Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266121

Identifier: 32266121

GI number: 32266121

Start: 600012

End: 600998

Strand: Direct

Name: 32266121

Synonym: HH0622

Alternate gene names: NA

Gene position: 600012-600998 (Clockwise)

Preceding gene: 32266120

Following gene: 32266122

Centisome position: 33.35

GC content: 30.6

Gene sequence:

>987_bases
ATGAATGAACCTAGAGATTTAAAATCCGTTAAGGCATTTTTACTGCGACACGGACATACCAAAGAAGAAATAGAGCGTCT
TGATAAAGAAAGCGTTATAAATCTATATGAAAAGGATACTCGCAAAAATACGCTTAATTTTTTACACTATATGAACGAAG
ATACTTTCTCAGTAATAAGCACGCTTGATGAAGCTGATATTGGTGAATTTAAACTCAAAGTGCAAGAAAATTTAGATAAT
ATGGCTATTCTTGTTGATATTATTAGAGATGGTTTTAATGATTTTAGTTATGCCGATATTGCTGATACTTTGACTTTAAA
TATTAAAAATATCTCTATCCACAAACTTCAAAGAATCTTGCGTATTGCTTATCGCGAGTTCCAAGAAATTCTCCTTGATA
AAATCGCCACACAGCTTAAAGAATTGCCCATTGAAGAATATAAAACAATAATGAATCATTATGAAAGCATTCGCGGTGAT
ACTGCTCGTCTTAGAAGCACTATTCAGGAGCTTTCTGATGAAAAAAAGCGACAGCAAATTCTAGATATGGCACGTTTTAA
ACTTCTTATTGTAAAAGATTTTATGTCAAAAAATACTTTTAATGATGTTTATAAAGAGTATCTTAATAATACTCCTGAAA
AGCTTAAGCTTGTGGAAGATATCCTCATTCTTACAGGTATGTATTCCAAAAATTATCTCAAAAACGTTCCTATGGAAGAA
CTTGAAGATATGAAAGCAAAACTTCTTGAACATAAACGACAAGATGAAAGAGACCATAAAATATTTACTCAATACACTCA
AATGCTTGATGAATCTATGTATGGCTCTAATGAACAAGAATTTAGCGATGTGTGTGTAAAAATTATTACAGGACTTAATC
AAAAACAGATTCTAATGATAAGTGATTATTTAAGCGCAAAAAATCCAGTCTTTGTCAATCGTTTTAACACACTTTTGCGA
GATTTTAAAAATAGCCTAAAAAATTAA

Upstream 100 bases:

>100_bases
TTGCGCTACATCTTTTTGCCTTACAAAATGGAGCAAGTATTTTGCGCATACACGATGAAGATGAGCATATTGATATGCTT
AAAATGTATAAGGCGATGCA

Downstream 100 bases:

>100_bases
AATATAAATCATAAAAAAATGAAAAATACACTATAATAAACCCTCACAAAATCAAACAAGGATTGTAAATAATGAAGTAT
CTGTGCGCTTTTCTGCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVISTLDEADIGEFKLKVQENLDN
MAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRILRIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGD
TARLRSTIQELSDEKKRQQILDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE
LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMISDYLSAKNPVFVNRFNTLLR
DFKNSLKN

Sequences:

>Translated_328_residues
MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVISTLDEADIGEFKLKVQENLDN
MAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRILRIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGD
TARLRSTIQELSDEKKRQQILDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE
LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMISDYLSAKNPVFVNRFNTLLR
DFKNSLKN
>Mature_328_residues
MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVISTLDEADIGEFKLKVQENLDN
MAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRILRIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGD
TARLRSTIQELSDEKKRQQILDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE
LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMISDYLSAKNPVFVNRFNTLLR
DFKNSLKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38833; Mature: 38833

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVIS
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TLDEADIGEFKLKVQENLDNMAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRIL
HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHHHHHH
RIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGDTARLRSTIQELSDEKKRQQI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEE
SDYLSAKNPVFVNRFNTLLRDFKNSLKN
HHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVIS
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TLDEADIGEFKLKVQENLDNMAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRIL
HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHHHHHH
RIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGDTARLRSTIQELSDEKKRQQI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEE
SDYLSAKNPVFVNRFNTLLRDFKNSLKN
HHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA