Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266122

Identifier: 32266122

GI number: 32266122

Start: 601070

End: 602374

Strand: Direct

Name: 32266122

Synonym: HH0623

Alternate gene names: NA

Gene position: 601070-602374 (Clockwise)

Preceding gene: 32266121

Following gene: 32266123

Centisome position: 33.41

GC content: 35.86

Gene sequence:

>1305_bases
ATGAAGTATCTGTGCGCTTTTCTGCTCTGCATAAGCGTAATGTGGGGAGATTCTGAATTTGTAGATTTCAATAAACTAGA
AGAAGAATTTCATATTCATATACCCCAAAATAAGCAAGAGATGGATATTGATGAATTTATTGAGCGTGTGGAAAAAAACT
CAATTAATCTTGCAAAATCTCGTGCAATGGCACGAAGTCTTTTTTATGAAGGCAAGGCGATGCGTGCGTGGAATGCTGGA
TATATTGATGCACAGGTTAATAGAGCAAAATCTCCTGCTGGTGGAACGGAACTTGAAAATACCATTTTGCTTATGCTCAC
TCCTCGTTTGCCGTGGGTTACTTATACGCTTGCTCAAAGCTATCAAAACAAAATTTTAAGGCAAGAAAAATCCTACGAGC
TTACAAAACGTCTTGCTCTTATTGCAGCAAAAAGGCTTTATTTGGATTATCTCGTGCTTAAAGAACAGCACCAAATCTAT
ACAAACCGCTATGAAAATGCCAAAAACCAACTTCGAATGTCACAAGTGCAATATGAAGCAGGACGTATCAGCAAATCTCA
ATATCTTTTTTTTAAAAGCGATTTTTTAGCAACCAAAGTTGCACTCAAAACTTCTCATACAGAAATGCTTAATACTCTCA
ATGCACTCAAAGTAATTTTGGGCATTACAACTGAAAATAGTGATATAGACATAAATGGGTTGGTATTTAAATATTTGCAT
TTTGATAGGGCAAATCTTGAAAAAACACTCTCTAAAAATCTGTATCTTGAAATCGTATCACTTGATATTAAAGATTACCA
ATATAGCGCGAATATTGCTTCACAAAGCCGATTTGATAATATTGAAATTGGCGGAGGTATTAAAAAAGCAGAATCAAGTG
ATGGAGTAACCTTTCAGCTTAAGATTCCTATCCCTTTGACAACCAAATATGATAATCAAAAAGCGATGTATCTCGCACTC
CAAAGTGGCTCTATTCGTGAGAATGAGATTCTTAAAGATTCTTTACTTGTAAATGCCAAATCCTATCTTGAGCAGCTCGC
ATACAAAAAAGAGGTTATTGCTCTTGCAAAAGATAATGAAAATAATCGCGCACAATTAAGTGAAATTGCGCGAATTGGTT
ATGAAGCAGGAAAGACAAGTGCATTTGAATATTTAAGCGTAAAAAATGAACATCTTAACGCAATGATTGCTACCACTCAA
GCAAAACGCGATTATGTCCAAACACTCTCTATGCTTGAGGAAACTCTCAGCTCTGTGCTCAACCTCAATACTTTGAAAAA
ACCACTTATGGAGGAACAATCGTGA

Upstream 100 bases:

>100_bases
GAGATTTTAAAAATAGCCTAAAAAATTAAAATATAAATCATAAAAAAATGAAAAATACACTATAATAAACCCTCACAAAA
TCAAACAAGGATTGTAAATA

Downstream 100 bases:

>100_bases
AAAAATATTTATATTTATTATGCCTCATAATAAGCTTTTCTTTGTGTTATGAAGAAATATCTATCTCTCAAGAAGAACTT
GCAAAAAATGGTATAAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Cadmium-Zinc-Nickel Outer Membrane Efflux Protein CznC

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKYLCAFLLCISVMWGDSEFVDFNKLEEEFHIHIPQNKQEMDIDEFIERVEKNSINLAKSRAMARSLFYEGKAMRAWNAG
YIDAQVNRAKSPAGGTELENTILLMLTPRLPWVTYTLAQSYQNKILRQEKSYELTKRLALIAAKRLYLDYLVLKEQHQIY
TNRYENAKNQLRMSQVQYEAGRISKSQYLFFKSDFLATKVALKTSHTEMLNTLNALKVILGITTENSDIDINGLVFKYLH
FDRANLEKTLSKNLYLEIVSLDIKDYQYSANIASQSRFDNIEIGGGIKKAESSDGVTFQLKIPIPLTTKYDNQKAMYLAL
QSGSIRENEILKDSLLVNAKSYLEQLAYKKEVIALAKDNENNRAQLSEIARIGYEAGKTSAFEYLSVKNEHLNAMIATTQ
AKRDYVQTLSMLEETLSSVLNLNTLKKPLMEEQS

Sequences:

>Translated_434_residues
MKYLCAFLLCISVMWGDSEFVDFNKLEEEFHIHIPQNKQEMDIDEFIERVEKNSINLAKSRAMARSLFYEGKAMRAWNAG
YIDAQVNRAKSPAGGTELENTILLMLTPRLPWVTYTLAQSYQNKILRQEKSYELTKRLALIAAKRLYLDYLVLKEQHQIY
TNRYENAKNQLRMSQVQYEAGRISKSQYLFFKSDFLATKVALKTSHTEMLNTLNALKVILGITTENSDIDINGLVFKYLH
FDRANLEKTLSKNLYLEIVSLDIKDYQYSANIASQSRFDNIEIGGGIKKAESSDGVTFQLKIPIPLTTKYDNQKAMYLAL
QSGSIRENEILKDSLLVNAKSYLEQLAYKKEVIALAKDNENNRAQLSEIARIGYEAGKTSAFEYLSVKNEHLNAMIATTQ
AKRDYVQTLSMLEETLSSVLNLNTLKKPLMEEQS
>Mature_434_residues
MKYLCAFLLCISVMWGDSEFVDFNKLEEEFHIHIPQNKQEMDIDEFIERVEKNSINLAKSRAMARSLFYEGKAMRAWNAG
YIDAQVNRAKSPAGGTELENTILLMLTPRLPWVTYTLAQSYQNKILRQEKSYELTKRLALIAAKRLYLDYLVLKEQHQIY
TNRYENAKNQLRMSQVQYEAGRISKSQYLFFKSDFLATKVALKTSHTEMLNTLNALKVILGITTENSDIDINGLVFKYLH
FDRANLEKTLSKNLYLEIVSLDIKDYQYSANIASQSRFDNIEIGGGIKKAESSDGVTFQLKIPIPLTTKYDNQKAMYLAL
QSGSIRENEILKDSLLVNAKSYLEQLAYKKEVIALAKDNENNRAQLSEIARIGYEAGKTSAFEYLSVKNEHLNAMIATTQ
AKRDYVQTLSMLEETLSSVLNLNTLKKPLMEEQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49777; Mature: 49777

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLCAFLLCISVMWGDSEFVDFNKLEEEFHIHIPQNKQEMDIDEFIERVEKNSINLAKS
CHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHH
RAMARSLFYEGKAMRAWNAGYIDAQVNRAKSPAGGTELENTILLMLTPRLPWVTYTLAQS
HHHHHHHHHCCCEEEECCCCEEEEEHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
YQNKILRQEKSYELTKRLALIAAKRLYLDYLVLKEQHQIYTNRYENAKNQLRMSQVQYEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRISKSQYLFFKSDFLATKVALKTSHTEMLNTLNALKVILGITTENSDIDINGLVFKYLH
CCCCCCEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCCCCCCHHEEEEEHH
FDRANLEKTLSKNLYLEIVSLDIKDYQYSANIASQSRFDNIEIGGGIKKAESSDGVTFQL
CCHHHHHHHHCCCEEEEEEEEEEECEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEEEE
KIPIPLTTKYDNQKAMYLALQSGSIRENEILKDSLLVNAKSYLEQLAYKKEVIALAKDNE
EECCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
NNRAQLSEIARIGYEAGKTSAFEYLSVKNEHLNAMIATTQAKRDYVQTLSMLEETLSSVL
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
NLNTLKKPLMEEQS
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKYLCAFLLCISVMWGDSEFVDFNKLEEEFHIHIPQNKQEMDIDEFIERVEKNSINLAKS
CHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHH
RAMARSLFYEGKAMRAWNAGYIDAQVNRAKSPAGGTELENTILLMLTPRLPWVTYTLAQS
HHHHHHHHHCCCEEEECCCCEEEEEHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
YQNKILRQEKSYELTKRLALIAAKRLYLDYLVLKEQHQIYTNRYENAKNQLRMSQVQYEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRISKSQYLFFKSDFLATKVALKTSHTEMLNTLNALKVILGITTENSDIDINGLVFKYLH
CCCCCCEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCCCCCCHHEEEEEHH
FDRANLEKTLSKNLYLEIVSLDIKDYQYSANIASQSRFDNIEIGGGIKKAESSDGVTFQL
CCHHHHHHHHCCCEEEEEEEEEEECEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEEEE
KIPIPLTTKYDNQKAMYLALQSGSIRENEILKDSLLVNAKSYLEQLAYKKEVIALAKDNE
EECCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
NNRAQLSEIARIGYEAGKTSAFEYLSVKNEHLNAMIATTQAKRDYVQTLSMLEETLSSVL
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
NLNTLKKPLMEEQS
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA