Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350063

Identifier: 29350063

GI number: 29350063

Start: 6090900

End: 6092417

Strand: Reverse

Name: 29350063

Synonym: BT_4655

Alternate gene names: NA

Gene position: 6092417-6090900 (Counterclockwise)

Preceding gene: 29350064

Following gene: 29350062

Centisome position: 97.32

GC content: 49.74

Gene sequence:

>1518_bases
ATGCCATCGGCAAGTGACCTCAAAATGTACTGGGGAGACCTGCACAACCATTGTAACATCACATACGGACACGGCGATAT
GCGCGATGCTTTTGAAGCAGCGAAAGGACAGTTGGATTTTGTAAGTGTAACACCCCACGCCATGTGGCCGGATATCCCCG
GAGCAGACGATCCACGCCTGAAATGGGTAATCGACTACCATACCGGTGCTTTCAAACGTTTGCGCGAAGGCGGATATGAG
AAGTACGTAGCCATGACAAACGAATATAATAAAGAAGGAGAATTCCTCACTTTCGTTGGATATGAAGCACACAGCATGGA
ACATGGCGACCATGTTGCCTTGAACTACGATCTCGATGCACCGCTTGTAGAGTGTACCTCCATCGAAGACTGGAAACAGA
AAGCCAAAGGACACAAAGTATTTATCACTCCTCACCATATGGGCTATCAGGGTGGTTATCGCGGCTATAACTGGAAATGC
TTTACCGAAGGAGACCAGACCCCGTTCGTAGAAATGTATTCCCGTCACGGTCTGGCCGAAAGCGATCAGGGGGACTATCC
ATACTTGCACGATATGGGCCCCCGCCAATGGGAAGGAACCATTCAATATGGTCTGGAACTGGGTAATAAATTCGGTATTA
TGGCTTCTACCGACCAACATTCGGGTTATCCGGGCAGTTATGGTGACGGCCGTATCGGTGTACTGGCTCCGTCATTGACC
CGCGACGCTATATGGGAAGCACTTCGGACCCGCCACGTATGCGCCGCAACCGGCGATAAAATTTTGATTGACTTCCGCCT
CAACGATGCTTTCATGGGTGACGTAGTGCGTGGCAACAGCCGCCGCATTTATCTGAATGTTACCGGAGAAAGTTGCATCG
ACTATGTGGATATCGTCAAGAACGGTCAGATTCTGGCCCGCATGAATGGTCCGTTGACTCCGGTTGCCCCCGAAGGTGAT
ACTGTCCGCTGCAAAGTGAAAGTAGATTTCGGATGGAACCGTGAAGAGCAGTATGTACACTGGCAAGGTAAATTGTCTGT
AGACAAAGGACGCATTCTGAGCGTCACTCCATGTTTCCGCGGTGCAGCCTTCACTTCTCCGCAAGAAGGGGAAACAGAAT
TCCATACTCACGTAAACCGCATTGTATCCGCAGACGAAAAAGAAACCGAACTGGATATGTACAGCAGCAAGAATCCGAAT
ACGACTACCGCTGCCATGCAAGCTGTCATCCTCGAAGTAGAGATGCCGAAAGACGGAAAAGTGATTGCTGATTTCAACGG
CAAGAAGTTTGAACACACATTGGGCGAATTGCTCGAAGGCTCACGTTCGCACTTCATGATCGGCTGGCTGAGCGAAGCGA
TTCTCTTCAATCGTGCTATGCCCGAAAGCTGTTTCACTGTGGAACACTATATGGAAGATAAAGAGCCTCAGCGTGATACA
GATTACTACTACGTGCGTGTTCGCCAGCGTGACGGGCAATGGGCATGGAGTTCACCTATCTGGGCAGAAAGAGTATAA

Upstream 100 bases:

>100_bases
AAATTTTATAAAGAATACTGGCTGGTCTTTTTTAGGACTGGCAGCATCCGGCAGCCTGCTCGGCTCTTGTGCGGCAGGAA
GTAAAGAAGCCAAAAAGAAA

Downstream 100 bases:

>100_bases
ACTGGTATATGAAAGAAAACAGTTGCTTTGCTTGTGCCAAGCCGTTGGCACAGTTGTGTCAAGCTGTTGGCACTGCTATG
CCAAGCCTTTGGCACAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MPSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRLKWVIDYHTGAFKRLREGGYE
KYVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDAPLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKC
FTEGDQTPFVEMYSRHGLAESDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLT
RDAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVKNGQILARMNGPLTPVAPEGD
TVRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFRGAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPN
TTTAAMQAVILEVEMPKDGKVIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDT
DYYYVRVRQRDGQWAWSSPIWAERV

Sequences:

>Translated_505_residues
MPSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRLKWVIDYHTGAFKRLREGGYE
KYVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDAPLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKC
FTEGDQTPFVEMYSRHGLAESDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLT
RDAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVKNGQILARMNGPLTPVAPEGD
TVRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFRGAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPN
TTTAAMQAVILEVEMPKDGKVIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDT
DYYYVRVRQRDGQWAWSSPIWAERV
>Mature_504_residues
PSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRLKWVIDYHTGAFKRLREGGYEK
YVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDAPLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKCF
TEGDQTPFVEMYSRHGLAESDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLTR
DAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVKNGQILARMNGPLTPVAPEGDT
VRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFRGAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPNT
TTAAMQAVILEVEMPKDGKVIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDTD
YYYVRVRQRDGQWAWSSPIWAERV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57474; Mature: 57343

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRL
CCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCE
KWVIDYHTGAFKRLREGGYEKYVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDA
EEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC
PLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKCFTEGDQTPFVEMYSRHGLAE
CEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCC
SDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLT
CCCCCCCCHHCCCCCCCCCCEEEEHHCCCEECEEEECCCCCCCCCCCCCCEEEEECCCHH
RDAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVK
HHHHHHHHHHCEEEEECCCEEEEEEEECCCEECCEEECCCCEEEEEECCHHHHHHHHHHC
NGQILARMNGPLTPVAPEGDTVRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFR
CCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEECCCCC
GAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPNTTTAAMQAVILEVEMPKDGK
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHCCCCCCHHHHEEEEEEEEEECCCCCC
VIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDT
EEECCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
DYYYVRVRQRDGQWAWSSPIWAERV
CEEEEEEEECCCCEEECCCCHHCCC
>Mature Secondary Structure 
PSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRL
CCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCE
KWVIDYHTGAFKRLREGGYEKYVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDA
EEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC
PLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKCFTEGDQTPFVEMYSRHGLAE
CEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCC
SDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLT
CCCCCCCCHHCCCCCCCCCCEEEEHHCCCEECEEEECCCCCCCCCCCCCCEEEEECCCHH
RDAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVK
HHHHHHHHHHCEEEEECCCEEEEEEEECCCEECCEEECCCCEEEEEECCHHHHHHHHHHC
NGQILARMNGPLTPVAPEGDTVRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFR
CCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEECCCCC
GAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPNTTTAAMQAVILEVEMPKDGK
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHCCCCCCHHHHEEEEEEEEEECCCCCC
VIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDT
EEECCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
DYYYVRVRQRDGQWAWSSPIWAERV
CEEEEEEEECCCCEEECCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA