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The map label for this gene is deoD [H]

Identifier: 29349962

GI number: 29349962

Start: 5976231

End: 5977109

Strand: Reverse

Name: deoD [H]

Synonym: BT_4554

Alternate gene names: 29349962

Gene position: 5977109-5976231 (Counterclockwise)

Preceding gene: 29349963

Following gene: 29349959

Centisome position: 95.48

GC content: 45.28

Gene sequence:

>879_bases
ATGAAAAAGTACTTTCCATCCTCTGAACTGATTATCAACGAAGACGGCTCGGTATTCCATCTTCACGTAAAGCCCGAATG
GCTGGCAGATAAAGTGATCCTTGTAGGAGATCCAGGACGTGTAGCACTCGTAGCTTCTCACTTTGAAAACAAAGAATGCG
AAGTGGAAAGCCGCGAATTCAAAACAATCACGGGTACATATAAAGGTAAACGAATCACAGTGGTTTCTACCGGAATTGGT
TGCGACAATATCGACATCGTTATGAACGAACTGGATGCACTTGCCAACATCAACTTTGAGACACGGGAAGAAAAAGAAAA
GTTCCGCCAACTGGAGTTAGTACGTATCGGTACGTGCGGCGGCTTGCAGCCAAATACTCCGGTAGGCACCTTCGTTTGTT
CACAGAAATCTATCGGTTTCGACGGATTATTGAATTTTTACGCCGGACGCAATGCGGTATGCGATCTTCCTTTCGAACGT
GCTTTCCTTAATCACATGGGCTGGTCGGGAAATATGTGTGCCCCTGCGCCTTATGTTATTGATGCCAGTGAAGAACTGAT
TGACCGGATTGCTAAAGAAGATATGGTACGTGGTGTAACGATTGCCGCGGGAGGCTTCTTTGGGCCACAAGGACGTGAGC
TCCGTATTCCGTTAGCGGACCCGAAACAAAATGATAAGATTGAAGCATTTGAATATAAAGGCTTTAAGATTACCAACTTC
GAAATGGAAAGTTCGGCACTTGCAGGACTTAGCCGACTGATGGGGCATAAGGCAATGACCGTCTGCATGGTGATAGCCAA
CCGACTGATCAAAGAGGCTAATACCGGATATAAGAATACAATCGATACACTGATTAAGACTGTACTCGACAGAATATAG

Upstream 100 bases:

>100_bases
TTGCAAAAGAAAAGAAAGATACCTCTTCCGAACTAAAATCCGGTTCCGGCGTTTCTATTTATATATACGACTTATTGTAA
AACTAAAACCGTTCAATAAC

Downstream 100 bases:

>100_bases
GATAATATATCCATCATAACAAAATGGCTTGAATCATACTCTGTATTGTATGTTTCAAGCCATTTTTTCATTAATATCCA
ATCGTAAATCTCTCTTGGTG

Product: purine nucleoside phosphorylase II

Products: NA

Alternate protein names: PNP; Purine nucleoside phosphorylase II; PU-NPase II [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKKYFPSSELIINEDGSVFHLHVKPEWLADKVILVGDPGRVALVASHFENKECEVESREFKTITGTYKGKRITVVSTGIG
CDNIDIVMNELDALANINFETREEKEKFRQLELVRIGTCGGLQPNTPVGTFVCSQKSIGFDGLLNFYAGRNAVCDLPFER
AFLNHMGWSGNMCAPAPYVIDASEELIDRIAKEDMVRGVTIAAGGFFGPQGRELRIPLADPKQNDKIEAFEYKGFKITNF
EMESSALAGLSRLMGHKAMTVCMVIANRLIKEANTGYKNTIDTLIKTVLDRI

Sequences:

>Translated_292_residues
MKKYFPSSELIINEDGSVFHLHVKPEWLADKVILVGDPGRVALVASHFENKECEVESREFKTITGTYKGKRITVVSTGIG
CDNIDIVMNELDALANINFETREEKEKFRQLELVRIGTCGGLQPNTPVGTFVCSQKSIGFDGLLNFYAGRNAVCDLPFER
AFLNHMGWSGNMCAPAPYVIDASEELIDRIAKEDMVRGVTIAAGGFFGPQGRELRIPLADPKQNDKIEAFEYKGFKITNF
EMESSALAGLSRLMGHKAMTVCMVIANRLIKEANTGYKNTIDTLIKTVLDRI
>Mature_292_residues
MKKYFPSSELIINEDGSVFHLHVKPEWLADKVILVGDPGRVALVASHFENKECEVESREFKTITGTYKGKRITVVSTGIG
CDNIDIVMNELDALANINFETREEKEKFRQLELVRIGTCGGLQPNTPVGTFVCSQKSIGFDGLLNFYAGRNAVCDLPFER
AFLNHMGWSGNMCAPAPYVIDASEELIDRIAKEDMVRGVTIAAGGFFGPQGRELRIPLADPKQNDKIEAFEYKGFKITNF
EMESSALAGLSRLMGHKAMTVCMVIANRLIKEANTGYKNTIDTLIKTVLDRI

Specific function: Cleavage of adenosine and its derivatives [H]

COG id: COG2820

COG function: function code F; Uridine phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 32436; Mature: 32436

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYFPSSELIINEDGSVFHLHVKPEWLADKVILVGDPGRVALVASHFENKECEVESREF
CCCCCCCCCEEEECCCCEEEEEECCCHHHCEEEEEECCCCEEEEEECCCCCCCCCCCCCE
KTITGTYKGKRITVVSTGIGCDNIDIVMNELDALANINFETREEKEKFRQLELVRIGTCG
EEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCC
GLQPNTPVGTFVCSQKSIGFDGLLNFYAGRNAVCDLPFERAFLNHMGWSGNMCAPAPYVI
CCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCCCCCCCEEE
DASEELIDRIAKEDMVRGVTIAAGGFFGPQGRELRIPLADPKQNDKIEAFEYKGFKITNF
CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEE
EMESSALAGLSRLMGHKAMTVCMVIANRLIKEANTGYKNTIDTLIKTVLDRI
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKYFPSSELIINEDGSVFHLHVKPEWLADKVILVGDPGRVALVASHFENKECEVESREF
CCCCCCCCCEEEECCCCEEEEEECCCHHHCEEEEEECCCCEEEEEECCCCCCCCCCCCCE
KTITGTYKGKRITVVSTGIGCDNIDIVMNELDALANINFETREEKEKFRQLELVRIGTCG
EEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCC
GLQPNTPVGTFVCSQKSIGFDGLLNFYAGRNAVCDLPFERAFLNHMGWSGNMCAPAPYVI
CCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCCCCCCCEEE
DASEELIDRIAKEDMVRGVTIAAGGFFGPQGRELRIPLADPKQNDKIEAFEYKGFKITNF
CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEE
EMESSALAGLSRLMGHKAMTVCMVIANRLIKEANTGYKNTIDTLIKTVLDRI
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]