| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266376
Identifier: 32266376
GI number: 32266376
Start: 854244
End: 854972
Strand: Direct
Name: 32266376
Synonym: HH0877
Alternate gene names: NA
Gene position: 854244-854972 (Clockwise)
Preceding gene: 32266375
Following gene: 32266386
Centisome position: 47.48
GC content: 32.51
Gene sequence:
>729_bases TTGGTATTAAGCAATAAAATGCTAAAGATTCTAAAAGATAGTCTTAATGATTTTTTTACCCTAAAGATTATAAATCTTAT TTGGGTGCCTTTAATCTTGAATCTTTTGCTTATAGGTAGTGTGCTCTATTTTTGTGGCTCTTACTTTTATGATTTTATTC TCTCTCTTACGCCTAAGTGGCTTCAAGACATCAATGCAAACACTGCTCTTTGGGCACAAGCAGTGAGCTTTATATATAGT GTGAGTATATATCTTATCTTGGGTTTGGGCGTTGCTCTCCTTGCTTTGCTATGCAACCTGTTTTTTTCATTGTTTTATAC ACCTTTAATCGTGCGATATGTGCATAATAAAGATTTTTCTTTTATCAAACTTAATCCCTTTGGTTCAATGTGGGGTGATA CTCTAAGTTTTGTTAAAGATTTGTGTATGTTTATAGCACTTCTTATAGTTTGTATTCCTCTATATTTTATCCCTATATGT GGCACATTCATACCCTTGATAATTGGGTTTTTCTTTTTTAAAAGACGCACCTTTTATGATGTAGGAAGTTACATAATGGA TAAAGCACAATTTGATGCTCTACAATCCCAAAAGTTCCAAAACTATATTTGCGCACTTCTTAGCTTTCTCCCTAGCTTAA TTCCTTTTGTTAGCTTTTTTCTTATGCCATTGCAGATTCTTATCATTACGCGATATATGTTTGACAAATTACACTCTCAT ACTTCTTAA
Upstream 100 bases:
>100_bases AGTCTTGATGAGGAAATGGTAAATCTTATTAAATTTCAAGGTGGTTATGCAGCAAATGCTAAAGTGATTACAACTATTGA TAGAATGATAGAGACCCTAC
Downstream 100 bases:
>100_bases TTAGACTTAAATATGTTTAAATGACGAGAATAAAGAATAGGATATGATGCACACTTAGATTCTAAATTAGAGACTATACG TTTATTTGATACAATGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MVLSNKMLKILKDSLNDFFTLKIINLIWVPLILNLLLIGSVLYFCGSYFYDFILSLTPKWLQDINANTALWAQAVSFIYS VSIYLILGLGVALLALLCNLFFSLFYTPLIVRYVHNKDFSFIKLNPFGSMWGDTLSFVKDLCMFIALLIVCIPLYFIPIC GTFIPLIIGFFFFKRRTFYDVGSYIMDKAQFDALQSQKFQNYICALLSFLPSLIPFVSFFLMPLQILIITRYMFDKLHSH TS
Sequences:
>Translated_242_residues MVLSNKMLKILKDSLNDFFTLKIINLIWVPLILNLLLIGSVLYFCGSYFYDFILSLTPKWLQDINANTALWAQAVSFIYS VSIYLILGLGVALLALLCNLFFSLFYTPLIVRYVHNKDFSFIKLNPFGSMWGDTLSFVKDLCMFIALLIVCIPLYFIPIC GTFIPLIIGFFFFKRRTFYDVGSYIMDKAQFDALQSQKFQNYICALLSFLPSLIPFVSFFLMPLQILIITRYMFDKLHSH TS >Mature_242_residues MVLSNKMLKILKDSLNDFFTLKIINLIWVPLILNLLLIGSVLYFCGSYFYDFILSLTPKWLQDINANTALWAQAVSFIYS VSIYLILGLGVALLALLCNLFFSLFYTPLIVRYVHNKDFSFIKLNPFGSMWGDTLSFVKDLCMFIALLIVCIPLYFIPIC GTFIPLIIGFFFFKRRTFYDVGSYIMDKAQFDALQSQKFQNYICALLSFLPSLIPFVSFFLMPLQILIITRYMFDKLHSH TS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28015; Mature: 28015
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSNKMLKILKDSLNDFFTLKIINLIWVPLILNLLLIGSVLYFCGSYFYDFILSLTPKW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LQDINANTALWAQAVSFIYSVSIYLILGLGVALLALLCNLFFSLFYTPLIVRYVHNKDFS HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FIKLNPFGSMWGDTLSFVKDLCMFIALLIVCIPLYFIPICGTFIPLIIGFFFFKRRTFYD EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSYIMDKAQFDALQSQKFQNYICALLSFLPSLIPFVSFFLMPLQILIITRYMFDKLHSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TS CC >Mature Secondary Structure MVLSNKMLKILKDSLNDFFTLKIINLIWVPLILNLLLIGSVLYFCGSYFYDFILSLTPKW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LQDINANTALWAQAVSFIYSVSIYLILGLGVALLALLCNLFFSLFYTPLIVRYVHNKDFS HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FIKLNPFGSMWGDTLSFVKDLCMFIALLIVCIPLYFIPICGTFIPLIIGFFFFKRRTFYD EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSYIMDKAQFDALQSQKFQNYICALLSFLPSLIPFVSFFLMPLQILIITRYMFDKLHSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA