSQAKASYLLSFGVFILGFLVI
LWANDEISLPSIFGKRLFDTLEFITSSFLMPLGMLITLVFLGWGIKKAYLRHWTGYLNNTLFEIWHKIICIIAPSVILII
LLSQYIDIIGFINSIFV
>Mature_417_residues
MLLAEMLLGNKARSNPMDNYVVLHTLNSLPLNTAQNEHNYINKDSNKSLMWLGINAIAGPIILSFYAVVLGWIIYYLIFV
SFHLPNNLNQAKAIFDEIRAHSLLYQTLCFGIIIALTAFIVARGIKRGIERLNLILMPLLFLIFIGLLLYAMTLPEFEKA
WHFMFNFQPHNMSAKTILDSLGQVFFSLSLGVGTIAVYAASAQQNENLFKSALWVVISGIIVSIIAGLMIFTFIYHFQGQ
PSQGPGLLLVSLPLAFQTLGESGKIISMLFFIAILFAGITSTISMLEPGVSILRDKFTFSQAKASYLLSFGVFILGFLVI
LWANDEISLPSIFGKRLFDTLEFITSSFLMPLGMLITLVFLGWGIKKAYLRHWTGYLNNTLFEIWHKIICIIAPSVILII
LLSQYIDIIGFINSIFV

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI289191353, Length=248, Percent_Identity=24.5967741935484, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI289191351, Length=248, Percent_Identity=24.5967741935484, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI4557046, Length=248, Percent_Identity=24.5967741935484, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI289191377, Length=248, Percent_Identity=24.5967741935484, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI19921352, Length=227, Percent_Identity=29.0748898678414, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24584353, Length=227, Percent_Identity=29.0748898678414, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281365034, Length=227, Percent_Identity=29.0748898678414, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24661428, Length=312, Percent_Identity=24.0384615384615, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45551088, Length=316, Percent_Identity=26.2658227848101, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652942, Length=316, Percent_Identity=26.2658227848101, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 46731; Mature: 46731

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]