Click here to switch to the map view.

The map label for this gene is 29350038

Identifier: 29350038

GI number: 29350038

Start: 6060322

End: 6061863

Strand: Reverse

Name: 29350038

Synonym: BT_4630

Alternate gene names: NA

Gene position: 6061863-6060322 (Counterclockwise)

Preceding gene: 29350039

Following gene: 29350037

Centisome position: 96.83

GC content: 42.87

Gene sequence:

>1542_bases
ATGCAAATACATAACAATACATTGATAGTGGAATGCTCGGCTTACGATTTCAAGGAAATGCTGGAACGTAAGAAAGTAAA
GTCATGGCTTAAATCCGTGTCGGCTTTTGCCAATACGGACGGTGGCAGTTTGTTTTATGGAGTGAATGATGAAGGTGTAA
TTGTAGGGTTGGAGAATCCACAAGCCGATGCTGATTTTATCAGTGAAATGATGAAGGCACGACTTGACCCTGTGCCGGAA
GTTCAGCTTATTCCGATAGAACACGAAGGGCATACCCTGCTTGAAGTGAAAGTAAAGGCAGGAACGCTTACACCTTATTA
CTATTATCAGGATGGGACACGTACCGCATATGTACGAGTTGGCAATGAAAGTGTAGAATGCAACTCCCAACAATTACTTT
CGTTGGTATTAAAAGGCACGCACATGACATGGGATTCTCTTCCTACCCAAGTGGATGCCGGCAAACATTCTTTCATCATC
CTTGCCAATACTTTCCGTGAGCAAACCCATCAAGAATGGAACGACAAGTATCTGGAATCATTCGGACTAGTAACTCCTGA
CGGCAAACTGACCAATGCAGGATTGCTGTTTGTGGATAATTGCACGGTATTTCAATCGCGTATTTTCTGCACCCGTTGGA
CTGGACTCTATAAGGATGATGCCATCAGTTCCGTAGAACATCGGGCTAACCTTGTGCTGCTCTTAAAATATGGTATGGAT
TTCATCAAAAACTATACCATGAGCGGCTGGGTGAAGATGCCAAACTATCGCCTTAACCTCCCCGACTATTCCGACCGTGC
CATCTTTGAAGGACTGGTAAACCACCTTATCCATAGAGATTATACTATAATGGGCGGTGAAGTACATATCGACATTTATG
ATGACCGCGTAGAACTGGTATCACCTGGTGCTATGCTTGACGGTACACAAATTCAAGACCGTGACATATACAAAGTGCCG
TCCATGCGTCGTAATCCTGTCATTGCAGATGTGTTCACACAGTTGGATTATATGGAGAAACGTGGTTCCGGTTTACGCAA
AATGCGAGAGCTTACAGAGAAATTACCTAATTTCTTGCAAGGCAAAGAACCGCAATATCAAACGGAAGCGACCTCTTTCT
ACACCACGTTCTATAATTTGAACTGGAACGAAAGCGGAAGAATACCTGTAGAGGAAGTAGCCAACAGGGTAAATAGTACC
CTCGAAAAGTACCCTGTAAACGAAGAAAGTTCGGTCGAAAAGTTCGGTGTAAACACAAAAGAGTTCGGTGTAAATGAAGA
AAGTTCGGTCGAAAAGTTCGGTGTAAATGCGGATAAGTTCGGAGATACATCGGAAACACAGAAGAAAGTCAGTAAAACTG
CACAAAAGATAATCGACCTCGTTATTTCAGATCCTTCAATCACAGCTGATAATATGGCCAACAAGATTGGTGTAACTAAA
CGCGCTATAGAGAAAAATATCAAGAGCCTTAGGGGTATGGGAATTTTGGTTCACGAAGGTTCAGACAAGGCTGGTTATTG
GCGCATTATTGTTAAACCATAA

Upstream 100 bases:

>100_bases
AAAATCAAAAGAAAGCGATGTTTTTAACAGATTCTTCGGTTTTATCCTTACCTTTGTGTATGATATTGGGATATTATACC
CGAACAACAATAAGGAAACT

Downstream 100 bases:

>100_bases
ACAGAACAACAAACCTATGGAGACCTCTTTCATACCACTCTTTGCAATCATAGCCGTTTTGATTATCGCCTTTTTGTTTG
CCTCTTTGCCACAGGTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; Divergent AAA Domain Protein; ATP-Dependent DNA Helicase RecG; Divergent AAA Domain-Containing Protein; Divergent AAA ATP; Restriction Gene; Xin-Antitoxin System Toxin Component Fic Family; Crp Family Transcriptional Regulator; ATP-Dependent DNA Helicase Protein; AAA-4 Family Protein; Transcription Regulator HTH/DeoR Family

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MQIHNNTLIVECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDEGVIVGLENPQADADFISEMMKARLDPVPE
VQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRVGNESVECNSQQLLSLVLKGTHMTWDSLPTQVDAGKHSFII
LANTFREQTHQEWNDKYLESFGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD
FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTIMGGEVHIDIYDDRVELVSPGAMLDGTQIQDRDIYKVP
SMRRNPVIADVFTQLDYMEKRGSGLRKMRELTEKLPNFLQGKEPQYQTEATSFYTTFYNLNWNESGRIPVEEVANRVNST
LEKYPVNEESSVEKFGVNTKEFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK
RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP

Sequences:

>Translated_513_residues
MQIHNNTLIVECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDEGVIVGLENPQADADFISEMMKARLDPVPE
VQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRVGNESVECNSQQLLSLVLKGTHMTWDSLPTQVDAGKHSFII
LANTFREQTHQEWNDKYLESFGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD
FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTIMGGEVHIDIYDDRVELVSPGAMLDGTQIQDRDIYKVP
SMRRNPVIADVFTQLDYMEKRGSGLRKMRELTEKLPNFLQGKEPQYQTEATSFYTTFYNLNWNESGRIPVEEVANRVNST
LEKYPVNEESSVEKFGVNTKEFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK
RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP
>Mature_513_residues
MQIHNNTLIVECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDEGVIVGLENPQADADFISEMMKARLDPVPE
VQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRVGNESVECNSQQLLSLVLKGTHMTWDSLPTQVDAGKHSFII
LANTFREQTHQEWNDKYLESFGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD
FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTIMGGEVHIDIYDDRVELVSPGAMLDGTQIQDRDIYKVP
SMRRNPVIADVFTQLDYMEKRGSGLRKMRELTEKLPNFLQGKEPQYQTEATSFYTTFYNLNWNESGRIPVEEVANRVNST
LEKYPVNEESSVEKFGVNTKEFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK
RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58242; Mature: 58242

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIHNNTLIVECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDEGVIVGLENP
CEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCC
QADADFISEMMKARLDPVPEVQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRV
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCEEEEEEE
GNESVECNSQQLLSLVLKGTHMTWDSLPTQVDAGKHSFIILANTFREQTHQEWNDKYLES
CCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
FGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD
CCCCCCCCCEECCCEEEEECCHHHHHHEEEEECCCCCCHHHHHHHHHHCCEEEEEHHCHH
FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTIMGGEVHIDIYDDRVELV
HHHCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEEEECCCEEEE
SPGAMLDGTQIQDRDIYKVPSMRRNPVIADVFTQLDYMEKRGSGLRKMRELTEKLPNFLQ
CCCCEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
GKEPQYQTEATSFYTTFYNLNWNESGRIPVEEVANRVNSTLEKYPVNEESSVEKFGVNTK
CCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH
EFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK
HCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP
HHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MQIHNNTLIVECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDEGVIVGLENP
CEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCC
QADADFISEMMKARLDPVPEVQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRV
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCEEEEEEE
GNESVECNSQQLLSLVLKGTHMTWDSLPTQVDAGKHSFIILANTFREQTHQEWNDKYLES
CCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
FGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD
CCCCCCCCCEECCCEEEEECCHHHHHHEEEEECCCCCCHHHHHHHHHHCCEEEEEHHCHH
FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTIMGGEVHIDIYDDRVELV
HHHCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEEEECCCEEEE
SPGAMLDGTQIQDRDIYKVPSMRRNPVIADVFTQLDYMEKRGSGLRKMRELTEKLPNFLQ
CCCCEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
GKEPQYQTEATSFYTTFYNLNWNESGRIPVEEVANRVNSTLEKYPVNEESSVEKFGVNTK
CCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH
EFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK
HCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP
HHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA