| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349004
Identifier: 29349004
GI number: 29349004
Start: 4655390
End: 4657639
Strand: Reverse
Name: 29349004
Synonym: BT_3596
Alternate gene names: NA
Gene position: 4657639-4655390 (Counterclockwise)
Preceding gene: 29349005
Following gene: 29349003
Centisome position: 74.4
GC content: 39.11
Gene sequence:
>2250_bases ATGATGAAAAGAATATATTATACATATCCGGTTTTATTAGTCTGGCTTGTGTCGACATTGTTGCCACAATTTTGTATAGC TATGCCTAATGAACAGAAAGAAAACAATGATGTGGTCATAGAGAACGCGGAAATGCGTCTAATTATTAGCAATGACGGAA AAGCACGCAGCCTGATACACAAAGCTACGGGAGAGGAATGTCTGATAACAAATGCAGATGTACCTTTATGCGCTATTACC CAATACCGTCCTTACGATAATGAAAACTTCCTAATGTTTCCTGCAAAGCCACGCACCTTCCCAGCCAATAAAATTGAACG TAACGGAAATGAATTACGTATAGAATTTCAGGATACCTATGACATTGCCATCATAGAGTTAAATATCACAGATTATTATA TAGGTTTCACTCTGAAGCAAATTGATTATCGTATCGAAGATTTTGGGGTAAAACGCAAAACTGAAATAGATGAAATCTCA TTATTACAATTACCAGTACGTAAACGTGAGAACTTTGGTGAGTGGCTGAATGTATCATGGGATGAACAGACAGCCATATG CCTGCTAGGCACCCATCCGACCACCTATATCGATGCTTTTGCAAACAAGGAATATACTACGATGTATGCAGGACTTGATT TTCAAGTGAAACTTTTCAATTCCGGTGCAGCACTGATTACTACTTCAAAAGAAAAACTGCTAACCTGTATTGATAAAGTA GAACGTGACTATCATATGCCTTTAGGAGTAGAAAGTCGCCAACGTAAAGAATATCAGTACTCCTATTATGAGCTACGTGA TGTCACGACTAAAAATATAGATGAACATATTGCATATGCTCAAAAAGGTGGTTTCAAATCCATTGTCGTCTATTATGTTG ATTTCGCCAAAGCTTGCGGACATTATGAATGGAGAAAAGAATATCCGAATGGAATGAAAGATTTACAGGAAATCACTAAT AAAATCAAAGCAGCAGGCATGATACCCGGCATTCATATTCATTATTCCAAAGTAGCAGTGAATGACCCATATATCAACAA CGGCATACCGGACTCCCGCACCAACCATGTACGCGAATTTATTCTCTCGGAACCATTAGATGATTCAAGTACTATCATCA CTATAGAAGGTAATCCGGAAGGTGTACGTATGGAGAAAGGACGACGTCTCCTGCAAATTGACAACGAGCTTGTCACTTAT GAGAACTATACCACCGAACCACCATATCAATTTACGGGATGTGTACGGGGAGTATTTAACTCAAAAGCAGCCTCACATGA CAAAGGACAACATTTCAGACTATTGGATGTAGATGACTGGCCCCTGTTTATCCGTGTCAACCAAAATACAGGAATCCAAA AAGAGATTGCCGAACGTTTAGGAAAAATCTACCACGAAGCAGGCTTTCGTTTTGTCTATTTTGATGGTGCGGAAGATGTA CCGATGCCTTATTGGTATAATGTCTCCCGCTCTCAGATGATAGTATACAACGAAATGAAACCAACTCCATTATTTGCAGA AGGAGCATTGAAATCACATTATGGATGGCATATTTTAAGTCGTGGGAATGCTTTCGATATATTCCCTCCGGAACGTATCC GTCCGGCAATGAAGAAGTATACACTTCGATGTGCAGAGCAGATAGCCAAAGATTTTACTTCTGTCAATTTCGGATGGGTG AATTACTTGGCTCCCAACGACAAGACAATAGGCATGCAACCAGACATGTATGAATATATTTGCAGCAAAGCTGTCGCATG GAATTCTCCCATATCATTAGTTGGCAATTTAAAAGAGTTACAGAATCATCCTCGTACGGAAGATAACCTGAGAGTTATCA AAATGTGGGAAGAAGTAAAACTTCAAGGTGTCCTGACAGACAAACAGAAAGAATTACTCAAAAATCCCGAACAAGAATAT CTTCTGATGAAAGATAAAAAAGGAAATTATCAGTTATACCCCTATCGTCAAATAACCAAGGATGACGAAAAGCCAATCCG GGCATTCATTTTCCAGAAAGCAGGAAGGACTTGTATCATTTATTGGCATATGAACGGTACAGGGCAACTCACTCTTGATA TAGAAAAAAACAAGCTGTCTTTGATGAATGAGAGTGGTAAAAGAATACCTATCCGGTCAGCAGGAAGCAAAAGTATCCTC CCCGCAGCAGGGCGTCTCATATTGGAAACCGCTCTTCCACAAGAGGAAGTAATAAAATTATTCAGAAAAAGCATCGAAAT TATTAAATAG
Upstream 100 bases:
>100_bases TACTGTTTTCGGAATTTCCTGAAAGGAAATCTGATTAATACACGCAATCTGCCGGTCAGACCATTTCGCACAGATAAGTG GTAATAAAAACATAAAATAA
Downstream 100 bases:
>100_bases AAATTATTCATCCTAATCTTTTGTATATGAGAAATATGATAACCGGTATTATTAGCATATTATGCTATTTACAATGTTTT GGAACTTTATCAGCCTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MMKRIYYTYPVLLVWLVSTLLPQFCIAMPNEQKENNDVVIENAEMRLIISNDGKARSLIHKATGEECLITNADVPLCAIT QYRPYDNENFLMFPAKPRTFPANKIERNGNELRIEFQDTYDIAIIELNITDYYIGFTLKQIDYRIEDFGVKRKTEIDEIS LLQLPVRKRENFGEWLNVSWDEQTAICLLGTHPTTYIDAFANKEYTTMYAGLDFQVKLFNSGAALITTSKEKLLTCIDKV ERDYHMPLGVESRQRKEYQYSYYELRDVTTKNIDEHIAYAQKGGFKSIVVYYVDFAKACGHYEWRKEYPNGMKDLQEITN KIKAAGMIPGIHIHYSKVAVNDPYINNGIPDSRTNHVREFILSEPLDDSSTIITIEGNPEGVRMEKGRRLLQIDNELVTY ENYTTEPPYQFTGCVRGVFNSKAASHDKGQHFRLLDVDDWPLFIRVNQNTGIQKEIAERLGKIYHEAGFRFVYFDGAEDV PMPYWYNVSRSQMIVYNEMKPTPLFAEGALKSHYGWHILSRGNAFDIFPPERIRPAMKKYTLRCAEQIAKDFTSVNFGWV NYLAPNDKTIGMQPDMYEYICSKAVAWNSPISLVGNLKELQNHPRTEDNLRVIKMWEEVKLQGVLTDKQKELLKNPEQEY LLMKDKKGNYQLYPYRQITKDDEKPIRAFIFQKAGRTCIIYWHMNGTGQLTLDIEKNKLSLMNESGKRIPIRSAGSKSIL PAAGRLILETALPQEEVIKLFRKSIEIIK
Sequences:
>Translated_749_residues MMKRIYYTYPVLLVWLVSTLLPQFCIAMPNEQKENNDVVIENAEMRLIISNDGKARSLIHKATGEECLITNADVPLCAIT QYRPYDNENFLMFPAKPRTFPANKIERNGNELRIEFQDTYDIAIIELNITDYYIGFTLKQIDYRIEDFGVKRKTEIDEIS LLQLPVRKRENFGEWLNVSWDEQTAICLLGTHPTTYIDAFANKEYTTMYAGLDFQVKLFNSGAALITTSKEKLLTCIDKV ERDYHMPLGVESRQRKEYQYSYYELRDVTTKNIDEHIAYAQKGGFKSIVVYYVDFAKACGHYEWRKEYPNGMKDLQEITN KIKAAGMIPGIHIHYSKVAVNDPYINNGIPDSRTNHVREFILSEPLDDSSTIITIEGNPEGVRMEKGRRLLQIDNELVTY ENYTTEPPYQFTGCVRGVFNSKAASHDKGQHFRLLDVDDWPLFIRVNQNTGIQKEIAERLGKIYHEAGFRFVYFDGAEDV PMPYWYNVSRSQMIVYNEMKPTPLFAEGALKSHYGWHILSRGNAFDIFPPERIRPAMKKYTLRCAEQIAKDFTSVNFGWV NYLAPNDKTIGMQPDMYEYICSKAVAWNSPISLVGNLKELQNHPRTEDNLRVIKMWEEVKLQGVLTDKQKELLKNPEQEY LLMKDKKGNYQLYPYRQITKDDEKPIRAFIFQKAGRTCIIYWHMNGTGQLTLDIEKNKLSLMNESGKRIPIRSAGSKSIL PAAGRLILETALPQEEVIKLFRKSIEIIK >Mature_749_residues MMKRIYYTYPVLLVWLVSTLLPQFCIAMPNEQKENNDVVIENAEMRLIISNDGKARSLIHKATGEECLITNADVPLCAIT QYRPYDNENFLMFPAKPRTFPANKIERNGNELRIEFQDTYDIAIIELNITDYYIGFTLKQIDYRIEDFGVKRKTEIDEIS LLQLPVRKRENFGEWLNVSWDEQTAICLLGTHPTTYIDAFANKEYTTMYAGLDFQVKLFNSGAALITTSKEKLLTCIDKV ERDYHMPLGVESRQRKEYQYSYYELRDVTTKNIDEHIAYAQKGGFKSIVVYYVDFAKACGHYEWRKEYPNGMKDLQEITN KIKAAGMIPGIHIHYSKVAVNDPYINNGIPDSRTNHVREFILSEPLDDSSTIITIEGNPEGVRMEKGRRLLQIDNELVTY ENYTTEPPYQFTGCVRGVFNSKAASHDKGQHFRLLDVDDWPLFIRVNQNTGIQKEIAERLGKIYHEAGFRFVYFDGAEDV PMPYWYNVSRSQMIVYNEMKPTPLFAEGALKSHYGWHILSRGNAFDIFPPERIRPAMKKYTLRCAEQIAKDFTSVNFGWV NYLAPNDKTIGMQPDMYEYICSKAVAWNSPISLVGNLKELQNHPRTEDNLRVIKMWEEVKLQGVLTDKQKELLKNPEQEY LLMKDKKGNYQLYPYRQITKDDEKPIRAFIFQKAGRTCIIYWHMNGTGQLTLDIEKNKLSLMNESGKRIPIRSAGSKSIL PAAGRLILETALPQEEVIKLFRKSIEIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86844; Mature: 86844
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRIYYTYPVLLVWLVSTLLPQFCIAMPNEQKENNDVVIENAEMRLIISNDGKARSLIH CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCHHHHHH KATGEECLITNADVPLCAITQYRPYDNENFLMFPAKPRTFPANKIERNGNELRIEFQDTY HCCCCEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCCCCCHHHHCCCCEEEEEEECCE DIAIIELNITDYYIGFTLKQIDYRIEDFGVKRKTEIDEISLLQLPVRKRENFGEWLNVSW EEEEEEEEEEEEEEEEEEEHHHEEHHHCCCCCCCCCCCEEEEECCCHHHCCCCCEEECCC DEQTAICLLGTHPTTYIDAFANKEYTTMYAGLDFQVKLFNSGAALITTSKEKLLTCIDKV CCCEEEEEEECCCCHHHHHHCCCCEEEEEECCEEEEEEECCCEEEEEECHHHHHHHHHHH ERDYHMPLGVESRQRKEYQYSYYELRDVTTKNIDEHIAYAQKGGFKSIVVYYVDFAKACG HHHCCCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHC HYEWRKEYPNGMKDLQEITNKIKAAGMIPGIHIHYSKVAVNDPYINNGIPDSRTNHVREF CCHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH ILSEPLDDSSTIITIEGNPEGVRMEKGRRLLQIDNELVTYENYTTEPPYQFTGCVRGVFN HHCCCCCCCCEEEEEECCCCCEEHHHCCEEEEECCEEEEECCCCCCCCHHHHHHHHHHHC SKAASHDKGQHFRLLDVDDWPLFIRVNQNTGIQKEIAERLGKIYHEAGFRFVYFDGAEDV CCCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC PMPYWYNVSRSQMIVYNEMKPTPLFAEGALKSHYGWHILSRGNAFDIFPPERIRPAMKKY CCCEEECCCCCEEEEEECCCCCCEEECCCHHCCCCEEEEECCCEEECCCCHHHHHHHHHH TLRCAEQIAKDFTSVNFGWVNYLAPNDKTIGMQPDMYEYICSKAVAWNSPISLVGNLKEL HHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCCCHHHHCCHHHH QNHPRTEDNLRVIKMWEEVKLQGVLTDKQKELLKNPEQEYLLMKDKKGNYQLYPYRQITK HCCCCCCCCEEEEEEEEHHEEEEEECHHHHHHHCCCCCCEEEEECCCCCEEEEEEHHCCC DDEKPIRAFIFQKAGRTCIIYWHMNGTGQLTLDIEKNKLSLMNESGKRIPIRSAGSKSIL CCCHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCEEEHCCCCCCEEEECCCCCCCCC PAAGRLILETALPQEEVIKLFRKSIEIIK CCCCCEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MMKRIYYTYPVLLVWLVSTLLPQFCIAMPNEQKENNDVVIENAEMRLIISNDGKARSLIH CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCHHHHHH KATGEECLITNADVPLCAITQYRPYDNENFLMFPAKPRTFPANKIERNGNELRIEFQDTY HCCCCEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCCCCCHHHHCCCCEEEEEEECCE DIAIIELNITDYYIGFTLKQIDYRIEDFGVKRKTEIDEISLLQLPVRKRENFGEWLNVSW EEEEEEEEEEEEEEEEEEEHHHEEHHHCCCCCCCCCCCEEEEECCCHHHCCCCCEEECCC DEQTAICLLGTHPTTYIDAFANKEYTTMYAGLDFQVKLFNSGAALITTSKEKLLTCIDKV CCCEEEEEEECCCCHHHHHHCCCCEEEEEECCEEEEEEECCCEEEEEECHHHHHHHHHHH ERDYHMPLGVESRQRKEYQYSYYELRDVTTKNIDEHIAYAQKGGFKSIVVYYVDFAKACG HHHCCCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHC HYEWRKEYPNGMKDLQEITNKIKAAGMIPGIHIHYSKVAVNDPYINNGIPDSRTNHVREF CCHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH ILSEPLDDSSTIITIEGNPEGVRMEKGRRLLQIDNELVTYENYTTEPPYQFTGCVRGVFN HHCCCCCCCCEEEEEECCCCCEEHHHCCEEEEECCEEEEECCCCCCCCHHHHHHHHHHHC SKAASHDKGQHFRLLDVDDWPLFIRVNQNTGIQKEIAERLGKIYHEAGFRFVYFDGAEDV CCCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC PMPYWYNVSRSQMIVYNEMKPTPLFAEGALKSHYGWHILSRGNAFDIFPPERIRPAMKKY CCCEEECCCCCEEEEEECCCCCCEEECCCHHCCCCEEEEECCCEEECCCCHHHHHHHHHH TLRCAEQIAKDFTSVNFGWVNYLAPNDKTIGMQPDMYEYICSKAVAWNSPISLVGNLKEL HHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCCCHHHHCCHHHH QNHPRTEDNLRVIKMWEEVKLQGVLTDKQKELLKNPEQEYLLMKDKKGNYQLYPYRQITK HCCCCCCCCEEEEEEEEHHEEEEEECHHHHHHHCCCCCCEEEEECCCCCEEEEEEHHCCC DDEKPIRAFIFQKAGRTCIIYWHMNGTGQLTLDIEKNKLSLMNESGKRIPIRSAGSKSIL CCCHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCEEEHCCCCCCEEEECCCCCCCCC PAAGRLILETALPQEEVIKLFRKSIEIIK CCCCCEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA