| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is glcK [H]
Identifier: 29350062
GI number: 29350062
Start: 6089786
End: 6090739
Strand: Reverse
Name: glcK [H]
Synonym: BT_4654
Alternate gene names: 29350062
Gene position: 6090739-6089786 (Counterclockwise)
Preceding gene: 29350063
Following gene: 29350061
Centisome position: 97.29
GC content: 47.8
Gene sequence:
>954_bases ATGGAAAAAGAATACGCTATAGGAATTGATCTTGGCGGGACTTCTGTGAAATACGCTCTTATTGATAATAATGGCGTATT TCACTTTCAAGGGAAGCTACCGTCGAATGCCGACGTATCAGCCGAAGCTGTCATCGGGCAATTAGTCAAGGCAGTCAATG AAGTGAAAACCTTTGCCGAAGCAAAGAGGTATACAATAGCCGGTATCGGGATAGGGACGCCGGGAATTGTCGATTGTACG AATCGTATCGTATTGGGAGGTGCGGAGAATATTCAAGGCTGGGAAAATCTGAAACTGGCAGACCGGATGGAAAAAGAGAC CGGACTTCCTACCCAACTGGGAAATGACGCTAATCTGATGGGACTTGGCGAAACGATGTACGGAGCCGGAAACGGAGCCA CTCATGTGGTCTTTCTGACTGTAGGAACCGGTATCGGTGGCGCAGTCATAATTGACGGCAAACTGTTTAACGGATACGCC AATAGAGGTACTGAATTGGGACATGTCCCCTTGATAGCTAATGGTGAACCTTGCGCCTGCGGTTCAATAGGATGCCTTGA ACATTATGCTTCCACTGCCGCACTGGTCCGTCGTTTCAGCAAACGGATAGCCGAAGCCGGCATCTCTTATCCGAATGAAG AAATAAACGGAGAATTGATCGTCCGTCTCTATAAACAAGGAGATAAGATTGCGGCTGAGTCGCTGAACGAACATTGTGAT TTCCTCGGTCACGGCATTGCCGGATTTATTAATATCTTCAGCCCTCAAAGAGTCGTTATCGGCGGAGGACTGTCCGAAGC CGGAGACTTTTATATTCAGAAAGTAAGTGAGAAAGCCCTTCGCTATGCCATCCCCGACTGTGCCGTGAACACGGAAATCA TGGCAGCCTCTTTAGGCAACAAAGCCGGAAGTATCGGTGCCGCCTCCCTCTTTTTAAATAGAAAACCGAATTAA
Upstream 100 bases:
>100_bases AAGCTGTTGGCACTGCTATGCCAAGCCTTTGGCACAAGCGTGCCAATACGGTGGCACAAGCATGGCACAGTATAAACGAA TTTAAAACATACCTAGTTAT
Downstream 100 bases:
>100_bases ATGAAGAGCAGAAAACCTTCTCAACTTATTTAAGATTATGAAGAAAAATCTAGGAATGCTGGCGCTGATTATGGCGTTCT GGTTCACTATCTCGTTTATT
Product: ROK family transcriptional repressor
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MEKEYAIGIDLGGTSVKYALIDNNGVFHFQGKLPSNADVSAEAVIGQLVKAVNEVKTFAEAKRYTIAGIGIGTPGIVDCT NRIVLGGAENIQGWENLKLADRMEKETGLPTQLGNDANLMGLGETMYGAGNGATHVVFLTVGTGIGGAVIIDGKLFNGYA NRGTELGHVPLIANGEPCACGSIGCLEHYASTAALVRRFSKRIAEAGISYPNEEINGELIVRLYKQGDKIAAESLNEHCD FLGHGIAGFINIFSPQRVVIGGGLSEAGDFYIQKVSEKALRYAIPDCAVNTEIMAASLGNKAGSIGAASLFLNRKPN
Sequences:
>Translated_317_residues MEKEYAIGIDLGGTSVKYALIDNNGVFHFQGKLPSNADVSAEAVIGQLVKAVNEVKTFAEAKRYTIAGIGIGTPGIVDCT NRIVLGGAENIQGWENLKLADRMEKETGLPTQLGNDANLMGLGETMYGAGNGATHVVFLTVGTGIGGAVIIDGKLFNGYA NRGTELGHVPLIANGEPCACGSIGCLEHYASTAALVRRFSKRIAEAGISYPNEEINGELIVRLYKQGDKIAAESLNEHCD FLGHGIAGFINIFSPQRVVIGGGLSEAGDFYIQKVSEKALRYAIPDCAVNTEIMAASLGNKAGSIGAASLFLNRKPN >Mature_317_residues MEKEYAIGIDLGGTSVKYALIDNNGVFHFQGKLPSNADVSAEAVIGQLVKAVNEVKTFAEAKRYTIAGIGIGTPGIVDCT NRIVLGGAENIQGWENLKLADRMEKETGLPTQLGNDANLMGLGETMYGAGNGATHVVFLTVGTGIGGAVIIDGKLFNGYA NRGTELGHVPLIANGEPCACGSIGCLEHYASTAALVRRFSKRIAEAGISYPNEEINGELIVRLYKQGDKIAAESLNEHCD FLGHGIAGFINIFSPQRVVIGGGLSEAGDFYIQKVSEKALRYAIPDCAVNTEIMAASLGNKAGSIGAASLFLNRKPN
Specific function: May Be A Regulator In Specific Sugar Metabolism. May Influence The Rate Of Glucose Uptake Or Glycolysis In Cells In The Rich Medium. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=285, Percent_Identity=31.5789473684211, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI298566325, Length=285, Percent_Identity=31.5789473684211, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4885285, Length=285, Percent_Identity=31.5789473684211, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI190014632, Length=285, Percent_Identity=31.5789473684211, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI1787878, Length=269, Percent_Identity=24.907063197026, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI87081733, Length=320, Percent_Identity=27.1875, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1787363, Length=317, Percent_Identity=26.813880126183, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786891, Length=302, Percent_Identity=27.1523178807947, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1790522, Length=325, Percent_Identity=26.7692307692308, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082230, Length=262, Percent_Identity=30.5343511450382, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 33321; Mature: 33321
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEYAIGIDLGGTSVKYALIDNNGVFHFQGKLPSNADVSAEAVIGQLVKAVNEVKTFAE CCCCEEEEEEECCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AKRYTIAGIGIGTPGIVDCTNRIVLGGAENIQGWENLKLADRMEKETGLPTQLGNDANLM HCCEEEEEECCCCCCCEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEE GLGETMYGAGNGATHVVFLTVGTGIGGAVIIDGKLFNGYANRGTELGHVPLIANGEPCAC ECCHHHCCCCCCCEEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCEEEEECCCCCCC GSIGCLEHYASTAALVRRFSKRIAEAGISYPNEEINGELIVRLYKQGDKIAAESLNEHCD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH FLGHGIAGFINIFSPQRVVIGGGLSEAGDFYIQKVSEKALRYAIPDCAVNTEIMAASLGN HHHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCC KAGSIGAASLFLNRKPN CCCCCEEEEEEEECCCC >Mature Secondary Structure MEKEYAIGIDLGGTSVKYALIDNNGVFHFQGKLPSNADVSAEAVIGQLVKAVNEVKTFAE CCCCEEEEEEECCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AKRYTIAGIGIGTPGIVDCTNRIVLGGAENIQGWENLKLADRMEKETGLPTQLGNDANLM HCCEEEEEECCCCCCCEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEE GLGETMYGAGNGATHVVFLTVGTGIGGAVIIDGKLFNGYANRGTELGHVPLIANGEPCAC ECCHHHCCCCCCCEEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCEEEEECCCCCCC GSIGCLEHYASTAALVRRFSKRIAEAGISYPNEEINGELIVRLYKQGDKIAAESLNEHCD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH FLGHGIAGFINIFSPQRVVIGGGLSEAGDFYIQKVSEKALRYAIPDCAVNTEIMAASLGN HHHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCC KAGSIGAASLFLNRKPN CCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]