Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349186

Identifier: 29349186

GI number: 29349186

Start: 4902420

End: 4903364

Strand: Reverse

Name: 29349186

Synonym: BT_3778

Alternate gene names: NA

Gene position: 4903364-4902420 (Counterclockwise)

Preceding gene: 29349187

Following gene: 29349185

Centisome position: 78.32

GC content: 40.95

Gene sequence:

>945_bases
ATGGAAAAGAAAAGTAAAGCGGAGAAATTAAAATTAAGAGGGATCAACCAAACCATATTGATCTCCAGTTACAATTCAGG
GGCAGGTACAGGTCCCAATGATTGCATGACAGAAGAAGTTTATCAACGGCTTAATGCCCAAGGAGCCTTAGATACCACCG
TCTATGTATGTGGCATTGGATGGATGACACCGGACGTAACTATCTACGGTAGCGGATCAGGTTTCGGTTCCGGTAGTGGT
TCCGGCAGCGGTAGTGGTTCTGGCGAGTATTGGGGAAGCGGACACTGGGGAAGTGGAGATTGGGGAAGTGGTAGCGGGTG
GACTGGTGGTGGAACTAGTGGTGGAGGAACTAGCGGTGGAGGAACTAGCGGTGATGGTCCGAAACCTGGAGGTGGAGACA
AACCCGTTCCCAAAGATCCAATAGAATTAATGGACAAAAGTAGGTTTGTTGGTTGGAGAGAAGGAGCTAATTGCTTAAGT
CTTTGCAAAGAAACACTAAAAAAATATGGATTATCCAATTACGGAAGTAGCTTAAATGTTTTTAAGCTAGTTGATTCTGC
AAATGGATTATTAACAAACTGGGGAAATGATCCAGCTCAAAACTACAAAAATGCAATTGAATGTATCGATAAACATCTCA
ATGCAAAACGAGTTATCATAGTAGGAGTTGATTATGATCTCGATTTAAATCCAAACATCGACGGTACAGACCATTTTATT
GTAGTTACAGGAAGAGGATATGATACTTCACGACAACAGTATTACTATACATTTATGGATAATGCAACTTCCAACTCTGA
TGATGGATGTAGCAACATTAATCGCCTTTACTACAAAACTGAAAATTTAAAGCTAGAGGGAAGCACAAAGGTTGCTAACA
GATATTATACTGTAACTCAAGTAAGACCCAACGACGGTGGGAAATATGATACAACATCTTTATAA

Upstream 100 bases:

>100_bases
TGATATGTATCAATTGATTTCAACTTAAACAAGTGTATAAACTTATCTATGCATCCAAAAGAAACGACTTTATTTATAAA
CACTAAAATTATCATGTATT

Downstream 100 bases:

>100_bases
TATAAAAATGTATAACCTAGAACGAAACGATAGAGTCCACTTTTACCGTGGACTCTATCATCATCTATAAATAATAATCA
ACCATGAAAAAAGTAGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MEKKSKAEKLKLRGINQTILISSYNSGAGTGPNDCMTEEVYQRLNAQGALDTTVYVCGIGWMTPDVTIYGSGSGFGSGSG
SGSGSGSGEYWGSGHWGSGDWGSGSGWTGGGTSGGGTSGGGTSGDGPKPGGGDKPVPKDPIELMDKSRFVGWREGANCLS
LCKETLKKYGLSNYGSSLNVFKLVDSANGLLTNWGNDPAQNYKNAIECIDKHLNAKRVIIVGVDYDLDLNPNIDGTDHFI
VVTGRGYDTSRQQYYYTFMDNATSNSDDGCSNINRLYYKTENLKLEGSTKVANRYYTVTQVRPNDGGKYDTTSL

Sequences:

>Translated_314_residues
MEKKSKAEKLKLRGINQTILISSYNSGAGTGPNDCMTEEVYQRLNAQGALDTTVYVCGIGWMTPDVTIYGSGSGFGSGSG
SGSGSGSGEYWGSGHWGSGDWGSGSGWTGGGTSGGGTSGGGTSGDGPKPGGGDKPVPKDPIELMDKSRFVGWREGANCLS
LCKETLKKYGLSNYGSSLNVFKLVDSANGLLTNWGNDPAQNYKNAIECIDKHLNAKRVIIVGVDYDLDLNPNIDGTDHFI
VVTGRGYDTSRQQYYYTFMDNATSNSDDGCSNINRLYYKTENLKLEGSTKVANRYYTVTQVRPNDGGKYDTTSL
>Mature_314_residues
MEKKSKAEKLKLRGINQTILISSYNSGAGTGPNDCMTEEVYQRLNAQGALDTTVYVCGIGWMTPDVTIYGSGSGFGSGSG
SGSGSGSGEYWGSGHWGSGDWGSGSGWTGGGTSGGGTSGGGTSGDGPKPGGGDKPVPKDPIELMDKSRFVGWREGANCLS
LCKETLKKYGLSNYGSSLNVFKLVDSANGLLTNWGNDPAQNYKNAIECIDKHLNAKRVIIVGVDYDLDLNPNIDGTDHFI
VVTGRGYDTSRQQYYYTFMDNATSNSDDGCSNINRLYYKTENLKLEGSTKVANRYYTVTQVRPNDGGKYDTTSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33445; Mature: 33445

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKSKAEKLKLRGINQTILISSYNSGAGTGPNDCMTEEVYQRLNAQGALDTTVYVCGIG
CCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEC
WMTPDVTIYGSGSGFGSGSGSGSGSGSGEYWGSGHWGSGDWGSGSGWTGGGTSGGGTSGG
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTSGDGPKPGGGDKPVPKDPIELMDKSRFVGWREGANCLSLCKETLKKYGLSNYGSSLNV
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
FKLVDSANGLLTNWGNDPAQNYKNAIECIDKHLNAKRVIIVGVDYDLDLNPNIDGTDHFI
EEEEECCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEE
VVTGRGYDTSRQQYYYTFMDNATSNSDDGCSNINRLYYKTENLKLEGSTKVANRYYTVTQ
EEECCCCCCCCCEEEEEEECCCCCCCCCCHHHCCEEEEEECCEEECCCCEECCEEEEEEE
VRPNDGGKYDTTSL
EECCCCCCCCCCCC
>Mature Secondary Structure
MEKKSKAEKLKLRGINQTILISSYNSGAGTGPNDCMTEEVYQRLNAQGALDTTVYVCGIG
CCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEC
WMTPDVTIYGSGSGFGSGSGSGSGSGSGEYWGSGHWGSGDWGSGSGWTGGGTSGGGTSGG
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTSGDGPKPGGGDKPVPKDPIELMDKSRFVGWREGANCLSLCKETLKKYGLSNYGSSLNV
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
FKLVDSANGLLTNWGNDPAQNYKNAIECIDKHLNAKRVIIVGVDYDLDLNPNIDGTDHFI
EEEEECCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEE
VVTGRGYDTSRQQYYYTFMDNATSNSDDGCSNINRLYYKTENLKLEGSTKVANRYYTVTQ
EEECCCCCCCCCEEEEEEECCCCCCCCCCHHHCCEEEEEECCEEECCCCEECCEEEEEEE
VRPNDGGKYDTTSL
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA