Click here to switch to the map view.

The map label for this gene is ykfJ [H]

Identifier: 30061852

GI number: 30061852

Start: 303364

End: 304407

Strand: Direct

Name: ykfJ [H]

Synonym: S0304

Alternate gene names: 30061852

Gene position: 303364-304407 (Clockwise)

Preceding gene: 30061851

Following gene: 30061853

Centisome position: 6.6

GC content: 52.87

Gene sequence:

>1044_bases
ATGGGCAATTATATTCGTCCCTTATCCGATGCGGTATTTACCATCGCATCTGATGACCTGTGGATCGAGAGTTTAGCGAT
CCAACAATTACACACCACGGCAAATTTACCCAACATGCAGCGCGTAGTGGGGATGCCAGATTTACACCCCGGACGCGGCT
ACCCGATTGGCGCAGCGTTCTTCTCCGCAGGCCGTTTTTACCCAGCACTGGTCGGCAATGATATCGGCTGTGGCATGGCG
CTATGGCAAACAGATATTCTCGCTCGCAAATACAACGCCGATAAGTTTGAAAAGCGATTATCAGCTTTGGATGACGTTGC
TGAAGAAAGCTGGCTGGAGGAAAACCTGCCGTCAGCATTTGCACAGCATCCGTGGCGCAGCTCGCTTGGCTCTATCGGTG
GTGGCAATCATTTCGCTGAACTGCAACAAGTTGATCAAATCATCAACGCTGAACTGTTTGCACTGGCAGGTCTGGATGCG
CAGCATCTGCAACTGCTGGTTCATAGCGGCTCGAGGGGGCTAGGGCAGTCTATTTTACAGCGGCATATTGCCTCGTTTTC
GCATCATGGTTTGCCTGAAGGCAGTGACGACGCGCTGGCGTTTGCGCGTTTTAATCGCCACCTGATCGCTTTGCGCATAA
TGCAACAGGTTAAGGCCACCGGAAGTCCGGTTCTGGATGTGGCGCATAACTTTGTTAGCGCGTGTCGAATCGGTGATCAA
CAAGGGGTCTTACATCGTAAAGGTGCCACGCCTGATGACTGTGGTCTGGTGGTTATTCCCGGTTCACGCGGTGATTACTC
CAGGCTGGTTCAGCCCGTCAGGAGTGAGGAAACATTGCATTCGCTGGCGCATGGGGCTGGGCGTAAATGGGGGCGCACCG
AGTGTAAAGGGCGTCTGGCAGCGAAATACACAGCGACGCAACTCTCGCGTACTGAACTTGGCAGTCGGGTAATTTGTCGC
GATAAACAACTCATCTTCGAAGAAGCGCCACAAGCCTATAAATCGGCTGAAAGTGTGGTGCAATGTCAGGGCAGGCCGGA
TTAA

Upstream 100 bases:

>100_bases
ATTCGTCTGCCATTTCCTGATTTTTTAATTGTTACTCTCAATAATTCAAGTCGCAGCACATGCAACTTGAAGTATGACGA
GTCTATTTACGGAATGGTAT

Downstream 100 bases:

>100_bases
TTATTCCTGTCGCGCGGCTGCGTCCGGTGCTAACGCTCAAAAACAGTGGAGGGAAAAAAGGATGATCTTGCTATAACTCT
CCTCAGCGCAGGGGCCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSAGRFYPALVGNDIGCGMA
LWQTDILARKYNADKFEKRLSALDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDA
QHLQLLVHSGSRGLGQSILQRHIASFSHHGLPEGSDDALAFARFNRHLIALRIMQQVKATGSPVLDVAHNFVSACRIGDQ
QGVLHRKGATPDDCGLVVIPGSRGDYSRLVQPVRSEETLHSLAHGAGRKWGRTECKGRLAAKYTATQLSRTELGSRVICR
DKQLIFEEAPQAYKSAESVVQCQGRPD

Sequences:

>Translated_347_residues
MGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSAGRFYPALVGNDIGCGMA
LWQTDILARKYNADKFEKRLSALDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDA
QHLQLLVHSGSRGLGQSILQRHIASFSHHGLPEGSDDALAFARFNRHLIALRIMQQVKATGSPVLDVAHNFVSACRIGDQ
QGVLHRKGATPDDCGLVVIPGSRGDYSRLVQPVRSEETLHSLAHGAGRKWGRTECKGRLAAKYTATQLSRTELGSRVICR
DKQLIFEEAPQAYKSAESVVQCQGRPD
>Mature_346_residues
GNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSAGRFYPALVGNDIGCGMAL
WQTDILARKYNADKFEKRLSALDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDAQ
HLQLLVHSGSRGLGQSILQRHIASFSHHGLPEGSDDALAFARFNRHLIALRIMQQVKATGSPVLDVAHNFVSACRIGDQQ
GVLHRKGATPDDCGLVVIPGSRGDYSRLVQPVRSEETLHSLAHGAGRKWGRTECKGRLAAKYTATQLSRTELGSRVICRD
KQLIFEEAPQAYKSAESVVQCQGRPD

Specific function: Unknown

COG id: COG1690

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367224, Length=392, Percent_Identity=27.0408163265306, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001233 [H]

Pfam domain/function: PF01139 UPF0027 [H]

EC number: NA

Molecular weight: Translated: 37953; Mature: 37822

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAF
CCCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHH
FSAGRFYPALVGNDIGCGMALWQTDILARKYNADKFEKRLSALDDVAEESWLEENLPSAF
HHCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHH
AQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDAQHLQLLVHSGSRGLGQSILQ
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH
RHIASFSHHGLPEGSDDALAFARFNRHLIALRIMQQVKATGSPVLDVAHNFVSACRIGDQ
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
QGVLHRKGATPDDCGLVVIPGSRGDYSRLVQPVRSEETLHSLAHGAGRKWGRTECKGRLA
CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHH
AKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCQGRPD
HHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAF
CCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHH
FSAGRFYPALVGNDIGCGMALWQTDILARKYNADKFEKRLSALDDVAEESWLEENLPSAF
HHCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHH
AQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDAQHLQLLVHSGSRGLGQSILQ
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH
RHIASFSHHGLPEGSDDALAFARFNRHLIALRIMQQVKATGSPVLDVAHNFVSACRIGDQ
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
QGVLHRKGATPDDCGLVVIPGSRGDYSRLVQPVRSEETLHSLAHGAGRKWGRTECKGRLA
CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHH
AKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCQGRPD
HHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]