| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349184
Identifier: 29349184
GI number: 29349184
Start: 4900829
End: 4901530
Strand: Reverse
Name: 29349184
Synonym: BT_3776
Alternate gene names: NA
Gene position: 4901530-4900829 (Counterclockwise)
Preceding gene: 29349185
Following gene: 29349183
Centisome position: 78.29
GC content: 38.6
Gene sequence:
>702_bases ATGAAAAACAGTTTAAGAATCCCACGAATTATCCACCAAACATGGAAAACAAAAGATGTACCTTCTCCTCTTGACCAACT GCCACAAACATGGAAAGAATATCTCCCGAATTGGGAATATATCCTATGGACAGATGAAATGAACAGGGAATTTGTCTGCA AACATTTCCCTGATTTCCTGGAGAAGTATGATACATATCCTTGTAACATACAAAGAGCAGACGCTATACGCTATCTTCTC TTGAAAGTTTATGGAGGATTGTACGTAGACATGGATTTCGAGTGCCTCGAAAATATTGAGTTCTTACTAGAAGGATCGGA TTTTATCGTAGGTAAGGAACCCGACTGGCATGCTAAACGCTTTGGTTTTGAATATATCATTTGCAACGCTTTCATGGCGT CAACACCCGATAATGATTTTATCAACTTTGTATGCCAAAGGTTAATCAATCATTCCGGTGGGAAAGTTGTTAATAACGGA TTTGATATACTGGATTCCACAGGCCCTTTCTTGCTAACGCATGCATTCAACGCATTTCCACATAAAGAAGACATACGTAT CCTCGAATCAAAGACAATATATCCTATCGGACAATGGGAGGTAGAGAAAATAAAAAACAACCAGATTCCTAAAGAAATGG AAGAGCGTATCAATCAGGCTCATGCCATACACTATTTCTTTGGTACCTGGTTTGGTAAGTAA
Upstream 100 bases:
>100_bases CGCAAATCTACACTCCGGACATGTTGAAGAGCAATGAAACCCTCATTCGATATAGAAGAGAAAATATTAAAGAAAAGAAA ATATTTCAACAATAAAGACT
Downstream 100 bases:
>100_bases CCTTTAAAAATAAAATAAATAATGATCCCAAAGAATATACACCTTATCTTTCTACGCAAAGATGAACCGTTCCCCGAACT ATTCGAGAAATGCAAACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Transferase Family; PE-PGRS Family Protein; Surface
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKNSLRIPRIIHQTWKTKDVPSPLDQLPQTWKEYLPNWEYILWTDEMNREFVCKHFPDFLEKYDTYPCNIQRADAIRYLL LKVYGGLYVDMDFECLENIEFLLEGSDFIVGKEPDWHAKRFGFEYIICNAFMASTPDNDFINFVCQRLINHSGGKVVNNG FDILDSTGPFLLTHAFNAFPHKEDIRILESKTIYPIGQWEVEKIKNNQIPKEMEERINQAHAIHYFFGTWFGK
Sequences:
>Translated_233_residues MKNSLRIPRIIHQTWKTKDVPSPLDQLPQTWKEYLPNWEYILWTDEMNREFVCKHFPDFLEKYDTYPCNIQRADAIRYLL LKVYGGLYVDMDFECLENIEFLLEGSDFIVGKEPDWHAKRFGFEYIICNAFMASTPDNDFINFVCQRLINHSGGKVVNNG FDILDSTGPFLLTHAFNAFPHKEDIRILESKTIYPIGQWEVEKIKNNQIPKEMEERINQAHAIHYFFGTWFGK >Mature_233_residues MKNSLRIPRIIHQTWKTKDVPSPLDQLPQTWKEYLPNWEYILWTDEMNREFVCKHFPDFLEKYDTYPCNIQRADAIRYLL LKVYGGLYVDMDFECLENIEFLLEGSDFIVGKEPDWHAKRFGFEYIICNAFMASTPDNDFINFVCQRLINHSGGKVVNNG FDILDSTGPFLLTHAFNAFPHKEDIRILESKTIYPIGQWEVEKIKNNQIPKEMEERINQAHAIHYFFGTWFGK
Specific function: Unknown
COG id: COG3774
COG function: function code M; Mannosyltransferase OCH1 and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6325200, Length=234, Percent_Identity=30.3418803418803, Blast_Score=105, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6319637, Length=167, Percent_Identity=34.7305389221557, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27628; Mature: 27628
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSLRIPRIIHQTWKTKDVPSPLDQLPQTWKEYLPNWEYILWTDEMNREFVCKHFPDFL CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH EKYDTYPCNIQRADAIRYLLLKVYGGLYVDMDFECLENIEFLLEGSDFIVGKEPDWHAKR HHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHEECCCCEEECCCCCCHHHH FGFEYIICNAFMASTPDNDFINFVCQRLINHSGGKVVNNGFDILDSTGPFLLTHAFNAFP HCHHHHEEHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCHHHHHHHCCC HKEDIRILESKTIYPIGQWEVEKIKNNQIPKEMEERINQAHAIHYFFGTWFGK CHHHHEEECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNSLRIPRIIHQTWKTKDVPSPLDQLPQTWKEYLPNWEYILWTDEMNREFVCKHFPDFL CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH EKYDTYPCNIQRADAIRYLLLKVYGGLYVDMDFECLENIEFLLEGSDFIVGKEPDWHAKR HHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHEECCCCEEECCCCCCHHHH FGFEYIICNAFMASTPDNDFINFVCQRLINHSGGKVVNNGFDILDSTGPFLLTHAFNAFP HCHHHHEEHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCHHHHHHHCCC HKEDIRILESKTIYPIGQWEVEKIKNNQIPKEMEERINQAHAIHYFFGTWFGK CHHHHEEECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA