| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is fur
Identifier: 32266392
GI number: 32266392
Start: 870931
End: 871392
Strand: Direct
Name: fur
Synonym: HH0893
Alternate gene names: 32266392
Gene position: 870931-871392 (Clockwise)
Preceding gene: 32266386
Following gene: 32266398
Centisome position: 48.41
GC content: 34.85
Gene sequence:
>462_bases ATGAATATGAATGCAAATCATCGCGTGGAAACACTAGATTCTATACTTGAAAGGTTAAGAAGCTCAATTAAAAAAAATGG GCTTAAAAATTCTAAACAACGCGAAGAAATCATTGCTGTGCTATATAAAAGTGGTACACATCTTAGCCCTGAAGAGATTA CTAATATTATCAAAACAACTGATAAAAATGCAAGTATCTCCTCTGTATATAGAATCCTAAGCTTCCTTGAAAAAGAGGGA TTTATTACTGCTCTTGAGGCTGATAAAAGTGGAAGACGCTATGAAATTGCTGCCAAAGAACATCACGACCATATTATTTG TTTAGCTTGTGGCGACATTATAGAGTTTGTAGATGCAGATATTGAACGTTTGCAACTTGATATTGCACAACAATTTGGCG CAAAACTCATCAGCCACGATATGAGATTATTTGTCAAATGCTCGAAATGTCAAGGACTCTAA
Upstream 100 bases:
>100_bases TATTTAATGATAAGCTTTCTTATTTGCATTTTTGTATTTTGTTGCTATAATCCTGCATAAAATAAGAATCGCAATCCTAA AAGCGCAACAAGGAGCGTAT
Downstream 100 bases:
>100_bases AGGTTTAATTAAAAACTAAAATTCATTTGTGTATAATCACGCTTTGCTAAAACTTAAGCAATAAAGGACGTGTAGCTCAG CTGGTAGAGCAACTGACTCT
Product: ferric uptake regulation protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MNMNANHRVETLDSILERLRSSIKKNGLKNSKQREEIIAVLYKSGTHLSPEEITNIIKTTDKNASISSVYRILSFLEKEG FITALEADKSGRRYEIAAKEHHDHIICLACGDIIEFVDADIERLQLDIAQQFGAKLISHDMRLFVKCSKCQGL
Sequences:
>Translated_153_residues MNMNANHRVETLDSILERLRSSIKKNGLKNSKQREEIIAVLYKSGTHLSPEEITNIIKTTDKNASISSVYRILSFLEKEG FITALEADKSGRRYEIAAKEHHDHIICLACGDIIEFVDADIERLQLDIAQQFGAKLISHDMRLFVKCSKCQGL >Mature_153_residues MNMNANHRVETLDSILERLRSSIKKNGLKNSKQREEIIAVLYKSGTHLSPEEITNIIKTTDKNASISSVYRILSFLEKEG FITALEADKSGRRYEIAAKEHHDHIICLACGDIIEFVDADIERLQLDIAQQFGAKLISHDMRLFVKCSKCQGL
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=130, Percent_Identity=32.3076923076923, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17345; Mature: 17345
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMNANHRVETLDSILERLRSSIKKNGLKNSKQREEIIAVLYKSGTHLSPEEITNIIKTT CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHC DKNASISSVYRILSFLEKEGFITALEADKSGRRYEIAAKEHHDHIICLACGDIIEFVDAD CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHH IERLQLDIAQQFGAKLISHDMRLFVKCSKCQGL HHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCC >Mature Secondary Structure MNMNANHRVETLDSILERLRSSIKKNGLKNSKQREEIIAVLYKSGTHLSPEEITNIIKTT CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHC DKNASISSVYRILSFLEKEGFITALEADKSGRRYEIAAKEHHDHIICLACGDIIEFVDAD CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHH IERLQLDIAQQFGAKLISHDMRLFVKCSKCQGL HHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]