Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yafP

Identifier: 30061851

GI number: 30061851

Start: 302666

End: 303118

Strand: Direct

Name: yafP

Synonym: S0303

Alternate gene names: 30061851

Gene position: 302666-303118 (Clockwise)

Preceding gene: 30061850

Following gene: 30061852

Centisome position: 6.58

GC content: 42.83

Gene sequence:

>453_bases
ATGAATAACATACAAATAAGAGATTATCAGCCTGGCGATTTTCAGCAACTATGCGCTATTTTCATTAGAGCGGTTACGAT
GACCGTCAGTCAGCATTATTCACTACAACAAATTGCCGCCTGGGCGCAGATTGACGAATCTCGCTGGAAGGAGAAACTCG
CGAAATCACAAGTGCGGGTTGCAGTTATTAATGCAAAACTGGTCGGCTTTATTACCTGCGTTGAACACTATATCGATATG
TTATTTGTTGACCCTGAATACACCCGCCGTGGGGTTGCCAGCGCTTTGTTAAAACCTTTTATTAAGTCTGAATCCGAACT
TACGGTGGACGCAAGCATAACCGCAAAACCCTTTTTTGAACGTTATGGTTTTCAGACAGTTAAGCAGCAGCGCGTTGAAT
GCCGGGGAGCGTGGTTTATTAATTTTTATATGCGTTATAAACCGCAACATTAA

Upstream 100 bases:

>100_bases
TCTGAAGCCTGAACCTCATAAACTGGCTCGAGATAACAACCAAATGCATAAAATTGGAAAAATGGCAGAAGCGTTTCGCA
TGCGTTTTTGAATTTATATT

Downstream 100 bases:

>100_bases
ATCCAGCTTGCAATGAAAATAACGCCCGCCTAGTATGTGCGCGTTTTCTTATTCCACAAACTGCAAGGAGGTAAATCATG
ACAAATCCTTTATCAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNNIQIRDYQPGDFQQLCAIFIRAVTMTVSQHYSLQQIAAWAQIDESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDM
LFVDPEYTRRGVASALLKPFIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFINFYMRYKPQH

Sequences:

>Translated_150_residues
MNNIQIRDYQPGDFQQLCAIFIRAVTMTVSQHYSLQQIAAWAQIDESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDM
LFVDPEYTRRGVASALLKPFIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFINFYMRYKPQH
>Mature_150_residues
MNNIQIRDYQPGDFQQLCAIFIRAVTMTVSQHYSLQQIAAWAQIDESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDM
LFVDPEYTRRGVASALLKPFIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFINFYMRYKPQH

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1786428, Length=150, Percent_Identity=91.3333333333333, Blast_Score=289, Evalue=5e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.-

Molecular weight: Translated: 17549; Mature: 17549

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIQIRDYQPGDFQQLCAIFIRAVTMTVSQHYSLQQIAAWAQIDESRWKEKLAKSQVRV
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
AVINAKLVGFITCVEHYIDMLFVDPEYTRRGVASALLKPFIKSESELTVDASITAKPFFE
EEEHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
RYGFQTVKQQRVECRGAWFINFYMRYKPQH
HHCHHHHHHHHHHHHHHHEEEEEEEECCCC
>Mature Secondary Structure
MNNIQIRDYQPGDFQQLCAIFIRAVTMTVSQHYSLQQIAAWAQIDESRWKEKLAKSQVRV
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
AVINAKLVGFITCVEHYIDMLFVDPEYTRRGVASALLKPFIKSESELTVDASITAKPFFE
EEEHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
RYGFQTVKQQRVECRGAWFINFYMRYKPQH
HHCHHHHHHHHHHHHHHHEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]