Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29348943

Identifier: 29348943

GI number: 29348943

Start: 4572306

End: 4572986

Strand: Reverse

Name: 29348943

Synonym: BT_3534

Alternate gene names: NA

Gene position: 4572986-4572306 (Counterclockwise)

Preceding gene: 29348944

Following gene: 29348942

Centisome position: 73.05

GC content: 33.77

Gene sequence:

>681_bases
ATGAACAACATTCTAAATACCAATCATACGTCCATCTATAAATTATTATTCGTCCTATTTTTTGCAGGGATTTGTAATCT
GCCATTTAAATGCAATGCTCAGGAATACTCCAAATTGGACGAAGTACCACAGTGGGTCAAAGAAAAAGTTAATCATGAGG
AATATAAATTATGGGAAGTCATGAGTTCTGTTTTTCAAATTGACTACTCTTTTCTCAAAAAAGATATCTCTCAAGAAAGA
AAAAAAGAAATACTTCACCTCTTGCAAAATACTGTGTCAAGAATCCAAAATGGTTCATACAATATCGAAAAAGGCTCTTT
ATTTTGTGTAGCTGATGAATTTAAAATTGACTCCTTGACAAATTGGAACACCGAAATCTTAGAATGCAGGAAAAAAAGCG
GTATTATTTATTCCAGCAGGGACGGCTATGACGCGCATTATAAACTAACTGTGATTTATGGATATGACAAAATGAATAAA
AAAGTATATCCGATAAAAAATGAATTAGAGTGTATTAGTTACTCTGGAATAGAGATTACATGCAACGACCTGCCAATTGT
AAAATATAACGAAGTCGAAGGAAAGCTGCAAGGAACCTGCTACGGAAATCTTTTCTTCAAAGACGAAAAAGGTGCGACTC
ACAGTGAAGATTTCACCAAATATTTCGTCTTAGAGCCTTGA

Upstream 100 bases:

>100_bases
GAATATACACAAGATTAATCTTGGTACAGTTAGTACTCTTTTGTGATTTTCTATTCAGATCTTGAAAAAAGTTATAGAAC
AATTAAAAATAATAGTCACC

Downstream 100 bases:

>100_bases
AACAGCAACTAATATAAATAAATGAAAAGCATTCCAGTTTCTTCTATTCTATATTTTCTGTTGAGTTTGGGAGTCTTATT
CGTAAATGCAAACACATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNNILNTNHTSIYKLLFVLFFAGICNLPFKCNAQEYSKLDEVPQWVKEKVNHEEYKLWEVMSSVFQIDYSFLKKDISQER
KKEILHLLQNTVSRIQNGSYNIEKGSLFCVADEFKIDSLTNWNTEILECRKKSGIIYSSRDGYDAHYKLTVIYGYDKMNK
KVYPIKNELECISYSGIEITCNDLPIVKYNEVEGKLQGTCYGNLFFKDEKGATHSEDFTKYFVLEP

Sequences:

>Translated_226_residues
MNNILNTNHTSIYKLLFVLFFAGICNLPFKCNAQEYSKLDEVPQWVKEKVNHEEYKLWEVMSSVFQIDYSFLKKDISQER
KKEILHLLQNTVSRIQNGSYNIEKGSLFCVADEFKIDSLTNWNTEILECRKKSGIIYSSRDGYDAHYKLTVIYGYDKMNK
KVYPIKNELECISYSGIEITCNDLPIVKYNEVEGKLQGTCYGNLFFKDEKGATHSEDFTKYFVLEP
>Mature_226_residues
MNNILNTNHTSIYKLLFVLFFAGICNLPFKCNAQEYSKLDEVPQWVKEKVNHEEYKLWEVMSSVFQIDYSFLKKDISQER
KKEILHLLQNTVSRIQNGSYNIEKGSLFCVADEFKIDSLTNWNTEILECRKKSGIIYSSRDGYDAHYKLTVIYGYDKMNK
KVYPIKNELECISYSGIEITCNDLPIVKYNEVEGKLQGTCYGNLFFKDEKGATHSEDFTKYFVLEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26439; Mature: 26439

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNILNTNHTSIYKLLFVLFFAGICNLPFKCNAQEYSKLDEVPQWVKEKVNHEEYKLWEV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MSSVFQIDYSFLKKDISQERKKEILHLLQNTVSRIQNGSYNIEKGSLFCVADEFKIDSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCC
NWNTEILECRKKSGIIYSSRDGYDAHYKLTVIYGYDKMNKKVYPIKNELECISYSGIEIT
CCCHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCCCCEECCCCCCCCEEEECCCEEE
CNDLPIVKYNEVEGKLQGTCYGNLFFKDEKGATHSEDFTKYFVLEP
ECCCCEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNNILNTNHTSIYKLLFVLFFAGICNLPFKCNAQEYSKLDEVPQWVKEKVNHEEYKLWEV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MSSVFQIDYSFLKKDISQERKKEILHLLQNTVSRIQNGSYNIEKGSLFCVADEFKIDSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCC
NWNTEILECRKKSGIIYSSRDGYDAHYKLTVIYGYDKMNKKVYPIKNELECISYSGIEIT
CCCHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCCCCEECCCCCCCCEEEECCCEEE
CNDLPIVKYNEVEGKLQGTCYGNLFFKDEKGATHSEDFTKYFVLEP
ECCCCEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA