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The map label for this gene is ydeN [H]

Identifier: 29349204

GI number: 29349204

Start: 4932050

End: 4933606

Strand: Reverse

Name: ydeN [H]

Synonym: BT_3796

Alternate gene names: 29349204

Gene position: 4933606-4932050 (Counterclockwise)

Preceding gene: 29349205

Following gene: 29349201

Centisome position: 78.81

GC content: 49.39

Gene sequence:

>1557_bases
ATGAACAAAAAAATACTTTTCCCCCTCGCACTCGTGCCACTGGCTGCCACCGGCCTGCAAACACAGAAGTCTGCCCAGAC
ACAGCGTGTGGACAAACGCCCCAACATCATCCTTTTCATGGTAGACGACATGGGATGGCAAGACACTTCACTCCCCTTCT
GGACACAAAAGACAGATTACAATAAGCTGTACGAAACACCCAACATGGAACGACTTGCCAAACAAGGCATGATGTTCACA
CAAGCGTATGCCAGCAGTATCAGTTCCCCCACCCGATGCAGCCTCATCACCGGAACGAACGCGGCACGCCACCGGGTAAC
CAACTGGACGCTGCAAAAGAACACAAAGACAGACCGCAAGGATAAAGTACTGGATGTGCCGGACTGGAACTACAACGGAG
TAAGCCAAGTGCCCGGCACCAACAACACATTCGTAGGAACCTCCTTCGTACAACTACTGAAAGACAGCGGCTATCATACG
ATTCATTGCGGAAAAGCACATTTCGGTGCCATAGACACTCCGGGAGAAGACCCGCACCACTGGGGCTTCGAAGTAAACAT
AGCCGGACATGCTGCCGGAGGACTCGCCAGCTATCTGGGAGAAGAGAATTACGGTCACAACAAAGACGGAAAGCCAATAT
CACTCATGGCCGTTCCCGGACTTGAAAAGTACTGGGGTACGGAGACCTTCGTCACCGAAGCATTAACTCTGGAAGCCATC
AAAGCTCTGAACAAAGCTAAGAAGTACAACCAGCCTTTCTACCTGTATATGTCCCAATACGCCATCCACGTCCCCTTGGA
CAAGGACAAACGTTTCTACGACAAATACAAGAAAAAAGGCATGACCGACCATGAAGCCGCATACGCCACACTGATCGAAG
GCATGGACAAGAGTCTGGGCGATCTGATGGACTGGCTGGAAAAAAGCGGAGAAGCCGACAACACTATTATTATCTTCATG
AGCGACAACGGAGGACTTGCCGCCGAATCGTATTGGCGTGACGGCAAACTGCACACCCAGAATCATCCTCTCAACAGTGG
TAAAGGCTCCACCTATGAAGGCGGCATCCGTGAACCGATGATCGTCAGCTGGCCCGGTGTCGTAGCCCCTGGCAGCAAAT
GCAATGATTACCTGCTGATAGAAGACTTCTATCCTACTATCCTCGAAATGGCGGGCATCAAAAAATACAAGACAGTTCAG
CCTATCGACGGCATCAGCTTCATGCCTTTACTGAAACAGACCAGGAATCCTTCCAAAGGACGCAGCCTCTTCTGGAATAT
GCCCAACAACTGGGGAAACGACGGTCCGGGAATCAACTTTAACTGTGCCGTACGCAAGGGTGACTGGAAATTAATCTATT
ACTATGGTACAGGTAAAAAAGAACTATTCAATATCCCCGATGATATAGGCGAAAGTAATGATCTCAGCGCACAACATCCG
GATATTGTGAAACGGCTTTCTAAAGAATTAGGAACCTATTTGAGAAAAGTTGATGCCCAACGTCCTACAGTCAAAGCTAC
GGGTAAACCTTGTCCTTGGCCGGACGAAATTAAGTAA

Upstream 100 bases:

>100_bases
GAATATGGGCAGACTCCCACGGGAAACAGGAATTACGGAGCATACCGATCAAAAAGGCCGGCAGAATTGAAATAATGAAA
TAACACTAAATAATTAATCC

Downstream 100 bases:

>100_bases
TTATTCACCTGTTTAGTCGGGAATTACATTAATTGTATGAAGGTGAATTCTAAGTCCTCTCCAAACAATATCTATAAAAT
CTTACCCAAGTTTACGAACA

Product: putative secreted sulfatase ydeN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MNKKILFPLALVPLAATGLQTQKSAQTQRVDKRPNIILFMVDDMGWQDTSLPFWTQKTDYNKLYETPNMERLAKQGMMFT
QAYASSISSPTRCSLITGTNAARHRVTNWTLQKNTKTDRKDKVLDVPDWNYNGVSQVPGTNNTFVGTSFVQLLKDSGYHT
IHCGKAHFGAIDTPGEDPHHWGFEVNIAGHAAGGLASYLGEENYGHNKDGKPISLMAVPGLEKYWGTETFVTEALTLEAI
KALNKAKKYNQPFYLYMSQYAIHVPLDKDKRFYDKYKKKGMTDHEAAYATLIEGMDKSLGDLMDWLEKSGEADNTIIIFM
SDNGGLAAESYWRDGKLHTQNHPLNSGKGSTYEGGIREPMIVSWPGVVAPGSKCNDYLLIEDFYPTILEMAGIKKYKTVQ
PIDGISFMPLLKQTRNPSKGRSLFWNMPNNWGNDGPGINFNCAVRKGDWKLIYYYGTGKKELFNIPDDIGESNDLSAQHP
DIVKRLSKELGTYLRKVDAQRPTVKATGKPCPWPDEIK

Sequences:

>Translated_518_residues
MNKKILFPLALVPLAATGLQTQKSAQTQRVDKRPNIILFMVDDMGWQDTSLPFWTQKTDYNKLYETPNMERLAKQGMMFT
QAYASSISSPTRCSLITGTNAARHRVTNWTLQKNTKTDRKDKVLDVPDWNYNGVSQVPGTNNTFVGTSFVQLLKDSGYHT
IHCGKAHFGAIDTPGEDPHHWGFEVNIAGHAAGGLASYLGEENYGHNKDGKPISLMAVPGLEKYWGTETFVTEALTLEAI
KALNKAKKYNQPFYLYMSQYAIHVPLDKDKRFYDKYKKKGMTDHEAAYATLIEGMDKSLGDLMDWLEKSGEADNTIIIFM
SDNGGLAAESYWRDGKLHTQNHPLNSGKGSTYEGGIREPMIVSWPGVVAPGSKCNDYLLIEDFYPTILEMAGIKKYKTVQ
PIDGISFMPLLKQTRNPSKGRSLFWNMPNNWGNDGPGINFNCAVRKGDWKLIYYYGTGKKELFNIPDDIGESNDLSAQHP
DIVKRLSKELGTYLRKVDAQRPTVKATGKPCPWPDEIK
>Mature_518_residues
MNKKILFPLALVPLAATGLQTQKSAQTQRVDKRPNIILFMVDDMGWQDTSLPFWTQKTDYNKLYETPNMERLAKQGMMFT
QAYASSISSPTRCSLITGTNAARHRVTNWTLQKNTKTDRKDKVLDVPDWNYNGVSQVPGTNNTFVGTSFVQLLKDSGYHT
IHCGKAHFGAIDTPGEDPHHWGFEVNIAGHAAGGLASYLGEENYGHNKDGKPISLMAVPGLEKYWGTETFVTEALTLEAI
KALNKAKKYNQPFYLYMSQYAIHVPLDKDKRFYDKYKKKGMTDHEAAYATLIEGMDKSLGDLMDWLEKSGEADNTIIIFM
SDNGGLAAESYWRDGKLHTQNHPLNSGKGSTYEGGIREPMIVSWPGVVAPGSKCNDYLLIEDFYPTILEMAGIKKYKTVQ
PIDGISFMPLLKQTRNPSKGRSLFWNMPNNWGNDGPGINFNCAVRKGDWKLIYYYGTGKKELFNIPDDIGESNDLSAQHP
DIVKRLSKELGTYLRKVDAQRPTVKATGKPCPWPDEIK

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI4503899, Length=458, Percent_Identity=26.8558951965066, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI38569405, Length=553, Percent_Identity=25.1356238698011, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI146229331, Length=481, Percent_Identity=24.948024948025, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI146229329, Length=481, Percent_Identity=24.948024948025, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI6005990, Length=481, Percent_Identity=24.948024948025, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI146229324, Length=481, Percent_Identity=24.948024948025, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI59797060, Length=502, Percent_Identity=24.5019920318725, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI53831991, Length=437, Percent_Identity=26.0869565217391, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI109389362, Length=505, Percent_Identity=23.1683168316832, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI38569407, Length=425, Percent_Identity=25.1764705882353, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI146229327, Length=251, Percent_Identity=27.4900398406374, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI39930577, Length=226, Percent_Identity=27.4336283185841, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI71852584, Length=199, Percent_Identity=29.1457286432161, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI58743319, Length=201, Percent_Identity=30.3482587064677, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI157266309, Length=204, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081924, Length=546, Percent_Identity=26.1904761904762, Blast_Score=144, Evalue=2e-35,
Organism=Escherichia coli, GI1790233, Length=437, Percent_Identity=26.0869565217391, Blast_Score=119, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI115533416, Length=485, Percent_Identity=24.9484536082474, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI115533418, Length=473, Percent_Identity=24.9471458773784, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24666109, Length=493, Percent_Identity=25.1521298174442, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI281366397, Length=394, Percent_Identity=25.8883248730964, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI281366395, Length=394, Percent_Identity=25.8883248730964, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24666163, Length=394, Percent_Identity=25.8883248730964, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI281363223, Length=450, Percent_Identity=23.7777777777778, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24666175, Length=403, Percent_Identity=25.5583126550869, Blast_Score=100, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 58182; Mature: 58182

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS00523 SULFATASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKILFPLALVPLAATGLQTQKSAQTQRVDKRPNIILFMVDDMGWQDTSLPFWTQKTDY
CCCEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCCCC
NKLYETPNMERLAKQGMMFTQAYASSISSPTRCSLITGTNAARHRVTNWTLQKNTKTDRK
HHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCHHHHEEEEEEEECCCCCCCC
DKVLDVPDWNYNGVSQVPGTNNTFVGTSFVQLLKDSGYHTIHCGKAHFGAIDTPGEDPHH
CCEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
WGFEVNIAGHAAGGLASYLGEENYGHNKDGKPISLMAVPGLEKYWGTETFVTEALTLEAI
CCEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHH
KALNKAKKYNQPFYLYMSQYAIHVPLDKDKRFYDKYKKKGMTDHEAAYATLIEGMDKSLG
HHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DLMDWLEKSGEADNTIIIFMSDNGGLAAESYWRDGKLHTQNHPLNSGKGSTYEGGIREPM
HHHHHHHHCCCCCCEEEEEECCCCCEEHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCE
IVSWPGVVAPGSKCNDYLLIEDFYPTILEMAGIKKYKTVQPIDGISFMPLLKQTRNPSKG
EEECCCEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
RSLFWNMPNNWGNDGPGINFNCAVRKGDWKLIYYYGTGKKELFNIPDDIGESNDLSAQHP
CEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCHHCCCCCHHCCCCCCCCCCCH
DIVKRLSKELGTYLRKVDAQRPTVKATGKPCPWPDEIK
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNKKILFPLALVPLAATGLQTQKSAQTQRVDKRPNIILFMVDDMGWQDTSLPFWTQKTDY
CCCEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCCCC
NKLYETPNMERLAKQGMMFTQAYASSISSPTRCSLITGTNAARHRVTNWTLQKNTKTDRK
HHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCHHHHEEEEEEEECCCCCCCC
DKVLDVPDWNYNGVSQVPGTNNTFVGTSFVQLLKDSGYHTIHCGKAHFGAIDTPGEDPHH
CCEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
WGFEVNIAGHAAGGLASYLGEENYGHNKDGKPISLMAVPGLEKYWGTETFVTEALTLEAI
CCEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHH
KALNKAKKYNQPFYLYMSQYAIHVPLDKDKRFYDKYKKKGMTDHEAAYATLIEGMDKSLG
HHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DLMDWLEKSGEADNTIIIFMSDNGGLAAESYWRDGKLHTQNHPLNSGKGSTYEGGIREPM
HHHHHHHHCCCCCCEEEEEECCCCCEEHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCE
IVSWPGVVAPGSKCNDYLLIEDFYPTILEMAGIKKYKTVQPIDGISFMPLLKQTRNPSKG
EEECCCEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
RSLFWNMPNNWGNDGPGINFNCAVRKGDWKLIYYYGTGKKELFNIPDDIGESNDLSAQHP
CEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCHHCCCCCHHCCCCCCCCCCCH
DIVKRLSKELGTYLRKVDAQRPTVKATGKPCPWPDEIK
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]