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The map label for this gene is 29348942

Identifier: 29348942

GI number: 29348942

Start: 4570671

End: 4572284

Strand: Reverse

Name: 29348942

Synonym: BT_3533

Alternate gene names: NA

Gene position: 4572284-4570671 (Counterclockwise)

Preceding gene: 29348943

Following gene: 29348924

Centisome position: 73.04

GC content: 33.83

Gene sequence:

>1614_bases
ATGAAAAGCATTCCAGTTTCTTCTATTCTATATTTTCTGTTGAGTTTGGGAGTCTTATTCGTAAATGCAAACACATTTAC
AGATTCCCAAATTTTCCCTAAATGGATGTTTATGTTCACAGGATTAGGAGTAATTGGATGTTTTTTTTCATTTTATCTTT
TCCGAGGAAAAAGGTTTATTTGCAATGCAAAATGTTGTTACTACACGGTTATTATATCTTGTTTTCTTCAAGCCGGATAC
GGTATATTACAATTTTTCAATATACTGTCTTCACATTCCATCACCTACAATGTTGTCGGTAGCTTTGATAATCCTGCCGG
TTTTGCAGGAAGTTTATGCGCAGGGTTACCATTTACCTTCTATTTTTTACAATATTCAAACAAAAAGGTTCAATGGGCCA
GTTGGTGTGCATTGTTTGTTATTGTCTTAGGAGTATTGCTATCAGAATCTCGCGCCGGGTCAATTAGTATATTTACCGTA
TTAGTAATTTACTTTATTCACCAAAACAAGAATAAGTTCCACTATAAAAAACATATCGGTAGCTTCTTACTCTGTCTATC
CTTTCTGCTGATTAGTATATTTGTCATTTCTGTAACAGTCTATCATCTAAAAAAAGATTCGGCTGATGGTAGATTATTAA
TATGGCGTTGCACATGGGAAATGATAAAACATGAGCCTTTTACAGGATATGGAGTCGGAGGATTCAGCGCACACTATATG
GATTATCAAGCCCAATATTTCAAGGAACATCCGGATAGTCAATTTGCAATTTTAGCAGACAATATTAAGAGTCCTTTTAA
TGAATACCTTTCTGTCGGAGTCCAGTTTGGTATTCTAACTTGGGTACTTTTGATAGCTGCTGGTATTTTCTTGATTCTTT
GTCACAGGAAGCACCCAACCAAAGCAGGATATGTGTCTCTGCTCTCTTTACTTTCCATTGCAGTTTTTTCTTTTTTCTCT
TATCCATTCACTTATCCCTTCATTTGGATTATTAGTGCATTAAGTGTTAGTACTTTAATAGGAAAAGCCTATGAAAATAC
CTTGTTTCAAAAAACAACAATTATAAAAAGAGGAATTGCTTTTTTCTTATTAATAGGAAGTTTATTTTTGCTTATTGAAG
TGGTGAGCAGAATTAAAGCAGAACTGGAATGGGGAAAAGTAGCGCATATGTCGCTCTGTGGACGAACCAATGACATGTTA
CCACGATACCATAATTTACTACATACTTTTAGAAGAAATCCTTATTTCTTATATAATTACTCTGCCGAACTTTGTGTTGC
CGAAAAATATAAAGAATGCTTAGCAATAACGGCTATTTGCTGTAATTATTGGTCAGATTACAATTTAGAATTAGTACAAG
CAGAGGCATATATTGGCCTAAAACAATATGATGCAGCCAAACATCATTTAGAGAAAGCTACCTTAATGTGTCCTGTAAGG
TTTATACCTCTTTATAGGTTACATTATGTCTACATGAAACAGGGAAAGGCAGAAAAGGCAAATAGGCTGGCTCAATTAAT
CATAGAAAAACCTATAAAAAAGAATTCTACAATCATTCAAAAAATTAAGGCTGAGATGAAACATCATTTATCGAGAAAAA
CATGTTTGTACTAA

Upstream 100 bases:

>100_bases
CGGAAATCTTTTCTTCAAAGACGAAAAAGGTGCGACTCACAGTGAAGATTTCACCAAATATTTCGTCTTAGAGCCTTGAA
ACAGCAACTAATATAAATAA

Downstream 100 bases:

>100_bases
AAGCATACACAACAGTGCATTTGGAAGGCGAAAACATAAATAAGAATACGCCTTTTATGGTCGAAGAGATTGCCAAAACT
TTAAAGGCAAACAAATAACG

Product: hypothetical protein

Products: NA

Alternate protein names: O-Antigen Polymerase Superfamily

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MKSIPVSSILYFLLSLGVLFVNANTFTDSQIFPKWMFMFTGLGVIGCFFSFYLFRGKRFICNAKCCYYTVIISCFLQAGY
GILQFFNILSSHSITYNVVGSFDNPAGFAGSLCAGLPFTFYFLQYSNKKVQWASWCALFVIVLGVLLSESRAGSISIFTV
LVIYFIHQNKNKFHYKKHIGSFLLCLSFLLISIFVISVTVYHLKKDSADGRLLIWRCTWEMIKHEPFTGYGVGGFSAHYM
DYQAQYFKEHPDSQFAILADNIKSPFNEYLSVGVQFGILTWVLLIAAGIFLILCHRKHPTKAGYVSLLSLLSIAVFSFFS
YPFTYPFIWIISALSVSTLIGKAYENTLFQKTTIIKRGIAFFLLIGSLFLLIEVVSRIKAELEWGKVAHMSLCGRTNDML
PRYHNLLHTFRRNPYFLYNYSAELCVAEKYKECLAITAICCNYWSDYNLELVQAEAYIGLKQYDAAKHHLEKATLMCPVR
FIPLYRLHYVYMKQGKAEKANRLAQLIIEKPIKKNSTIIQKIKAEMKHHLSRKTCLY

Sequences:

>Translated_537_residues
MKSIPVSSILYFLLSLGVLFVNANTFTDSQIFPKWMFMFTGLGVIGCFFSFYLFRGKRFICNAKCCYYTVIISCFLQAGY
GILQFFNILSSHSITYNVVGSFDNPAGFAGSLCAGLPFTFYFLQYSNKKVQWASWCALFVIVLGVLLSESRAGSISIFTV
LVIYFIHQNKNKFHYKKHIGSFLLCLSFLLISIFVISVTVYHLKKDSADGRLLIWRCTWEMIKHEPFTGYGVGGFSAHYM
DYQAQYFKEHPDSQFAILADNIKSPFNEYLSVGVQFGILTWVLLIAAGIFLILCHRKHPTKAGYVSLLSLLSIAVFSFFS
YPFTYPFIWIISALSVSTLIGKAYENTLFQKTTIIKRGIAFFLLIGSLFLLIEVVSRIKAELEWGKVAHMSLCGRTNDML
PRYHNLLHTFRRNPYFLYNYSAELCVAEKYKECLAITAICCNYWSDYNLELVQAEAYIGLKQYDAAKHHLEKATLMCPVR
FIPLYRLHYVYMKQGKAEKANRLAQLIIEKPIKKNSTIIQKIKAEMKHHLSRKTCLY
>Mature_537_residues
MKSIPVSSILYFLLSLGVLFVNANTFTDSQIFPKWMFMFTGLGVIGCFFSFYLFRGKRFICNAKCCYYTVIISCFLQAGY
GILQFFNILSSHSITYNVVGSFDNPAGFAGSLCAGLPFTFYFLQYSNKKVQWASWCALFVIVLGVLLSESRAGSISIFTV
LVIYFIHQNKNKFHYKKHIGSFLLCLSFLLISIFVISVTVYHLKKDSADGRLLIWRCTWEMIKHEPFTGYGVGGFSAHYM
DYQAQYFKEHPDSQFAILADNIKSPFNEYLSVGVQFGILTWVLLIAAGIFLILCHRKHPTKAGYVSLLSLLSIAVFSFFS
YPFTYPFIWIISALSVSTLIGKAYENTLFQKTTIIKRGIAFFLLIGSLFLLIEVVSRIKAELEWGKVAHMSLCGRTNDML
PRYHNLLHTFRRNPYFLYNYSAELCVAEKYKECLAITAICCNYWSDYNLELVQAEAYIGLKQYDAAKHHLEKATLMCPVR
FIPLYRLHYVYMKQGKAEKANRLAQLIIEKPIKKNSTIIQKIKAEMKHHLSRKTCLY

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61642; Mature: 61642

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIPVSSILYFLLSLGVLFVNANTFTDSQIFPKWMFMFTGLGVIGCFFSFYLFRGKRFI
CCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
CNAKCCYYTVIISCFLQAGYGILQFFNILSSHSITYNVVGSFDNPAGFAGSLCAGLPFTF
ECCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHCCHHHH
YFLQYSNKKVQWASWCALFVIVLGVLLSESRAGSISIFTVLVIYFIHQNKNKFHYKKHIG
HHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
SFLLCLSFLLISIFVISVTVYHLKKDSADGRLLIWRCTWEMIKHEPFTGYGVGGFSAHYM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCHHHHH
DYQAQYFKEHPDSQFAILADNIKSPFNEYLSVGVQFGILTWVLLIAAGIFLILCHRKHPT
HHHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KAGYVSLLSLLSIAVFSFFSYPFTYPFIWIISALSVSTLIGKAYENTLFQKTTIIKRGIA
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLLIGSLFLLIEVVSRIKAELEWGKVAHMSLCGRTNDMLPRYHNLLHTFRRNPYFLYNY
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEC
SAELCVAEKYKECLAITAICCNYWSDYNLELVQAEAYIGLKQYDAAKHHLEKATLMCPVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHCCHH
FIPLYRLHYVYMKQGKAEKANRLAQLIIEKPIKKNSTIIQKIKAEMKHHLSRKTCLY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSIPVSSILYFLLSLGVLFVNANTFTDSQIFPKWMFMFTGLGVIGCFFSFYLFRGKRFI
CCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
CNAKCCYYTVIISCFLQAGYGILQFFNILSSHSITYNVVGSFDNPAGFAGSLCAGLPFTF
ECCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHCCHHHH
YFLQYSNKKVQWASWCALFVIVLGVLLSESRAGSISIFTVLVIYFIHQNKNKFHYKKHIG
HHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
SFLLCLSFLLISIFVISVTVYHLKKDSADGRLLIWRCTWEMIKHEPFTGYGVGGFSAHYM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCHHHHH
DYQAQYFKEHPDSQFAILADNIKSPFNEYLSVGVQFGILTWVLLIAAGIFLILCHRKHPT
HHHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KAGYVSLLSLLSIAVFSFFSYPFTYPFIWIISALSVSTLIGKAYENTLFQKTTIIKRGIA
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLLIGSLFLLIEVVSRIKAELEWGKVAHMSLCGRTNDMLPRYHNLLHTFRRNPYFLYNY
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEC
SAELCVAEKYKECLAITAICCNYWSDYNLELVQAEAYIGLKQYDAAKHHLEKATLMCPVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHCCHH
FIPLYRLHYVYMKQGKAEKANRLAQLIIEKPIKKNSTIIQKIKAEMKHHLSRKTCLY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA