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The map label for this gene is 29348924

Identifier: 29348924

GI number: 29348924

Start: 4538498

End: 4539667

Strand: Reverse

Name: 29348924

Synonym: BT_3515

Alternate gene names: NA

Gene position: 4539667-4538498 (Counterclockwise)

Preceding gene: 29348942

Following gene: 29348922

Centisome position: 72.51

GC content: 43.5

Gene sequence:

>1170_bases
ATGATTTATCAATATTTTATGCTTACTTTGCATTGTCATTATCAAATGAGAAGTACCATGAGAAGCAGATTGTTTTTATT
ATCCATTATCTTATTAATCGGTGTCTCTTGCCAGCATAAGAAGGCTACAACAGAGAAAGAAACTGTAGCCGCAGGAAATA
CCTATACGAACCCGTTACTTGAACGTGGAGCAGAGCCATGGGCTATTTTTCATGAAGGCAAATATTATTATACACAGGGC
TCAGAAAACAGAGTCATACTTTGGGAAACCGATGATATAACAGACCTCTCACATGCTACTCAAAAAGATGTATGGATACC
CACCGACCCCAGCAACTCCTATCATCTGTGGGCACCCGAAATTCATCGTATAAATAACAAATGGTATATTTACTTTGCCG
CAGACGACGGCAATATGGATAATCACCAGATTTATGTTGTCGAGAATGAAGCCGCCAACCCCATGGAAGGAACATTTGTG
ATGAAAGGACGCATACAGACAGATAAAGACAACAACTGGGCAATCCATGCCAGCACCTTTGAACATGATGGCCAACGCTA
TATGATATGGTGCGGCTGGCAAAAACGAAGGATAGACAGTGAAACCCAATGTATCTACATCGCTACTATGAAGAATCCAT
GGACACTGTCTTCTGACAGGATTCTCATCTCCAAACCTGAATATGAATGGGAATGCCAATGGGTAAATCCGGATGGCAGC
AAAACAGCCTATCCGATACATGTAAACGAAGCACCCCAATATTTTGAATCAAAGAATAAAGACAAAGCATGCATCTTCTA
TTCAGCCAGTGGTAGCTGGACTCCTTATTATTGTGTCGGATTACTGACTGCAGACGCAAAAGCTAACTTACTCAATCCGG
CTTCCTGGAAGAAGTCTCCGGTTCCGGTACTACAACAAGACCCTGAAAACAATGTATACGGTCCCGGCGGAATATCTTTC
ACTCCGTCTCCGGATGGGAAAGAATGGTATATGCTATATCATGCCCGCCAGATACCGAATGACGCTCCTGGCGCATCCGA
TTCCCGTTCTCCCCGTTTACAGAAGATAGACTGGGACAAAGACGGAATGCCCGTGCTGGGAACCCCTCAAAAAGAAGAGG
AACCAATGGCAAGGCCATCCGGTTCCCCTATTCATAAAAAACAGAACTAA

Upstream 100 bases:

>100_bases
ATTTAAAAGTTCACTTCGCAAAGATGAGAAAAAACAAAGAAAAGTTTCAGAAATTACAGTTCATTTAACAACAAAAACTG
ACCATTCTACTTCCATTTGC

Downstream 100 bases:

>100_bases
TTACAGATTGTACTCTGAGGGCCGAGATAAGAACGCTTCATTCCTCCCAAGTCAATGACAATCTTTTGAATAACGACGCC
CGGATCACCACAGCGTATCT

Product: putative glycosylhydrolase

Products: NA

Alternate protein names: Alpha-N-arabinofuranosidase II; Alpha-N-AFase II; Arabinosidase II [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MIYQYFMLTLHCHYQMRSTMRSRLFLLSIILLIGVSCQHKKATTEKETVAAGNTYTNPLLERGAEPWAIFHEGKYYYTQG
SENRVILWETDDITDLSHATQKDVWIPTDPSNSYHLWAPEIHRINNKWYIYFAADDGNMDNHQIYVVENEAANPMEGTFV
MKGRIQTDKDNNWAIHASTFEHDGQRYMIWCGWQKRRIDSETQCIYIATMKNPWTLSSDRILISKPEYEWECQWVNPDGS
KTAYPIHVNEAPQYFESKNKDKACIFYSASGSWTPYYCVGLLTADAKANLLNPASWKKSPVPVLQQDPENNVYGPGGISF
TPSPDGKEWYMLYHARQIPNDAPGASDSRSPRLQKIDWDKDGMPVLGTPQKEEEPMARPSGSPIHKKQN

Sequences:

>Translated_389_residues
MIYQYFMLTLHCHYQMRSTMRSRLFLLSIILLIGVSCQHKKATTEKETVAAGNTYTNPLLERGAEPWAIFHEGKYYYTQG
SENRVILWETDDITDLSHATQKDVWIPTDPSNSYHLWAPEIHRINNKWYIYFAADDGNMDNHQIYVVENEAANPMEGTFV
MKGRIQTDKDNNWAIHASTFEHDGQRYMIWCGWQKRRIDSETQCIYIATMKNPWTLSSDRILISKPEYEWECQWVNPDGS
KTAYPIHVNEAPQYFESKNKDKACIFYSASGSWTPYYCVGLLTADAKANLLNPASWKKSPVPVLQQDPENNVYGPGGISF
TPSPDGKEWYMLYHARQIPNDAPGASDSRSPRLQKIDWDKDGMPVLGTPQKEEEPMARPSGSPIHKKQN
>Mature_389_residues
MIYQYFMLTLHCHYQMRSTMRSRLFLLSIILLIGVSCQHKKATTEKETVAAGNTYTNPLLERGAEPWAIFHEGKYYYTQG
SENRVILWETDDITDLSHATQKDVWIPTDPSNSYHLWAPEIHRINNKWYIYFAADDGNMDNHQIYVVENEAANPMEGTFV
MKGRIQTDKDNNWAIHASTFEHDGQRYMIWCGWQKRRIDSETQCIYIATMKNPWTLSSDRILISKPEYEWECQWVNPDGS
KTAYPIHVNEAPQYFESKNKDKACIFYSASGSWTPYYCVGLLTADAKANLLNPASWKKSPVPVLQQDPENNVYGPGGISF
TPSPDGKEWYMLYHARQIPNDAPGASDSRSPRLQKIDWDKDGMPVLGTPQKEEEPMARPSGSPIHKKQN

Specific function: Unknown

COG id: COG3940

COG function: function code R; Predicted beta-xylosidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016828
- InterPro:   IPR006710
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 44822; Mature: 44822

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYQYFMLTLHCHYQMRSTMRSRLFLLSIILLIGVSCQHKKATTEKETVAAGNTYTNPLL
CEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEECCCCCCCHHH
ERGAEPWAIFHEGKYYYTQGSENRVILWETDDITDLSHATQKDVWIPTDPSNSYHLWAPE
HCCCCCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEECCH
IHRINNKWYIYFAADDGNMDNHQIYVVENEAANPMEGTFVMKGRIQTDKDNNWAIHASTF
HEEECCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEEEE
EHDGQRYMIWCGWQKRRIDSETQCIYIATMKNPWTLSSDRILISKPEYEWECQWVNPDGS
ECCCCEEEEEECCHHCCCCCCCCEEEEEEECCCEEECCCEEEEECCCCCEEEEEECCCCC
KTAYPIHVNEAPQYFESKNKDKACIFYSASGSWTPYYCVGLLTADAKANLLNPASWKKSP
CEEEEEEECCCCHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
VPVLQQDPENNVYGPGGISFTPSPDGKEWYMLYHARQIPNDAPGASDSRSPRLQKIDWDK
CCHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCC
DGMPVLGTPQKEEEPMARPSGSPIHKKQN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIYQYFMLTLHCHYQMRSTMRSRLFLLSIILLIGVSCQHKKATTEKETVAAGNTYTNPLL
CEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEECCCCCCCHHH
ERGAEPWAIFHEGKYYYTQGSENRVILWETDDITDLSHATQKDVWIPTDPSNSYHLWAPE
HCCCCCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEECCH
IHRINNKWYIYFAADDGNMDNHQIYVVENEAANPMEGTFVMKGRIQTDKDNNWAIHASTF
HEEECCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEEEE
EHDGQRYMIWCGWQKRRIDSETQCIYIATMKNPWTLSSDRILISKPEYEWECQWVNPDGS
ECCCCEEEEEECCHHCCCCCCCCEEEEEEECCCEEECCCEEEEECCCCCEEEEEECCCCC
KTAYPIHVNEAPQYFESKNKDKACIFYSASGSWTPYYCVGLLTADAKANLLNPASWKKSP
CEEEEEEECCCCHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
VPVLQQDPENNVYGPGGISFTPSPDGKEWYMLYHARQIPNDAPGASDSRSPRLQKIDWDK
CCHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCC
DGMPVLGTPQKEEEPMARPSGSPIHKKQN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10657233 [H]