| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29350037
Identifier: 29350037
GI number: 29350037
Start: 6059601
End: 6060305
Strand: Reverse
Name: 29350037
Synonym: BT_4629
Alternate gene names: NA
Gene position: 6060305-6059601 (Counterclockwise)
Preceding gene: 29350038
Following gene: 29350036
Centisome position: 96.8
GC content: 37.59
Gene sequence:
>705_bases ATGGAGACCTCTTTCATACCACTCTTTGCAATCATAGCCGTTTTGATTATCGCCTTTTTGTTTGCCTCTTTGCCACAGGT AAACCATAAAACGCGATACCGAGTGCTTTATGCAATAGCCATTATCATGCTATTAGCTGTTATCCCTATTAGTGAATATA TGGCTGGTGGCATACAAAACTCAAGTAACAATTATCTGCTTGTCCTAATATTCGATATTGCAGTAGGATATTTCTGTATG TACATTGCTGCTTTGCTAAAATTCAACGTTCTTAAACGAAAGAACCAAGCATTAGAAAACGCCTTGACAGAAAAGCAACA AGAAAATGTAGCAATCCTATTGGAGCATCAAAACGAAAAACAACAAGCACTCCGGCAAAGAGAGCTTGAATGGTTAGCTG GGAAAATAAAGATGTTTACCGAAGAAGAACAGGAAGCTATTCTTGCCAGTGCTCTATCATTTGCTGAACATGACTTGATA GTTGCTCCCTCAATAAGCATACAACCTAAAGAAACATGTAGTCAGCAAGAACTAATGTACTTTGTCTGCTCTGCTTTTTA CAATATGGATAAAAGTCGTAGTGAAGTTGTGGGTTTCTTATATAAAGTTTTTCCTCTCTATTTTCCAGCAGGAGAAAGTG CATTGGCTAAAAAGATGCCGGGATTGGAAAAAGTAAAAGAGAGGAGAGAGAAAGAATGTAATTAG
Upstream 100 bases:
>100_bases ATCAAGAGCCTTAGGGGTATGGGAATTTTGGTTCACGAAGGTTCAGACAAGGCTGGTTATTGGCGCATTATTGTTAAACC ATAAACAGAACAACAAACCT
Downstream 100 bases:
>100_bases CGCATATTTTCAAACCATAGAATAGAATTAAAATGAATAATACACTTATAGATAATTCCATAGAAGCACTTTCAATGACA ACAACATTGAGAAAATGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues METSFIPLFAIIAVLIIAFLFASLPQVNHKTRYRVLYAIAIIMLLAVIPISEYMAGGIQNSSNNYLLVLIFDIAVGYFCM YIAALLKFNVLKRKNQALENALTEKQQENVAILLEHQNEKQQALRQRELEWLAGKIKMFTEEEQEAILASALSFAEHDLI VAPSISIQPKETCSQQELMYFVCSAFYNMDKSRSEVVGFLYKVFPLYFPAGESALAKKMPGLEKVKERREKECN
Sequences:
>Translated_234_residues METSFIPLFAIIAVLIIAFLFASLPQVNHKTRYRVLYAIAIIMLLAVIPISEYMAGGIQNSSNNYLLVLIFDIAVGYFCM YIAALLKFNVLKRKNQALENALTEKQQENVAILLEHQNEKQQALRQRELEWLAGKIKMFTEEEQEAILASALSFAEHDLI VAPSISIQPKETCSQQELMYFVCSAFYNMDKSRSEVVGFLYKVFPLYFPAGESALAKKMPGLEKVKERREKECN >Mature_234_residues METSFIPLFAIIAVLIIAFLFASLPQVNHKTRYRVLYAIAIIMLLAVIPISEYMAGGIQNSSNNYLLVLIFDIAVGYFCM YIAALLKFNVLKRKNQALENALTEKQQENVAILLEHQNEKQQALRQRELEWLAGKIKMFTEEEQEAILASALSFAEHDLI VAPSISIQPKETCSQQELMYFVCSAFYNMDKSRSEVVGFLYKVFPLYFPAGESALAKKMPGLEKVKERREKECN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26675; Mature: 26675
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSFIPLFAIIAVLIIAFLFASLPQVNHKTRYRVLYAIAIIMLLAVIPISEYMAGGIQN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSNNYLLVLIFDIAVGYFCMYIAALLKFNVLKRKNQALENALTEKQQENVAILLEHQNEK CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHH QQALRQRELEWLAGKIKMFTEEEQEAILASALSFAEHDLIVAPSISIQPKETCSQQELMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHCCHHHHHH FVCSAFYNMDKSRSEVVGFLYKVFPLYFPAGESALAKKMPGLEKVKERREKECN HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure METSFIPLFAIIAVLIIAFLFASLPQVNHKTRYRVLYAIAIIMLLAVIPISEYMAGGIQN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSNNYLLVLIFDIAVGYFCMYIAALLKFNVLKRKNQALENALTEKQQENVAILLEHQNEK CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHH QQALRQRELEWLAGKIKMFTEEEQEAILASALSFAEHDLIVAPSISIQPKETCSQQELMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHCCHHHHHH FVCSAFYNMDKSRSEVVGFLYKVFPLYFPAGESALAKKMPGLEKVKERREKECN HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA