| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is mtfA [H]
Identifier: 30063433
GI number: 30063433
Start: 2041906
End: 2042742
Strand: Direct
Name: mtfA [H]
Synonym: S2148
Alternate gene names: 30063433
Gene position: 2041906-2042742 (Clockwise)
Preceding gene: 30063432
Following gene: 30063434
Centisome position: 44.4
GC content: 45.16
Gene sequence:
>837_bases GTGCAATTTTGTTCAAGTGACGAGTTTGCGAGCAAAACGATGATTAAGTGGCCCTGGAAAGTACAAGAATCAGCACATCA AACTGCCCTTCCCTGGCAGGAAGCACTATCGATCCCCCTTTTAACGTGTCTGACAGAACAGGAACAAAGCAAATTGGTCG CTCTTGCCGAACGTTTTTTACAGCAAAAACGGCTTGTTCCTTTACAGGGCTTTGAGCTGAATTCATTAAGAAGCTGCCGG ATAGCACTTCTATTTTGCCTGCCCGTTCTGGAGTTAGGACTGGAATGGCTGGATGGTTTTCATGAAGTCTTAATTTATCC TGCGCCATTTGTGGTCGATGATGAATGGGAAGACGATATCGGTCTGGTGCATAACCAACGTATTGTTCAGTCAGGTCAGA GCTGGCAGCAAGGGCCTATCGTTTTGAACTGGTTGGATATACAAGATTCTTTTGATGCTTCTGGTTTTAACCTGATTATT CATGAAGTCGCTCATAAGCTGGACACCCGTAACGGCGATCGCGCCAGCGGAGTTCCCTTTATTTCGTTGCGTGAGGTTGC TGGCTGGGAACACGATCTTCATGCTGCAATGAACAACATTCAGGAAGAAATCGAATTAGTTGGTGAGAATGCGGCGAGCA TTGATGCTTATGCTGCCAGTGATCCTGCTGAATGTTTTGCCGTACTTTCTGAATATTTCTTTAGCGCCCCAGAACTTTTT GCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGTCAATTTTATCAACAAGATCCTTTGCAGAGACTGCATCACGCTAA TGATACAGACTCGTTTTCAGCGACGAATGTTCATTAA
Upstream 100 bases:
>100_bases CTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTTGCCATGATGCCAGGAAATTTGG CATTTTAACAGTCCCTGTCC
Downstream 100 bases:
>100_bases TTAACAACTTTGAAGATTAATTAACCAATTGAAATGGCTTATGAAATTTAGTGTTGACAGACAAGGTACCGCTAAGTAAT ATGCGCCCCGTTCTCACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Mlc titration factor A [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MQFCSSDEFASKTMIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVALAERFLQQKRLVPLQGFELNSLRSCR IALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLII HEVAHKLDTRNGDRASGVPFISLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELF APRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH
Sequences:
>Translated_278_residues MQFCSSDEFASKTMIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVALAERFLQQKRLVPLQGFELNSLRSCR IALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLII HEVAHKLDTRNGDRASGVPFISLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELF APRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH >Mature_278_residues MQFCSSDEFASKTMIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVALAERFLQQKRLVPLQGFELNSLRSCR IALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLII HEVAHKLDTRNGDRASGVPFISLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELF APRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH
Specific function: Involved in the regulation of ptsG expression by binding and inactivating mlc [H]
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=265, Percent_Identity=98.8679245283019, Blast_Score=539, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 31701; Mature: 31701
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFCSSDEFASKTMIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVALAERFL CCCCCCCCHHCCCEEECCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH QQKRLVPLQGFELNSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDI HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH GLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPF HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCE ISLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELF EEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH APRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH CCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQFCSSDEFASKTMIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVALAERFL CCCCCCCCHHCCCEEECCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH QQKRLVPLQGFELNSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDI HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH GLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPF HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCE ISLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELF EEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH APRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH CCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA