| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349185
Identifier: 29349185
GI number: 29349185
Start: 4901536
End: 4902336
Strand: Reverse
Name: 29349185
Synonym: BT_3777
Alternate gene names: NA
Gene position: 4902336-4901536 (Counterclockwise)
Preceding gene: 29349186
Following gene: 29349184
Centisome position: 78.31
GC content: 33.33
Gene sequence:
>801_bases ATGAAAAAAGTAGCAATTTTAATTATATTAATAATGGCAAGCGGACTATCTATGTATGGCCAAAACAGCTACAAAGTCAC TTCTTTAGTGAAGCTATCGGATATAAAAGAAAAGAACTTGCAACGTGTATTCTATGTTTTTTCAAAAAATGAGTTCCTAA AGCTACCCATCAATTATGATATTTCATTCTTTGTTTACCAAGACAACAACAGTATCTCTCGTGATGATTTTGAACATACG AGAGCAGTAACTCAAGGTACATCTTATAGAATAAGCAATTCTCCATTCTATGCTAATCTTGACAAAAGAGACAAGAGACC TCCCATTGAAACAGTTCTTTCTCTCATTGAAGATACTAATGGAAAATATATCATGGGAATAGTCAGAACTTGGTCAGCTC TTCACGATATGGATAAACATTGGTTAGTTACATTCAATTTTGCAGGAGCAATCATTGACTACATTCCCATTTGTGAATGG CCTGGAACATGCAGCAAAGCTAGAACCATGGAAGCACAAATCAATAAAGATTTTACGGTGAATGTTCAACAGTTGAACTT TCCTGAAAATAATTACATCATTCAGTTCGATAGTATAAAAAGAAATTTTATACACCTAGATAACCTGAAAGGGCAACGTA TAGATACTAAATATCAGATAATGCCGGATGGAAAGTTTAAAAAACTGGAAGAGGCATATTATCAACCGCAAATCTACACT CCGGACATGTTGAAGAGCAATGAAACCCTCATTCGATATAGAAGAGAAAATATTAAAGAAAAGAAAATATTTCAACAATA A
Upstream 100 bases:
>100_bases ATACAACATCTTTATAATATAAAAATGTATAACCTAGAACGAAACGATAGAGTCCACTTTTACCGTGGACTCTATCATCA TCTATAAATAATAATCAACC
Downstream 100 bases:
>100_bases AGACTATGAAAAACAGTTTAAGAATCCCACGAATTATCCACCAAACATGGAAAACAAAAGATGTACCTTCTCCTCTTGAC CAACTGCCACAAACATGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKKVAILIILIMASGLSMYGQNSYKVTSLVKLSDIKEKNLQRVFYVFSKNEFLKLPINYDISFFVYQDNNSISRDDFEHT RAVTQGTSYRISNSPFYANLDKRDKRPPIETVLSLIEDTNGKYIMGIVRTWSALHDMDKHWLVTFNFAGAIIDYIPICEW PGTCSKARTMEAQINKDFTVNVQQLNFPENNYIIQFDSIKRNFIHLDNLKGQRIDTKYQIMPDGKFKKLEEAYYQPQIYT PDMLKSNETLIRYRRENIKEKKIFQQ
Sequences:
>Translated_266_residues MKKVAILIILIMASGLSMYGQNSYKVTSLVKLSDIKEKNLQRVFYVFSKNEFLKLPINYDISFFVYQDNNSISRDDFEHT RAVTQGTSYRISNSPFYANLDKRDKRPPIETVLSLIEDTNGKYIMGIVRTWSALHDMDKHWLVTFNFAGAIIDYIPICEW PGTCSKARTMEAQINKDFTVNVQQLNFPENNYIIQFDSIKRNFIHLDNLKGQRIDTKYQIMPDGKFKKLEEAYYQPQIYT PDMLKSNETLIRYRRENIKEKKIFQQ >Mature_266_residues MKKVAILIILIMASGLSMYGQNSYKVTSLVKLSDIKEKNLQRVFYVFSKNEFLKLPINYDISFFVYQDNNSISRDDFEHT RAVTQGTSYRISNSPFYANLDKRDKRPPIETVLSLIEDTNGKYIMGIVRTWSALHDMDKHWLVTFNFAGAIIDYIPICEW PGTCSKARTMEAQINKDFTVNVQQLNFPENNYIIQFDSIKRNFIHLDNLKGQRIDTKYQIMPDGKFKKLEEAYYQPQIYT PDMLKSNETLIRYRRENIKEKKIFQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31339; Mature: 31339
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAILIILIMASGLSMYGQNSYKVTSLVKLSDIKEKNLQRVFYVFSKNEFLKLPINYD CCHHHHHHHHHHHCCHHHCCCCCEEEEEEEEHHHHHHHCCEEEEEEEECCCEEEEEECCC ISFFVYQDNNSISRDDFEHTRAVTQGTSYRISNSPFYANLDKRDKRPPIETVLSLIEDTN EEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHHCCC GKYIMGIVRTWSALHDMDKHWLVTFNFAGAIIDYIPICEWPGTCSKARTMEAQINKDFTV CCEEEHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEE NVQQLNFPENNYIIQFDSIKRNFIHLDNLKGQRIDTKYQIMPDGKFKKLEEAYYQPQIYT EEEEECCCCCCEEEEEECCCCCEEEEECCCCCEECCEEEEECCCCHHHHHHHHCCCCCCC PDMLKSNETLIRYRRENIKEKKIFQQ HHHHCCCHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure MKKVAILIILIMASGLSMYGQNSYKVTSLVKLSDIKEKNLQRVFYVFSKNEFLKLPINYD CCHHHHHHHHHHHCCHHHCCCCCEEEEEEEEHHHHHHHCCEEEEEEEECCCEEEEEECCC ISFFVYQDNNSISRDDFEHTRAVTQGTSYRISNSPFYANLDKRDKRPPIETVLSLIEDTN EEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHHCCC GKYIMGIVRTWSALHDMDKHWLVTFNFAGAIIDYIPICEWPGTCSKARTMEAQINKDFTV CCEEEHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEE NVQQLNFPENNYIIQFDSIKRNFIHLDNLKGQRIDTKYQIMPDGKFKKLEEAYYQPQIYT EEEEECCCCCCEEEEEECCCCCEEEEECCCCCEECCEEEEECCCCHHHHHHHHCCCCCCC PDMLKSNETLIRYRRENIKEKKIFQQ HHHHCCCHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA