| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349201
Identifier: 29349201
GI number: 29349201
Start: 4928333
End: 4929226
Strand: Reverse
Name: 29349201
Synonym: BT_3793
Alternate gene names: NA
Gene position: 4929226-4928333 (Counterclockwise)
Preceding gene: 29349204
Following gene: 29349193
Centisome position: 78.74
GC content: 29.42
Gene sequence:
>894_bases ATGAAAACTTTAAATTACAAATTATTATTACTATTACTATTTATTAGTTCTGTAATTTATTCTTGTTCAAATGAGGATTC ATTAATTCCATCCCCACCTCCACCCATTGAAAATAATGTAATTACTCGTTCTAACGGAGTTGTTTTAGACATGCCATATA TTTCGCGCCCTGATTTAGATAACACTAGTCATAAAGATACAACTGATATGTGGATATTATATATTAGAACTGACAGATAT AATGAAAACGGAGAATATGATTATGGACATAAAGGACAATATATACAACTTCAATATTGTAAAGTGAATTCTTTCTATGA TGGAGATTGGAAAGATGCTGTAATTCAAATGGAGAATCCAATATATTTGAAGAAAAGTTATTATCCATTTGGAGAAATAT ATTTTAGAGCAAGAACTATGGATAAAGAGGAGTTAGCTAAAATTCCTGGATCCAGACAATATGAATATTCATACGAACTA TCTCCATGGTCATATTCACTATATGCATTTAACAATATCTATAATAGCGATGGGATTTCGTTAACAAAAAACAATATAAT AGTAGAACTCAATTTCATTTTTAACGCATCCTACACAGGTTACTTATGGGAGAAAGATTTATCCAATTTTGCAGCTTCTA TAAAATATGGAGATAAAAATTTAACTTATACAGTAAAGGATAAATACTATAAAAAATCAGGCTATAGAGAAACATATACT ATTTCAATGGATAAAGCCTATATTAATTATCATGGGTGTAGTATATCAGTTACCAACCGTACTCCAGGAGGGTATTATAT ATCCTTTGACCCTATGTTATTCACTATACCCACTTGTACCCCAAATGAAATAACTCCACCATTTTCATTTGATATAAATG TTAATCTACGGTAA
Upstream 100 bases:
>100_bases AAGCATTCATGCCATCAAACATTGAATTTTAGCATAAGTTCTAGTATTAATATACTACCTTTGAGAATAATCAATATATT AACCTTAAAAAGTTAAAGCC
Downstream 100 bases:
>100_bases ATAAGCACACTACAAAAAAGCCATCCCTACTTTGTCTATTCCGGGGATGGCTTTTTTATGTTCATATGTTCCCTGAACGG GAATCGTTCAACTATCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKTLNYKLLLLLLFISSVIYSCSNEDSLIPSPPPPIENNVITRSNGVVLDMPYISRPDLDNTSHKDTTDMWILYIRTDRY NENGEYDYGHKGQYIQLQYCKVNSFYDGDWKDAVIQMENPIYLKKSYYPFGEIYFRARTMDKEELAKIPGSRQYEYSYEL SPWSYSLYAFNNIYNSDGISLTKNNIIVELNFIFNASYTGYLWEKDLSNFAASIKYGDKNLTYTVKDKYYKKSGYRETYT ISMDKAYINYHGCSISVTNRTPGGYYISFDPMLFTIPTCTPNEITPPFSFDINVNLR
Sequences:
>Translated_297_residues MKTLNYKLLLLLLFISSVIYSCSNEDSLIPSPPPPIENNVITRSNGVVLDMPYISRPDLDNTSHKDTTDMWILYIRTDRY NENGEYDYGHKGQYIQLQYCKVNSFYDGDWKDAVIQMENPIYLKKSYYPFGEIYFRARTMDKEELAKIPGSRQYEYSYEL SPWSYSLYAFNNIYNSDGISLTKNNIIVELNFIFNASYTGYLWEKDLSNFAASIKYGDKNLTYTVKDKYYKKSGYRETYT ISMDKAYINYHGCSISVTNRTPGGYYISFDPMLFTIPTCTPNEITPPFSFDINVNLR >Mature_297_residues MKTLNYKLLLLLLFISSVIYSCSNEDSLIPSPPPPIENNVITRSNGVVLDMPYISRPDLDNTSHKDTTDMWILYIRTDRY NENGEYDYGHKGQYIQLQYCKVNSFYDGDWKDAVIQMENPIYLKKSYYPFGEIYFRARTMDKEELAKIPGSRQYEYSYEL SPWSYSLYAFNNIYNSDGISLTKNNIIVELNFIFNASYTGYLWEKDLSNFAASIKYGDKNLTYTVKDKYYKKSGYRETYT ISMDKAYINYHGCSISVTNRTPGGYYISFDPMLFTIPTCTPNEITPPFSFDINVNLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34690; Mature: 34690
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLNYKLLLLLLFISSVIYSCSNEDSLIPSPPPPIENNVITRSNGVVLDMPYISRPDLD CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCC NTSHKDTTDMWILYIRTDRYNENGEYDYGHKGQYIQLQYCKVNSFYDGDWKDAVIQMENP CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEECCCCCEEEEEECCC IYLKKSYYPFGEIYFRARTMDKEELAKIPGSRQYEYSYELSPWSYSLYAFNNIYNSDGIS EEEEECCCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEEECCCEEEEEEEECEECCCCCE LTKNNIIVELNFIFNASYTGYLWEKDLSNFAASIKYGDKNLTYTVKDKYYKKSGYRETYT EECCCEEEEEEEEEECCEEEEEEHHHHHHHEEEEEECCCCEEEEECCCEECCCCCCEEEE ISMDKAYINYHGCSISVTNRTPGGYYISFDPMLFTIPTCTPNEITPPFSFDINVNLR EEEEEEEEEEECEEEEECCCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKTLNYKLLLLLLFISSVIYSCSNEDSLIPSPPPPIENNVITRSNGVVLDMPYISRPDLD CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCC NTSHKDTTDMWILYIRTDRYNENGEYDYGHKGQYIQLQYCKVNSFYDGDWKDAVIQMENP CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEECCCCCEEEEEECCC IYLKKSYYPFGEIYFRARTMDKEELAKIPGSRQYEYSYELSPWSYSLYAFNNIYNSDGIS EEEEECCCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEEECCCEEEEEEEECEECCCCCE LTKNNIIVELNFIFNASYTGYLWEKDLSNFAASIKYGDKNLTYTVKDKYYKKSGYRETYT EECCCEEEEEEEEEECCEEEEEEHHHHHHHEEEEEECCCCEEEEECCCEECCCCCCEEEE ISMDKAYINYHGCSISVTNRTPGGYYISFDPMLFTIPTCTPNEITPPFSFDINVNLR EEEEEEEEEEECEEEEECCCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA