| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is tatA
Identifier: 32266207
GI number: 32266207
Start: 687718
End: 687966
Strand: Direct
Name: tatA
Synonym: HH0708
Alternate gene names: 32266207
Gene position: 687718-687966 (Clockwise)
Preceding gene: 32266206
Following gene: 32266208
Centisome position: 38.22
GC content: 30.92
Gene sequence:
>249_bases ATGCACCCCCCTAGTATTACACAATTGTTGATTATTTTGCTTATTATTGTGCTCCTTTTTGGTGCAAAAAAAATTCCCGA ACTTGCAAAAGGATTAGGAAGTGGTATTAAAAACTTCAAAAAAGCTGTCAAAGAAGATGAAGAAGATAATCAAAGTGAAG AAAATACAAAATCTCAAATCAAACAAAGCGAATCTAAAAATGAGAATGTATCAAAAACTCACACAGATTCTCAAAAACAA GACACTTAA
Upstream 100 bases:
>100_bases TTTGAGTAAGATTATCCAAAAATGGTAAGATTGAACGATAAGTTTAAGATTTAAAGACGAGTTTTGGTATAATACCTCAA TTTTTATCAAAGGAGATTCT
Downstream 100 bases:
>100_bases TGCACCACCATATCAAAGCTCTTCTCCAAAGTGCATTGAATATTAAAAACACAATTGACATTGTGCTTGAGAGACCAAAA AACAAAGACTTGGGGCATTT
Product: component of Sec-independent protein secretion pathway TatA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MHPPSITQLLIILLIIVLLFGAKKIPELAKGLGSGIKNFKKAVKEDEEDNQSEENTKSQIKQSESKNENVSKTHTDSQKQ DT
Sequences:
>Translated_82_residues MHPPSITQLLIILLIIVLLFGAKKIPELAKGLGSGIKNFKKAVKEDEEDNQSEENTKSQIKQSESKNENVSKTHTDSQKQ DT >Mature_82_residues MHPPSITQLLIILLIIVLLFGAKKIPELAKGLGSGIKNFKKAVKEDEEDNQSEENTKSQIKQSESKNENVSKTHTDSQKQ DT
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_HELHP (Q7VIA0)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860239.1 - GeneID: 1493762 - GenomeReviews: AE017125_GR - KEGG: hhe:HH0708 - NMPDR: fig|235279.1.peg.708 - HOGENOM: HBG751935 - OMA: NSATVHE - BioCyc: HHEP235279:HH_0708-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 9132; Mature: 9132
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb7f4140)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPPSITQLLIILLIIVLLFGAKKIPELAKGLGSGIKNFKKAVKEDEEDNQSEENTKSQI CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH KQSESKNENVSKTHTDSQKQDT HHHHHCCCCCCHHCCCCCCCCH >Mature Secondary Structure MHPPSITQLLIILLIIVLLFGAKKIPELAKGLGSGIKNFKKAVKEDEEDNQSEENTKSQI CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH KQSESKNENVSKTHTDSQKQDT HHHHHCCCCCCHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12810954