| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349963
Identifier: 29349963
GI number: 29349963
Start: 5977272
End: 5978273
Strand: Reverse
Name: 29349963
Synonym: BT_4555
Alternate gene names: NA
Gene position: 5978273-5977272 (Counterclockwise)
Preceding gene: 29349964
Following gene: 29349962
Centisome position: 95.49
GC content: 46.71
Gene sequence:
>1002_bases ATGGAAACATCTTTGTACTTACCTATCGTTCTGATTGTTGGAGGTATTATTTTCCTAATACTATTTTTCCATTATGTGCC GTTCTTCCTTTGGTTGTCGGCTAAAGTATCAGGCGTTAACATCTCGTTGATTCAACTCTTCCTGATGCGCATCCGTAATG TTCCGCCGTATATCATTGTTCCGGGCATGATCGAAGCCCACAAAGCCGGATTGAAGAACATCACCCGTGATGAACTGGAA GCCCACTACCTTGCCGGAGGCCATGTAGAAAAAGTAGTACATGCGCTGGTATCCGCATCGAAAGCCAACATTGAGCTGTC ATTCCAGATGGCAACCGCTATCGACCTTGCCGGACGTGATGTGTTTGAAGCTGTTCAGATGTCTGTAAACCCGAAAGTGA TTGATACTCCTCCTGTTACTGCAGTAGCCAAAGACGGTATCCAGCTGATAGCGAAAGCTCGTGTAACAGTACGTGCCAGC ATCAAGCAGCTGGTCGGTGGTGCCGGAGAAGATACCATCCTTGCCCGTGTAGGTGAAGGTATCGTTTCCTCTATCGGTTC TTCGGAAAACCACAAGTCAGTACTCGAAAATCCGGATTCTATCTCTAAACTTGTACTCCGCAAGGGATTGGATGCAGGAA CAGCTTTCGAAATTCTGTCTATTGATATCGCGGATATCGATATAGGTAAAAACATTGGTGCAGCTTTGCAGATTGACCAG GCTAATGCAGACAAGAACATCGCACAGGCTAAAGCAGAAGAACGCCGTGCAATGGCTGTCGCTTCCGAACAGGAAATGAA AGCTAAGGCACAGGAAGCACGTGCCAAAGTAATCGAAGCGGAAGCGGAAGTACCTAAAGCAATGGCAGAGGCCTTCCGTA GCGGCAATCTGGGTATAATGGATTATTACCGTATGAAAAATATCGAAGCCGATACTTCAATGCGCGAAAACATTGCCAAA CCAACGACTGGTGGTACCACCAACCAGCCTTTGAGTAAATAG
Upstream 100 bases:
>100_bases TCCTCAATGAAAAAACTCCCATCATTGTGAGCCGCATCACTGACGGTACCATTCTAGTTGAGAAACACAAAATATAATAT TCACTTAATATAAATTATCA
Downstream 100 bases:
>100_bases TCTACCAAACGCTGGAACCCGATTCCTATTCAGTTCATCTGCGTATCTTCTCTTTGACAAACTTGCAAAAGAAAAGAAAG ATACCTCTTCCGAACTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIVPGMIEAHKAGLKNITRDELE AHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRDVFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRAS IKQLVGGAGEDTILARVGEGIVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIMDYYRMKNIEADTSMRENIAK PTTGGTTNQPLSK
Sequences:
>Translated_333_residues METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIVPGMIEAHKAGLKNITRDELE AHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRDVFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRAS IKQLVGGAGEDTILARVGEGIVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIMDYYRMKNIEADTSMRENIAK PTTGGTTNQPLSK >Mature_333_residues METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIVPGMIEAHKAGLKNITRDELE AHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRDVFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRAS IKQLVGGAGEDTILARVGEGIVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIMDYYRMKNIEADTSMRENIAK PTTGGTTNQPLSK
Specific function: Unknown
COG id: COG4864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0365 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022853 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35887; Mature: 35887
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEE PGMIEAHKAGLKNITRDELEAHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRD CCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHH VFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRASIKQLVGGAGEDTILARVGEG HHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ HHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEC ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE DYYRMKNIEADTSMRENIAKPTTGGTTNQPLSK HHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure METSLYLPIVLIVGGIIFLILFFHYVPFFLWLSAKVSGVNISLIQLFLMRIRNVPPYIIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEE PGMIEAHKAGLKNITRDELEAHYLAGGHVEKVVHALVSASKANIELSFQMATAIDLAGRD CCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHH VFEAVQMSVNPKVIDTPPVTAVAKDGIQLIAKARVTVRASIKQLVGGAGEDTILARVGEG HHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IVSSIGSSENHKSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAALQIDQ HHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEC ANADKNIAQAKAEERRAMAVASEQEMKAKAQEARAKVIEAEAEVPKAMAEAFRSGNLGIM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE DYYRMKNIEADTSMRENIAKPTTGGTTNQPLSK HHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA