Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349003

Identifier: 29349003

GI number: 29349003

Start: 4653339

End: 4655354

Strand: Reverse

Name: 29349003

Synonym: BT_3595

Alternate gene names: NA

Gene position: 4655354-4653339 (Counterclockwise)

Preceding gene: 29349004

Following gene: 29349002

Centisome position: 74.36

GC content: 41.82

Gene sequence:

>2016_bases
ATGATAACCGGTATTATTAGCATATTATGCTATTTACAATGTTTTGGAACTTTATCAGCCTCAGTGACTGCTAAAAATGA
AAATGGAAACTTTGTATTAAAAAACAAGAATGTTGAATTAGTGTTTGCCAACGGAAAAGAATTCTTATTCAAGGAATTCC
GCATGGATGGCATGAACATATTGCCTGTAGATGGAAGTACAACACATCCGTGGCAACTAATCTATCGGGGTCCCAACGGA
GAGAACCCGACCTTAATGCCCCGATGGGGCGAATATAAAGGAGGCGAGATACAAAAAACTCAAGATGCCTCAACATTAAT
ATTCACCTGGCAAATGGTTATAGATGCAGGACCGACGTGTCCGGTACGCATATTAGTCACATTAGGTAAAGATGCCGAAC
TACCGGAATGGCGCATTGAAGCAGAAATGCCGGAAGGATGGGTGATTACAGAATCTGAATTTCCCCGTATTGCTGTAAAC
AGACCGGAAGGAGCAAAAGGAATTCTTCCTGTCGGATTCGGGACCGAATACACAATCGGCAATGAAGGACAACTGCAATC
ACGTTATCCTTCGTGTACAGGCACAATGCAATTAGTGCTGATGCATCATAAAGGAGGCACAGTCTACTTTGCCGCACAAG
ACAAAGGGGGATCTGGCAAAGTATTCAGAATGAAAAGTGAAGGAAAAAGTCTTGTATTTATTCAGAATGTGACAACATCC
TATGCCTGGACTCAAAACAAGAAGTTCTGCATTCCTTGGGAAACAGTGATGGGATTTACCCAAAAGGGATGGCAGGACGC
TGCAGTACAATGGTATCGTCCATTTACTTTCGAAACACTGTGGGGTGCAAAAACTATTTCAGAACGTCCTATAGCAGAAT
GGATCAAAAACGCTGATATGTGGCTACGGCCGGGAGAAGTAAATGCTGAAACAATGGAAGCAGTACGTAAAGCGATGAAA
TACTATGGAAAAGGAGTCGGATTGCATTGGTATTATTGGCACAATCATCGTTTCGATACTAAATATCCGGAATACTTTCC
CGAAAAAGCAGGATTCAAAGAAATGATTAAAGAAACACAGGAACTTGGAGGATTTATTACTCCATATATTAACGGTCGTC
TATGGGATCCAGCAACAGACAGCTATAAAACGCTTAATGGTAAAGATGCCTCTTGTCGCAAAGCTGATGGTACATTATAT
ACAGAAGTATATAGCTCAAAGGTATTAAATACTGTAACCTGCCCAGCTTCTTATATTTGGAGAGATGTGCTGAAAGGAGT
CAACAAACAGATATTAACTGAACTAAAAACGAACGGTGTATATATGGATCAGATAGGTTGCGCCAACAGCGAACCCTGCT
ATGCAACCAACCACGGACATGCACCTGGCGGTGGTGATTGGTGGCCTTTTGCCTACCGCAGTTTACTCACCGAAATGCGC
ACAAATCTATACAAAGAGAACCAAGCCATGACAACAGAAGAAAATGCAGAGTGCTATATTGACCTGTTTGACATGATGTT
AGTTGTCAATTCTCCGCACAACAGCTATACAAAAATGGTTCCGTTGTTCCCGCTCATTTATTCTGACCGTTGCATCTATA
GCGGATACACCTACATCCCTTGGCGTATCACAGACGGTTCTTTGAATTTCATGAGTATGCGTAGTCTGTTATGGGGTTCT
CAGTTAGGATGGGTAGAGCCCAGTCTGTTGATGCGCCCGGACGCTAAAAGGGAAGCTAAATTTCTGAAAAATCTGACAGA
TTTCCGCCGTCAACAACATGATTTATTCTTGGGAGGCCGTTTTATACAGGAAATAATTCCAACTGGTGATAACCCAACGC
AAGAGATACCCAACTATGAAATAACTTCGGTAGTATTAGCGGCAGAATGGGCTAGTGTATCAGGCGAACACGTATACCTT
ATAGTAAATATGAGTGAACAAGAACACAAGGTTACACTGCCTAATAAAAAACAAATAACCGTCAAAGCACTTGATGCGAT
CAGAATCAGCAAATAA

Upstream 100 bases:

>100_bases
AAACCGCTCTTCCACAAGAGGAAGTAATAAAATTATTCAGAAAAAGCATCGAAATTATTAAATAGAAATTATTCATCCTA
ATCTTTTGTATATGAGAAAT

Downstream 100 bases:

>100_bases
ACAGTCTTTGTAATCAAACAATAAATAGTACAGTAAAATGAAACAGATTATATTTATAGCAATATTATTAACATGTGCCT
TCGGAGCCTGCTCAAGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNILPVDGSTTHPWQLIYRGPNG
ENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTCPVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVN
RPEGAKGILPVGFGTEYTIGNEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS
YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADMWLRPGEVNAETMEAVRKAMK
YYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLY
TEVYSSKVLNTVTCPASYIWRDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR
TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIPWRITDGSLNFMSMRSLLWGS
QLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGRFIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYL
IVNMSEQEHKVTLPNKKQITVKALDAIRISK

Sequences:

>Translated_671_residues
MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNILPVDGSTTHPWQLIYRGPNG
ENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTCPVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVN
RPEGAKGILPVGFGTEYTIGNEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS
YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADMWLRPGEVNAETMEAVRKAMK
YYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLY
TEVYSSKVLNTVTCPASYIWRDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR
TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIPWRITDGSLNFMSMRSLLWGS
QLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGRFIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYL
IVNMSEQEHKVTLPNKKQITVKALDAIRISK
>Mature_671_residues
MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNILPVDGSTTHPWQLIYRGPNG
ENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTCPVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVN
RPEGAKGILPVGFGTEYTIGNEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS
YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADMWLRPGEVNAETMEAVRKAMK
YYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLY
TEVYSSKVLNTVTCPASYIWRDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR
TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIPWRITDGSLNFMSMRSLLWGS
QLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGRFIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYL
IVNMSEQEHKVTLPNKKQITVKALDAIRISK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76443; Mature: 76443

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNI
CHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECCCEEEEEECCHHHHHHHHCCCCCEE
LPVDGSTTHPWQLIYRGPNGENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTC
EECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEECCCCCEEEEEEEEEECCCCCC
PVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVNRPEGAKGILPVGFGTEYTIG
CEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCEEEECCCCEEEEC
NEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS
CCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCC
YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADM
EEEECCCEEEECHHHHHHHHHCCCCHHHHEEECCCEEEHHCCCCCCCCCHHHHHHCCCCC
WLRPGEVNAETMEAVRKAMKYYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQ
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
ELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLYTEVYSSKVLNTVTCPASYIW
HHCCEEEECCCCEECCCCCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHHEECCCHHHHH
RDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR
HHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIP
HHHHHCCCCCCCCCCCEEEEEEEEEEHEEECCCCCHHHHHHHHHHHCCCCEEECCEEEEE
WRITDGSLNFMSMRSLLWGSQLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGR
EEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEECHH
FIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYLIVNMSEQEHKVTLPNKKQIT
HHHHHCCCCCCCHHHCCCCCCEEEEEEEHHHCCCCCEEEEEEECCCCCCEEECCCCCEEE
VKALDAIRISK
EEEECEEECCC
>Mature Secondary Structure
MITGIISILCYLQCFGTLSASVTAKNENGNFVLKNKNVELVFANGKEFLFKEFRMDGMNI
CHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECCCEEEEEECCHHHHHHHHCCCCCEE
LPVDGSTTHPWQLIYRGPNGENPTLMPRWGEYKGGEIQKTQDASTLIFTWQMVIDAGPTC
EECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEECCCCCEEEEEEEEEECCCCCC
PVRILVTLGKDAELPEWRIEAEMPEGWVITESEFPRIAVNRPEGAKGILPVGFGTEYTIG
CEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCEEEECCCCEEEEC
NEGQLQSRYPSCTGTMQLVLMHHKGGTVYFAAQDKGGSGKVFRMKSEGKSLVFIQNVTTS
CCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCC
YAWTQNKKFCIPWETVMGFTQKGWQDAAVQWYRPFTFETLWGAKTISERPIAEWIKNADM
EEEECCCEEEECHHHHHHHHHCCCCHHHHEEECCCEEEHHCCCCCCCCCHHHHHHCCCCC
WLRPGEVNAETMEAVRKAMKYYGKGVGLHWYYWHNHRFDTKYPEYFPEKAGFKEMIKETQ
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
ELGGFITPYINGRLWDPATDSYKTLNGKDASCRKADGTLYTEVYSSKVLNTVTCPASYIW
HHCCEEEECCCCEECCCCCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHHEECCCHHHHH
RDVLKGVNKQILTELKTNGVYMDQIGCANSEPCYATNHGHAPGGGDWWPFAYRSLLTEMR
HHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
TNLYKENQAMTTEENAECYIDLFDMMLVVNSPHNSYTKMVPLFPLIYSDRCIYSGYTYIP
HHHHHCCCCCCCCCCCEEEEEEEEEEHEEECCCCCHHHHHHHHHHHCCCCEEECCEEEEE
WRITDGSLNFMSMRSLLWGSQLGWVEPSLLMRPDAKREAKFLKNLTDFRRQQHDLFLGGR
EEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEECHH
FIQEIIPTGDNPTQEIPNYEITSVVLAAEWASVSGEHVYLIVNMSEQEHKVTLPNKKQIT
HHHHHCCCCCCCHHHCCCCCCEEEEEEEHHHCCCCCEEEEEEECCCCCCEEECCCCCEEE
VKALDAIRISK
EEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA