| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349003
Identifier: 29349003
GI number: 29349003
Start: 4653339
End: 4655354
Strand: Reverse
Name: 29349003
Synonym: BT_3595
Alternate gene names: NA
Gene position: 4655354-4653339 (Counterclockwise)
Preceding gene: 29349004
Following gene: 29349002
Centisome position: 74.36
GC content: 41.82
Gene sequence:
>2016_bases ATGATAACCGGTATTATTAGCATATTATGCTATTTACAATGTTTTGGAACTTTATCAGCCTCAGTGACTGCTAAAAATGA AAATGGAAACTTTGTATTAAAAAACAAGAATGTTGAATTAGTGTTTGCCAACGGAAAAGAATTCTTATTCAAGGAATTCC GCATGGATGGCATGAACATATTGCCTGTAGATGGAAGTACAACACATCCGTGGCAACTAATCTATCGGGGTCCCAACGGA GAGAACCCGACCTTAATGCCCCGATGGGGCGAATATAAAGGAGGCGAGATACAAAAAACTCAAGATGCCTCAACATTAAT ATTCACCTGGCAAATGGTTATAGATGCAGGACCGACGTGTCCGGTACGCATATTAGTCACATTAGGTAAAGATGCCGAAC TACCGGAATGGCGCATTGAAGCAGAAATGCCGGAAGGATGGGTGATTACAGAATCTGAATTTCCCCGTATTGCTGTAAAC AGACCGGAAGGAGCAAAAGGAATTCTTCCTGTCGGATTCGGGACCGAATACACAATCGGCAATGAAGGACAACTGCAATC ACGTTATCCTTCGTGTACAGGCACAATGCAATTAGTGCTGATGCATCATAAAGGAGGCACAGTCTACTTTGCCGCACAAG ACAAAGGGGGATCTGGCAAAGTATTCAGAATGAAAAGTGAAGGAAAAAGTCTTGTATTTATTCAGAATGTGACAACATCC TATGCCTGGACTCAAAACAAGAAGTTCTGCATTCCTTGGGAAACAGTGATGGGATTTACCCAAAAGGGATGGCAGGACGC TGCAGTACAATGGTATCGTCCATTTACTTTCGAAACACTGTGGGGTGCAAAAACTATTTCAGAACGTCCTATAGCAGAAT GGATCAAAAACGCTGATATGTGGCTACGGCCGGGAGAAGTAAATGCTGAAACAATGGAAGCAGTACGTAAAGCGATGAAA TACTATGGAAAAGGAGTCGGATTGCATTGGTATTATTGGCACAATCATCGTTTCGATACTAAATATCCGGAATACTTTCC CGAAAAAGCAGGATTCAAAGAAATGATTAAAGAAACACAGGAACTTGGAGGATTTATTACTCCATATATTAACGGTCGTC TATGGGATCCAGCAACAGACAGCTATAAAACGCTTAATGGTAAAGATGCCTCTTGTCGCAAAGCTGATGGTACATTATAT ACAGAAGTATATAGCTCAAAGGTATTAAATACTGTAACCTGCCCAGCTTCTTATATTTGGAGAGATGTGCTGAAAGGAGT CAACAAACAGATATTAACTGAACTAAAAACGAACGGTGTATATATGGATCAGATAGGTTGCGCCAACAGCGAACCCTGCT ATGCAACCAACCACGGACATGCACCTGGCGGTGGTGATTGGTGGCCTTTTGCCTACCGCAGTTTACTCACCGAAATGCGC ACAAATCTATACAAAGAGAACCAAGCCATGACAACAGAAGAAAATGCAGAGTGCTATATTGACCTGTTTGACATGATGTT AGTTGTCAATTCTCCGCACAACAGCTATACAAAAATGGTTCCGTTGTTCCCGCTCATTTATTCTGACCGTTGCATCTATA GCGGATACACCTACATCCCTTGGCGTATCACAGACGGTTCTTTGAATTTCATGAGTATGCGTAGTCTGTTATGGGGTTCT CAGTTAGGATGGGTAGAGCCCAGTCTGTTGATGCGCCCGGACGCTAAAAGGGAAGCTAAATTTCTGAAAAATCTGACAGA TTTCCGCCGTCAACAACATGATTTATTCTTGGGAGGCCGTTTTATACAGGAAATAATTCCAACTGGTGATAACCCAACGC AAGAGATACCCAACTATGAAATAACTTCGGTAGTATTAGCGGCAGAATGGGCTAGTGTATCAGGCGAACACGTATACCTT ATAGTAAATATGAGTGAACAAGAACACAAGGTTACACTGCCTAATAAAAAACAAATAACCGTCAAAGCACTTGATGCGAT CAGAATCAGCAAATAA
Upstream 100 bases:
>100_bases AAACCGCTCTTCCACAAGAGGAAGTAATAAAATTATTCAGAAAAAGCATCGAAATTATTAAATAGAAATTATTCATCCTA ATCTTTTGTATATGAGAAAT
Downstream 100 bases:
>100_bases ACAGTCTTTGTAATCAAACAATAAATAGTACAGTAAAATGAAACAGATTATATTTATAGCAATATTATTAACATGTGCCT TCGGAGCCTGCTCAAGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNILPVDGSTTHPWQLIYRGPNG ENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTCPVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVN RPEGAKGILPVGFGTEYTIGNEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADMWLRPGEVNAETMEAVRKAMK YYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLY TEVYSSKVLNTVTCPASYIWRDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIPWRITDGSLNFMSMRSLLWGS QLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGRFIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYL IVNMSEQEHKVTLPNKKQITVKALDAIRISK
Sequences:
>Translated_671_residues MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNILPVDGSTTHPWQLIYRGPNG ENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTCPVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVN RPEGAKGILPVGFGTEYTIGNEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADMWLRPGEVNAETMEAVRKAMK YYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLY TEVYSSKVLNTVTCPASYIWRDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIPWRITDGSLNFMSMRSLLWGS QLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGRFIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYL IVNMSEQEHKVTLPNKKQITVKALDAIRISK >Mature_671_residues MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNILPVDGSTTHPWQLIYRGPNG ENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTCPVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVN RPEGAKGILPVGFGTEYTIGNEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADMWLRPGEVNAETMEAVRKAMK YYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLY TEVYSSKVLNTVTCPASYIWRDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIPWRITDGSLNFMSMRSLLWGS QLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGRFIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYL IVNMSEQEHKVTLPNKKQITVKALDAIRISK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76443; Mature: 76443
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNI CHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECCCEEEEEECCHHHHHHHHCCCCCEE LPVDGSTTHPWQLIYRGPNGENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTC EECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEECCCCCEEEEEEEEEECCCCCC PVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVNRPEGAKGILPVGFGTEYTIG CEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCEEEECCCCEEEEC NEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS CCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCC YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADM EEEECCCEEEECHHHHHHHHHCCCCHHHHEEECCCEEEHHCCCCCCCCCHHHHHHCCCCC WLRPGEVNAETMEAVRKAMKYYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQ EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH ELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLYTEVYSSKVLNTVTCPASYIW HHCCEEEECCCCEECCCCCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHHEECCCHHHHH RDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR HHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIP HHHHHCCCCCCCCCCCEEEEEEEEEEHEEECCCCCHHHHHHHHHHHCCCCEEECCEEEEE WRITDGSLNFMSMRSLLWGSQLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGR EEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEECHH FIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYLIVNMSEQEHKVTLPNKKQIT HHHHHCCCCCCCHHHCCCCCCEEEEEEEHHHCCCCCEEEEEEECCCCCCEEECCCCCEEE VKALDAIRISK EEEECEEECCC >Mature Secondary Structure MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNI CHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECCCEEEEEECCHHHHHHHHCCCCCEE LPVDGSTTHPWQLIYRGPNGENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTC EECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEECCCCCEEEEEEEEEECCCCCC PVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVNRPEGAKGILPVGFGTEYTIG CEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCEEEECCCCEEEEC NEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS CCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCC YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADM EEEECCCEEEECHHHHHHHHHCCCCHHHHEEECCCEEEHHCCCCCCCCCHHHHHHCCCCC WLRPGEVNAETMEAVRKAMKYYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQ EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH ELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLYTEVYSSKVLNTVTCPASYIW HHCCEEEECCCCEECCCCCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHHEECCCHHHHH RDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR HHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIP HHHHHCCCCCCCCCCCEEEEEEEEEEHEEECCCCCHHHHHHHHHHHCCCCEEECCEEEEE WRITDGSLNFMSMRSLLWGSQLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGR EEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEECHH FIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYLIVNMSEQEHKVTLPNKKQIT HHHHHCCCCCCCHHHCCCCCCEEEEEEEHHHCCCCCEEEEEEECCCCCCEEECCCCCEEE VKALDAIRISK EEEECEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA