Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349963

Identifier: 29349963

GI number: 29349963

Start: 5977272

End: 5978273

Strand: Reverse

Name: 29349963

Synonym: BT_4555

Alternate gene names: NA

Gene position: 5978273-5977272 (Counterclockwise)

Preceding gene: 29349964

Following gene: 29349962

Centisome position: 95.49

GC content: 46.71

Gene sequence:

>1002_bases
ATGGAAACATCTTTGTACTTACCTATCGTTCTGATTGTTGGAGGTATTATTTTCCTAATACTATTTTTCCATTATGTGCC
GTTCTTCCTTTGGTTGTCGGCTAAAGTATCAGGCGTTAACATCTCGTTGATTCAACTCTTCCTGATGCGCATCCGTAATG
TTCCGCCGTATATCATTGTTCCGGGCATGATCGAAGCCCACAAAGCCGGATTGAAGAACATCACCCGTGATGAACTGGAA
GCCCACTACCTTGCCGGAGGCCATGTAGAAAAAGTAGTACATGCGCTGGTATCCGCATCGAAAGCCAACATTGAGCTGTC
ATTCCAGATGGCAACCGCTATCGACCTTGCCGGACGTGATGTGTTTGAAGCTGTTCAGATGTCTGTAAACCCGAAAGTGA
TTGATACTCCTCCTGTTACTGCAGTAGCCAAAGACGGTATCCAGCTGATAGCGAAAGCTCGTGTAACAGTACGTGCCAGC
ATCAAGCAGCTGGTCGGTGGTGCCGGAGAAGATACCATCCTTGCCCGTGTAGGTGAAGGTATCGTTTCCTCTATCGGTTC
TTCGGAAAACCACAAGTCAGTACTCGAAAATCCGGATTCTATCTCTAAACTTGTACTCCGCAAGGGATTGGATGCAGGAA
CAGCTTTCGAAATTCTGTCTATTGATATCGCGGATATCGATATAGGTAAAAACATTGGTGCAGCTTTGCAGATTGACCAG
GCTAATGCAGACAAGAACATCGCACAGGCTAAAGCAGAAGAACGCCGTGCAATGGCTGTCGCTTCCGAACAGGAAATGAA
AGCTAAGGCACAGGAAGCACGTGCCAAAGTAATCGAAGCGGAAGCGGAAGTACCTAAAGCAATGGCAGAGGCCTTCCGTA
GCGGCAATCTGGGTATAATGGATTATTACCGTATGAAAAATATCGAAGCCGATACTTCAATGCGCGAAAACATTGCCAAA
CCAACGACTGGTGGTACCACCAACCAGCCTTTGAGTAAATAG

Upstream 100 bases:

>100_bases
TCCTCAATGAAAAAACTCCCATCATTGTGAGCCGCATCACTGACGGTACCATTCTAGTTGAGAAACACAAAATATAATAT
TCACTTAATATAAATTATCA

Downstream 100 bases:

>100_bases
TCTACCAAACGCTGGAACCCGATTCCTATTCAGTTCATCTGCGTATCTTCTCTTTGACAAACTTGCAAAAGAAAAGAAAG
ATACCTCTTCCGAACTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIVPGMIEAHKAGLKNITRDELE
AHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRDVFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRAS
IKQLVGGAGEDTILARVGEGIVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ
ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIMDYYRMKNIEADTSMRENIAK
PTTGGTTNQPLSK

Sequences:

>Translated_333_residues
METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIVPGMIEAHKAGLKNITRDELE
AHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRDVFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRAS
IKQLVGGAGEDTILARVGEGIVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ
ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIMDYYRMKNIEADTSMRENIAK
PTTGGTTNQPLSK
>Mature_333_residues
METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIVPGMIEAHKAGLKNITRDELE
AHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRDVFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRAS
IKQLVGGAGEDTILARVGEGIVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ
ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIMDYYRMKNIEADTSMRENIAK
PTTGGTTNQPLSK

Specific function: Unknown

COG id: COG4864

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0365 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022853 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35887; Mature: 35887

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEE
PGMIEAHKAGLKNITRDELEAHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRD
CCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHH
VFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRASIKQLVGGAGEDTILARVGEG
HHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ
HHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEC
ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
DYYRMKNIEADTSMRENIAKPTTGGTTNQPLSK
HHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEE
PGMIEAHKAGLKNITRDELEAHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRD
CCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHH
VFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRASIKQLVGGAGEDTILARVGEG
HHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ
HHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEC
ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
DYYRMKNIEADTSMRENIAKPTTGGTTNQPLSK
HHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA