| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is gluP [H]
Identifier: 29350061
GI number: 29350061
Start: 6088483
End: 6089730
Strand: Reverse
Name: gluP [H]
Synonym: BT_4653
Alternate gene names: 29350061
Gene position: 6089730-6088483 (Counterclockwise)
Preceding gene: 29350062
Following gene: 29350060
Centisome position: 97.27
GC content: 47.36
Gene sequence:
>1248_bases ATGCTGGCGCTGATTATGGCGTTCTGGTTCACTATCTCGTTTATTACCAATATTCTGGGACCGCTTATTCCGGACATTAT CCACAATTTCAATCTGAGCGATCTTGCGATGGCGGGGTTTATCCCGACTTCCTTCTTTCTGGCTTACGCCATTATGTCCA TCCCTGCCGGACTACTGATCGACCGTTTCGGTGAAAAGCCTGTCTTGTTCTGTGGATTCCTGATGCCGTTTATCGGAACC ATCCTGTTCGCCTGTATGCATACTTATCCGATGTTGCTAGCTTCATCTTTCATCATCGGTCTGGGAATGGCAATGCTGCA AACCGTGCTGAATCCGCTCCAACGTACTGTAGGAGGAGAAGAAAACTATGCTTTCATCGCTGAACTGGCACAATTTATGT TCGGTATCGCCTCCTTCCTAAGCCCGTTGGCATATACTTATCTGATTCGGGAACTTGATCCTGCCACTTATACAGCAGGA AAAAGCCTTATCCTTGACTTGCTGGCGGATATGACGCCACAAGATATGCCTTGGGTATCTCTCTACTGGGTATTTACCTT ATTGTTGCTGGTGATGCTGATTGCCGTCGGCGTTTCGCATTTCCCGAAGATTGAACTGAAAGAAGATGAGAAAAGCGGAT CGAAAGATTCCTACCTCGCCCTGTTCAAGCAGAAATATGTATGGTTGTTCTTTCTGGGAATCTTCTGCTATGTCAGTACG GAACAAGGAACCTCTATCTTCATGAGTACCTTCCTCGAACAATATCACGGTGTAAACCCGCAGACGGAAGGTGCGCAGGC AGTCAGCTACTTCTGGGGACTGATGACGGCAGGCTGTCTGGTCGGAATGATTCTTCTGAAACTGATTGACAGCAAACGCC TGCTACAGGTTTCGGGGGTATTGACGATAGTGCTGTTACTAGCCGCTTTATTCGGAAGCAAGGATGTTTCGCTAATCGCC TTTCCTGCTATCGGATTCAGTATTTCCATGATGTACTCTATCGTCTTCTCATTGGCGCTGAACTCGGCTTCACAGCATCA CGGCTCATTTGCCGGAATTTTATGTTCGGCTATCGTGGGTGGAGCAGGCGGGCCGATGATTGTGAGTACATTGGCAGATG CTACGTCCCTGCGTACAGGTATGCTGTCTATCCTGCTCTTTGTGGGATATATCACCTTCATCGGTTTCTGGGCACATCCG CTGATCAACAACAAGACAATCAGTCTGAAAGAACTCTTAAAAAAATAA
Upstream 100 bases:
>100_bases AGTATCGGTGCCGCCTCCCTCTTTTTAAATAGAAAACCGAATTAAATGAAGAGCAGAAAACCTTCTCAACTTATTTAAGA TTATGAAGAAAAATCTAGGA
Downstream 100 bases:
>100_bases GATGATGAAACAACGATATTATATTTTCCTGTTATTTGTAGCTATGCTTTCCTATAGTGGATATGCGCAGAAAAGCATCC TGCGTCTGAGTCAGCAGACG
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MLALIMAFWFTISFITNILGPLIPDIIHNFNLSDLAMAGFIPTSFFLAYAIMSIPAGLLIDRFGEKPVLFCGFLMPFIGT ILFACMHTYPMLLASSFIIGLGMAMLQTVLNPLQRTVGGEENYAFIAELAQFMFGIASFLSPLAYTYLIRELDPATYTAG KSLILDLLADMTPQDMPWVSLYWVFTLLLLVMLIAVGVSHFPKIELKEDEKSGSKDSYLALFKQKYVWLFFLGIFCYVST EQGTSIFMSTFLEQYHGVNPQTEGAQAVSYFWGLMTAGCLVGMILLKLIDSKRLLQVSGVLTIVLLLAALFGSKDVSLIA FPAIGFSISMMYSIVFSLALNSASQHHGSFAGILCSAIVGGAGGPMIVSTLADATSLRTGMLSILLFVGYITFIGFWAHP LINNKTISLKELLKK
Sequences:
>Translated_415_residues MLALIMAFWFTISFITNILGPLIPDIIHNFNLSDLAMAGFIPTSFFLAYAIMSIPAGLLIDRFGEKPVLFCGFLMPFIGT ILFACMHTYPMLLASSFIIGLGMAMLQTVLNPLQRTVGGEENYAFIAELAQFMFGIASFLSPLAYTYLIRELDPATYTAG KSLILDLLADMTPQDMPWVSLYWVFTLLLLVMLIAVGVSHFPKIELKEDEKSGSKDSYLALFKQKYVWLFFLGIFCYVST EQGTSIFMSTFLEQYHGVNPQTEGAQAVSYFWGLMTAGCLVGMILLKLIDSKRLLQVSGVLTIVLLLAALFGSKDVSLIA FPAIGFSISMMYSIVFSLALNSASQHHGSFAGILCSAIVGGAGGPMIVSTLADATSLRTGMLSILLFVGYITFIGFWAHP LINNKTISLKELLKK >Mature_415_residues MLALIMAFWFTISFITNILGPLIPDIIHNFNLSDLAMAGFIPTSFFLAYAIMSIPAGLLIDRFGEKPVLFCGFLMPFIGT ILFACMHTYPMLLASSFIIGLGMAMLQTVLNPLQRTVGGEENYAFIAELAQFMFGIASFLSPLAYTYLIRELDPATYTAG KSLILDLLADMTPQDMPWVSLYWVFTLLLLVMLIAVGVSHFPKIELKEDEKSGSKDSYLALFKQKYVWLFFLGIFCYVST EQGTSIFMSTFLEQYHGVNPQTEGAQAVSYFWGLMTAGCLVGMILLKLIDSKRLLQVSGVLTIVLLLAALFGSKDVSLIA FPAIGFSISMMYSIVFSLALNSASQHHGSFAGILCSAIVGGAGGPMIVSTLADATSLRTGMLSILLFVGYITFIGFWAHP LINNKTISLKELLKK
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=382, Percent_Identity=25.6544502617801, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45526; Mature: 45526
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALIMAFWFTISFITNILGPLIPDIIHNFNLSDLAMAGFIPTSFFLAYAIMSIPAGLLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH DRFGEKPVLFCGFLMPFIGTILFACMHTYPMLLASSFIIGLGMAMLQTVLNPLQRTVGGE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ENYAFIAELAQFMFGIASFLSPLAYTYLIRELDPATYTAGKSLILDLLADMTPQDMPWVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHH LYWVFTLLLLVMLIAVGVSHFPKIELKEDEKSGSKDSYLALFKQKYVWLFFLGIFCYVST HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EQGTSIFMSTFLEQYHGVNPQTEGAQAVSYFWGLMTAGCLVGMILLKLIDSKRLLQVSGV CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LTIVLLLAALFGSKDVSLIAFPAIGFSISMMYSIVFSLALNSASQHHGSFAGILCSAIVG HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHC GAGGPMIVSTLADATSLRTGMLSILLFVGYITFIGFWAHPLINNKTISLKELLKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC >Mature Secondary Structure MLALIMAFWFTISFITNILGPLIPDIIHNFNLSDLAMAGFIPTSFFLAYAIMSIPAGLLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH DRFGEKPVLFCGFLMPFIGTILFACMHTYPMLLASSFIIGLGMAMLQTVLNPLQRTVGGE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ENYAFIAELAQFMFGIASFLSPLAYTYLIRELDPATYTAGKSLILDLLADMTPQDMPWVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHH LYWVFTLLLLVMLIAVGVSHFPKIELKEDEKSGSKDSYLALFKQKYVWLFFLGIFCYVST HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EQGTSIFMSTFLEQYHGVNPQTEGAQAVSYFWGLMTAGCLVGMILLKLIDSKRLLQVSGV CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LTIVLLLAALFGSKDVSLIAFPAIGFSISMMYSIVFSLALNSASQHHGSFAGILCSAIVG HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHC GAGGPMIVSTLADATSLRTGMLSILLFVGYITFIGFWAHPLINNKTISLKELLKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]