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The map label for this gene is atpH

Identifier: 32265925

GI number: 32265925

Start: 409884

End: 410408

Strand: Direct

Name: atpH

Synonym: HH0426

Alternate gene names: 32265925

Gene position: 409884-410408 (Clockwise)

Preceding gene: 32265924

Following gene: 32265926

Centisome position: 22.78

GC content: 33.33

Gene sequence:

>525_bases
ATGTTCAATATCATCTCAAAAAAATATACTCAAGCCCTTGTAGATTCAGGTAGCAATTTAGATGAAACTCTAAGTATATT
AAAAGGATTATCGCTTGCACTTAAAGATAAAAGAAATGCCGATATCATTGCTTCACCTTTCTTAAGTAAGACACAAAAAG
AGCAATTTTTATTAGAATCTGTTGGCAAAGTGGATATGAAACTGCAAAATTTTTTCCGCCTTTTAGCACAATCCGATAGA
ATATTACTTATTCCATATATCAGCGATGAACTTGAAAGACGTTTGCTTGCGCGCAAAAAAGAATATGCTGCTACACTTAC
TGCTAAAGAAAGTTTAGACACTAAAACATTAGAGAAAATTCAAGATTCTCTAGCTAAAAAGCTTGGTGTCAAACTTAGCA
TTAAGCAAAGGTTGAGTGAGGTAGATGGTATTAAGTTGAGCGTTGAGGATTTAGGTATTGAGGTGTCTTTTTCCAAAGAG
CGCTTTAGTAATGATTTAAAGCATCATATCCTCAAAGCACTTTAA

Upstream 100 bases:

>100_bases
ACGAAGCCGTTGATGAGCTATTAAATAAATTGATACAAAGTGATGATGTCCAGCTTAACAAAGAAGATTATGTTAATATC
ATTACAAAAAGGATTTCATA

Downstream 100 bases:

>100_bases
TTTTAACATAAGGAGAGAAAAGTGACAACAAAAATCAAATCAGAAGAAATTAGCTCAATTATCAAAGAGAGAATTGAGAA
CTTTAATATCAACATTGACA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MFNIISKKYTQALVDSGSNLDETLSILKGLSLALKDKRNADIIASPFLSKTQKEQFLLESVGKVDMKLQNFFRLLAQSDR
ILLIPYISDELERRLLARKKEYAATLTAKESLDTKTLEKIQDSLAKKLGVKLSIKQRLSEVDGIKLSVEDLGIEVSFSKE
RFSNDLKHHILKAL

Sequences:

>Translated_174_residues
MFNIISKKYTQALVDSGSNLDETLSILKGLSLALKDKRNADIIASPFLSKTQKEQFLLESVGKVDMKLQNFFRLLAQSDR
ILLIPYISDELERRLLARKKEYAATLTAKESLDTKTLEKIQDSLAKKLGVKLSIKQRLSEVDGIKLSVEDLGIEVSFSKE
RFSNDLKHHILKAL
>Mature_174_residues
MFNIISKKYTQALVDSGSNLDETLSILKGLSLALKDKRNADIIASPFLSKTQKEQFLLESVGKVDMKLQNFFRLLAQSDR
ILLIPYISDELERRLLARKKEYAATLTAKESLDTKTLEKIQDSLAKKLGVKLSIKQRLSEVDGIKLSVEDLGIEVSFSKE
RFSNDLKHHILKAL

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_HELHP (Q7VJ24)

Other databases:

- EMBL:   AE017125
- RefSeq:   NP_859957.1
- ProteinModelPortal:   Q7VJ24
- GeneID:   1493480
- GenomeReviews:   AE017125_GR
- KEGG:   hhe:HH0426
- NMPDR:   fig|235279.1.peg.426
- HOGENOM:   HBG320888
- OMA:   QMSEYIL
- ProtClustDB:   PRK08474
- BioCyc:   HHEP235279:HH_0426-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19695; Mature: 19695

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNIISKKYTQALVDSGSNLDETLSILKGLSLALKDKRNADIIASPFLSKTQKEQFLLES
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHH
VGKVDMKLQNFFRLLAQSDRILLIPYISDELERRLLARKKEYAATLTAKESLDTKTLEKI
HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QDSLAKKLGVKLSIKQRLSEVDGIKLSVEDLGIEVSFSKERFSNDLKHHILKAL
HHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCEEEEECHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFNIISKKYTQALVDSGSNLDETLSILKGLSLALKDKRNADIIASPFLSKTQKEQFLLES
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHH
VGKVDMKLQNFFRLLAQSDRILLIPYISDELERRLLARKKEYAATLTAKESLDTKTLEKI
HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QDSLAKKLGVKLSIKQRLSEVDGIKLSVEDLGIEVSFSKERFSNDLKHHILKAL
HHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCEEEEECHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12810954