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The map label for this gene is atpF'

Identifier: 32265924

GI number: 32265924

Start: 409369

End: 409884

Strand: Direct

Name: atpF'

Synonym: HH0425

Alternate gene names: 32265924

Gene position: 409369-409884 (Clockwise)

Preceding gene: 32265923

Following gene: 32265925

Centisome position: 22.75

GC content: 29.84

Gene sequence:

>516_bases
ATGAAAAAAATAGCTTTTTTTGTAATATGTGTGGGCTTTCCTTCTTTAATTTTTGCATCAGCAAGTATTCAAGAAAGTGA
TTTTATTCAACGTGTCATCAATTTTGTCATATTTGTTGCAATTTTGTGGTATTTTGCATTTGATTCTATCAAGGGTATTT
TTGTTAATAGAAGAAATGCTATTTCAGCTCGTTTGCAAGAAGTGCAAGAAAATCTTCATAAAGCAAAACGAGAAAAAGAA
ACTGCCCAAAAACGTTTAGAGGAGAGCAAAGAGAAAGCAAAAAATATTGTTAATGCTGCAAAGCAAGAAGCATATTTATT
AGAACAAAAATACAATGACCAAATTAAAAAGGATATAGAAACTCTCAAATACGCACTCGAATCAAACATTGAATTTGAAC
GCAGAAAAATTACTCACGAAGCCGTTGATGAGCTATTAAATAAATTGATACAAAGTGATGATGTCCAGCTTAACAAAGAA
GATTATGTTAATATCATTACAAAAAGGATTTCATAA

Upstream 100 bases:

>100_bases
ACAAGAACAAAAATCTCAGCTTTACACAGAGCTTCTTGAGCAGCTTCCTTTATTTAAAACAATACTCAATACAAAACTTA
AACAAATTTAGGAGGGGATA

Downstream 100 bases:

>100_bases
TGTTCAATATCATCTCAAAAAAATATACTCAAGCCCTTGTAGATTCAGGTAGCAATTTAGATGAAACTCTAAGTATATTA
AAAGGATTATCGCTTGCACT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKKIAFFVICVGFPSLIFASASIQESDFIQRVINFVIFVAILWYFAFDSIKGIFVNRRNAISARLQEVQENLHKAKREKE
TAQKRLEESKEKAKNIVNAAKQEAYLLEQKYNDQIKKDIETLKYALESNIEFERRKITHEAVDELLNKLIQSDDVQLNKE
DYVNIITKRIS

Sequences:

>Translated_171_residues
MKKIAFFVICVGFPSLIFASASIQESDFIQRVINFVIFVAILWYFAFDSIKGIFVNRRNAISARLQEVQENLHKAKREKE
TAQKRLEESKEKAKNIVNAAKQEAYLLEQKYNDQIKKDIETLKYALESNIEFERRKITHEAVDELLNKLIQSDDVQLNKE
DYVNIITKRIS
>Mature_171_residues
MKKIAFFVICVGFPSLIFASASIQESDFIQRVINFVIFVAILWYFAFDSIKGIFVNRRNAISARLQEVQENLHKAKREKE
TAQKRLEESKEKAKNIVNAAKQEAYLLEQKYNDQIKKDIETLKYALESNIEFERRKITHEAVDELLNKLIQSDDVQLNKE
DYVNIITKRIS

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_HELHP (Q7VJ25)

Other databases:

- EMBL:   AE017125
- RefSeq:   NP_859956.1
- GeneID:   1493479
- GenomeReviews:   AE017125_GR
- KEGG:   hhe:HH0425
- NMPDR:   fig|235279.1.peg.425
- HOGENOM:   HBG578849
- OMA:   LMDLEVK
- ProtClustDB:   PRK08475
- BioCyc:   HHEP235279:HH_0425-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 20018; Mature: 20018

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd324a78)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAFFVICVGFPSLIFASASIQESDFIQRVINFVIFVAILWYFAFDSIKGIFVNRRNA
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ISARLQEVQENLHKAKREKETAQKRLEESKEKAKNIVNAAKQEAYLLEQKYNDQIKKDIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLKYALESNIEFERRKITHEAVDELLNKLIQSDDVQLNKEDYVNIITKRIS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCH
>Mature Secondary Structure
MKKIAFFVICVGFPSLIFASASIQESDFIQRVINFVIFVAILWYFAFDSIKGIFVNRRNA
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ISARLQEVQENLHKAKREKETAQKRLEESKEKAKNIVNAAKQEAYLLEQKYNDQIKKDIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLKYALESNIEFERRKITHEAVDELLNKLIQSDDVQLNKEDYVNIITKRIS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12810954