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The map label for this gene is 29348710

Identifier: 29348710

GI number: 29348710

Start: 4233887

End: 4235074

Strand: Reverse

Name: 29348710

Synonym: BT_3301

Alternate gene names: NA

Gene position: 4235074-4233887 (Counterclockwise)

Preceding gene: 29348712

Following gene: 29348709

Centisome position: 67.65

GC content: 39.14

Gene sequence:

>1188_bases
ATGAAATCACCGTGTATTTTACTAATCATAGTTTGCACCCTCTCTTTGACTGGTTGTGCCTCAACAAAGCAGGCAGACTC
AGATTCAAGTTTGGGAAAAGCCCAGCAGACATTGGATTCCCTTTATCAACATTACTCAGCAAAGGACTCTTATCTGCTTC
GTGAAAACTATCCTTTCAACGAACAATATAAAGTCACTTATCTGGCATCGGAAAACCAAACAAACATGCCTAATCAGTTC
TCCTATTTATGGCCATATTCAGGTACATTTTCCGCAGTAAACTCATTATTAGAAGCCACCCACGACAAGAAATACCAGCA
ATTATTAGAAAAACAGGTATTACCCGGCTTGGAAGAATACTTCGATACAGAAAGAACTCCTATTGCTTACTCATCGTATA
TCCGAACTGCTCCGACCTCCGACCGCTTTTATGACGATAATATCTGGGTAGGCATTGACTTCATCGATATCTATCAGATT
ACCAAAGAAAAAAAATATTTGGATAAAGCTCAACTCATATGGAATTTCATAGAAAGCGGTACTGATAGTCTGCTAGGAGA
TGGCATCTATTGGTGTGAACAAAAGAAAGAGTCCAAAAACACTTGTTCAAATGCTCCCGGTTCTGTATTCGCCCTCAAAC
TATTTAAAGCAACCAATGACAGCCTCTATTTCAAACGGGGAAAAGAATTATATAAATGGACACAAAAGAATCTGCAAGAT
TCTACAGACTACCTCTATTTTGACAATATCCGTCTTGACGGTAAGATAGGAAAAGCCAAATTTGCCTACAACAGCGGACA
AATGATGCAATCGGCTGCCCTACTCTATCAACTGACCAAAAATCCGGATTACTTGAAAGATGCGCAGAGCATTGCCAAAG
AATGCTATAATTACTTCTTCACAGACTTTACAACTGACACAGGAGAAAGCCTTAAAATGTTGAAACAAGGAAATATCTGG
TTTACTGCTGTCATGTTAAGAGGATTCATTGAACTTTACCAATTGGACCAAAACAAAACTTTTATCGACGCTTTCAATCA
ATGCCTATCATATGCTTGGGATAATGCCCGTGATGAAAACGGCTTATTCAGCACAGACCTAACTGGCAATAACAATAATG
AGAAGAAGTGGCTGCTAACGCAAGCTGCCATGGTCGAAATGTATAGCCGACTAGCAACTATACAATAA

Upstream 100 bases:

>100_bases
TGTAGTTTGAAATAGGTAATCCACAAACAGGTAGCATATTCAGCTACCTGTATTTTGGAAGGAAAATCTTTAGTTAATAA
TGAATATAATATTATATAGA

Downstream 100 bases:

>100_bases
GTACAAATTTAAAACAATAAATAATTAAGGCTATATAATATAAAGGTCTTCCGTCACAACACAGCACAAAATAATAGCTA
CACAAAAACCAATACTCAAA

Product: putative alpha-1,6-mannanase

Products: NA

Alternate protein names: Alpha-1 6-Mannanase; Glycosyl Hydrolase Family; Hydrolase; Glycosylhydrolase; Alpha-L-Arabinofuranosidase B Family Protein; Glycoside Hydrolase Family Protein; Membrane Attached Hydrolase; Glycosyl Hydrolase; Glycoside Hydrolase; Glysosyl Hydrolase Family

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKSPCILLIIVCTLSLTGCASTKQADSDSSLGKAQQTLDSLYQHYSAKDSYLLRENYPFNEQYKVTYLASENQTNMPNQF
SYLWPYSGTFSAVNSLLEATHDKKYQQLLEKQVLPGLEEYFDTERTPIAYSSYIRTAPTSDRFYDDNIWVGIDFIDIYQI
TKEKKYLDKAQLIWNFIESGTDSLLGDGIYWCEQKKESKNTCSNAPGSVFALKLFKATNDSLYFKRGKELYKWTQKNLQD
STDYLYFDNIRLDGKIGKAKFAYNSGQMMQSAALLYQLTKNPDYLKDAQSIAKECYNYFFTDFTTDTGESLKMLKQGNIW
FTAVMLRGFIELYQLDQNKTFIDAFNQCLSYAWDNARDENGLFSTDLTGNNNNEKKWLLTQAAMVEMYSRLATIQ

Sequences:

>Translated_395_residues
MKSPCILLIIVCTLSLTGCASTKQADSDSSLGKAQQTLDSLYQHYSAKDSYLLRENYPFNEQYKVTYLASENQTNMPNQF
SYLWPYSGTFSAVNSLLEATHDKKYQQLLEKQVLPGLEEYFDTERTPIAYSSYIRTAPTSDRFYDDNIWVGIDFIDIYQI
TKEKKYLDKAQLIWNFIESGTDSLLGDGIYWCEQKKESKNTCSNAPGSVFALKLFKATNDSLYFKRGKELYKWTQKNLQD
STDYLYFDNIRLDGKIGKAKFAYNSGQMMQSAALLYQLTKNPDYLKDAQSIAKECYNYFFTDFTTDTGESLKMLKQGNIW
FTAVMLRGFIELYQLDQNKTFIDAFNQCLSYAWDNARDENGLFSTDLTGNNNNEKKWLLTQAAMVEMYSRLATIQ
>Mature_395_residues
MKSPCILLIIVCTLSLTGCASTKQADSDSSLGKAQQTLDSLYQHYSAKDSYLLRENYPFNEQYKVTYLASENQTNMPNQF
SYLWPYSGTFSAVNSLLEATHDKKYQQLLEKQVLPGLEEYFDTERTPIAYSSYIRTAPTSDRFYDDNIWVGIDFIDIYQI
TKEKKYLDKAQLIWNFIESGTDSLLGDGIYWCEQKKESKNTCSNAPGSVFALKLFKATNDSLYFKRGKELYKWTQKNLQD
STDYLYFDNIRLDGKIGKAKFAYNSGQMMQSAALLYQLTKNPDYLKDAQSIAKECYNYFFTDFTTDTGESLKMLKQGNIW
FTAVMLRGFIELYQLDQNKTFIDAFNQCLSYAWDNARDENGLFSTDLTGNNNNEKKWLLTQAAMVEMYSRLATIQ

Specific function: Unknown

COG id: COG4833

COG function: function code G; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45608; Mature: 45608

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPCILLIIVCTLSLTGCASTKQADSDSSLGKAQQTLDSLYQHYSAKDSYLLRENYPFN
CCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
EQYKVTYLASENQTNMPNQFSYLWPYSGTFSAVNSLLEATHDKKYQQLLEKQVLPGLEEY
CCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHH
FDTERTPIAYSSYIRTAPTSDRFYDDNIWVGIDFIDIYQITKEKKYLDKAQLIWNFIESG
HCCCCCCEEHHHHHCCCCCCCCEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
TDSLLGDGIYWCEQKKESKNTCSNAPGSVFALKLFKATNDSLYFKRGKELYKWTQKNLQD
CHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEHHCCHHHHHHHHHHCCC
STDYLYFDNIRLDGKIGKAKFAYNSGQMMQSAALLYQLTKNPDYLKDAQSIAKECYNYFF
CCCEEEEECEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TDFTTDTGESLKMLKQGNIWFTAVMLRGFIELYQLDQNKTFIDAFNQCLSYAWDNARDEN
HCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
GLFSTDLTGNNNNEKKWLLTQAAMVEMYSRLATIQ
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSPCILLIIVCTLSLTGCASTKQADSDSSLGKAQQTLDSLYQHYSAKDSYLLRENYPFN
CCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
EQYKVTYLASENQTNMPNQFSYLWPYSGTFSAVNSLLEATHDKKYQQLLEKQVLPGLEEY
CCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHH
FDTERTPIAYSSYIRTAPTSDRFYDDNIWVGIDFIDIYQITKEKKYLDKAQLIWNFIESG
HCCCCCCEEHHHHHCCCCCCCCEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
TDSLLGDGIYWCEQKKESKNTCSNAPGSVFALKLFKATNDSLYFKRGKELYKWTQKNLQD
CHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEHHCCHHHHHHHHHHCCC
STDYLYFDNIRLDGKIGKAKFAYNSGQMMQSAALLYQLTKNPDYLKDAQSIAKECYNYFF
CCCEEEEECEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TDFTTDTGESLKMLKQGNIWFTAVMLRGFIELYQLDQNKTFIDAFNQCLSYAWDNARDEN
HCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
GLFSTDLTGNNNNEKKWLLTQAAMVEMYSRLATIQ
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA