BacMap

Definition	Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession	NC_004663
Length	6,260,361

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The map label for this gene is cshA [H]

Identifier: 29348712

GI number: 29348712

Start: 4240031

End: 4241974

Strand: Reverse

Name: cshA [H]

Synonym: BT_3303

Alternate gene names: 29348712

Gene position: 4241974-4240031 (Counterclockwise)

Preceding gene: 29348713

Following gene: 29348710

Centisome position: 67.76

GC content: 49.9

Gene sequence:

>1944_bases
ATGAAGACATTTGAAGAGCTTGGCGTTTCTCCGGAGATACGTAAAGCAATTGAAGAGATGGGATATGAGAATCCCATGCC
GGTACAAGAGGAAGTGATTCCGTACCTTTTAGGAGAAAATAATGATGTAGTAGCTCTTGCACAAACTGGAACAGGTAAAA
CAGCCGCATTCGGCCTGCCTCTGCTCCAACAGATTGACGTAAAGAACAGGGTTCCCCAGTCACTAATACTTTGCCCCACC
CGTGAGCTATGCCTCCAGATAGCGGGCGATCTGAACGATTACTCAAAATACATTGACGGACTGAAAGTACTGCCAGTTTA
CGGCGGTTCTTCCATCGACAGCCAGATACGCAGCCTGAAACGCGGCGTACATATCATCGTGGCCACACCGGGACGACTGC
TCGACCTGATGGAGCGCAAAACCGTATCTTTATCGACCGTTCACAACATAGTGATGGACGAAGCGGACGAAATGCTGAAT
ATGGGATTCACCGACAGCATCAACGCTATCCTTGCCGATGTCCCCAAAGAACGGAACACCTTGCTCTTCTCGGCAACCAT
GAGCCCCGAAATCGCCCGCATCTCCAAGAACTACTTGCAGAATGCCAAGGAGATTACCATCGGACGCAAGAACGAAAGTA
CAAGCAATGTGAAACACGTAGCTTATACCGTACAAGCCAAAGACAAATATGCAGCCCTGAAACGCATTGTTGACTATTAC
CCGCAAATATATGGTATCATTTTCTGCCGTACCCGTAAAGAAACGCAGGAAATAGCCGATAAATTGATGCAGGAAGGCTA
TAACGCAGATTCACTGCACGGAGAACTGTCACAGGCTCAGCGCGATGCCGTGATGCAGAAATTCCGCATCCGCAACCTGC
AATTACTGGTTGCTACGGACGTTGCCGCACGCGGACTGGACGTAGACGACCTGACACACGTGATCAACTACGGCCTGCCC
GATGATACGGAAAGCTACACACATCGTAGCGGACGTACCGGACGTGCCGGAAAGACAGGTACTTCCATCGCTATCATCAA
CCTGCGCGAAAAAGGAAAGCTGCGTGAGATAGAGCGCATCATCGGCAAGAAGTTTATTGCCGGAGAAATGCCGACAGGCA
AGCAGATCTGCGAAAAACAGCTTATCAAAGTGATTGATGAACTGGAAAAGGTGAAGGTAAACGAAGAAGAAATCACGGAC
TTCATGCCGGAGATTTATCGTAAGCTGGAATGGCTGAGCAAAGAGGATCTGATCAAACGCATGGTATCGCATGAGTTCAA
TCGTTTTCTGGACTACTACCGCGACCGTGAAGAGATCGAGACTCCGACCGACAGCCGCGAACGTAACACACGTGACAGCC
GTGAAAGAGGCAGCCGCAAGGCAGCGCCGGGTTTCACCCGCTTATTCATCAATCTGGGAAAAATGGACAGTTTCTTCCCA
AGCGAACTGATCAGCTTGCTGAACAGCAATACACGTGGACGAATCGAGTTGGGACGCATTGACTTGATGAAAAATTTCTC
CTTCTTCGAAGTAGAAGAGAAAGAAGCACAAAACGTAGTGAAGGCGTTGAACCGCGCTAACTGGAACGGCCGCAAAGTAT
CTGTAGAAGTTGCCGGTGAGGAAGCAGGAGAAGGTCGGAGAGGCAGTGGTTCTGCCGAACGCAGAGGAGGAAAACGTCCT
TTCGGAAGTTCCTCCGAAAAGCGTAGTGACAGTAGCCGCAACTCACGTTCCGAAAGATCGGACAGAGCACCGCGAGCTGA
CAGAGCGACTAAAGGCAGTGACAAGACCGACAAGAAAAAAAGAAGCGACAAGCCCAGCCGCGAAGAACGGGGTTACGGAG
CACGTGGTCCTAAAAAGACAGACGACTGGCAACAGTTCTTTAAAGATAAAGAGCCTGACTTCAGCGAGGAAGGATGGGCA
CGCAGAAAGCCGAAAAAGAAGTAA

Upstream 100 bases:

>100_bases
GAATGCTATGCAGGCAGCAATAATTATCCATTATCCATTATTCATTATTCATTATTTTTCTCTATCTTTGCGCCCGAAAT
AAAAGATATACAGAGATTTA

Downstream 100 bases:

>100_bases
CAGGCAAAACAGCCATTATAAGGTGATGTTGGAAAAGAAGAAGATTTAAGGCGTTGATATAGTTTACCTATTCATAACCG
ATATTGACGTAACATATTTA

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPT
RELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLN
MGFTDSINAILADVPKERNTLLFSATMSPEIARISKNYLQNAKEITIGRKNESTSNVKHVAYTVQAKDKYAALKRIVDYY
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATDVAARGLDVDDLTHVINYGLP
DDTESYTHRSGRTGRAGKTGTSIAIINLREKGKLREIERIIGKKFIAGEMPTGKQICEKQLIKVIDELEKVKVNEEEITD
FMPEIYRKLEWLSKEDLIKRMVSHEFNRFLDYYRDREEIETPTDSRERNTRDSRERGSRKAAPGFTRLFINLGKMDSFFP
SELISLLNSNTRGRIELGRIDLMKNFSFFEVEEKEAQNVVKALNRANWNGRKVSVEVAGEEAGEGRRGSGSAERRGGKRP
FGSSSEKRSDSSRNSRSERSDRAPRADRATKGSDKTDKKKRSDKPSREERGYGARGPKKTDDWQQFFKDKEPDFSEEGWA
RRKPKKK

Sequences:

>Translated_647_residues
MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPT
RELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLN
MGFTDSINAILADVPKERNTLLFSATMSPEIARISKNYLQNAKEITIGRKNESTSNVKHVAYTVQAKDKYAALKRIVDYY
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATDVAARGLDVDDLTHVINYGLP
DDTESYTHRSGRTGRAGKTGTSIAIINLREKGKLREIERIIGKKFIAGEMPTGKQICEKQLIKVIDELEKVKVNEEEITD
FMPEIYRKLEWLSKEDLIKRMVSHEFNRFLDYYRDREEIETPTDSRERNTRDSRERGSRKAAPGFTRLFINLGKMDSFFP
SELISLLNSNTRGRIELGRIDLMKNFSFFEVEEKEAQNVVKALNRANWNGRKVSVEVAGEEAGEGRRGSGSAERRGGKRP
FGSSSEKRSDSSRNSRSERSDRAPRADRATKGSDKTDKKKRSDKPSREERGYGARGPKKTDDWQQFFKDKEPDFSEEGWA
RRKPKKK
>Mature_647_residues
MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPT
RELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLN
MGFTDSINAILADVPKERNTLLFSATMSPEIARISKNYLQNAKEITIGRKNESTSNVKHVAYTVQAKDKYAALKRIVDYY
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATDVAARGLDVDDLTHVINYGLP
DDTESYTHRSGRTGRAGKTGTSIAIINLREKGKLREIERIIGKKFIAGEMPTGKQICEKQLIKVIDELEKVKVNEEEITD
FMPEIYRKLEWLSKEDLIKRMVSHEFNRFLDYYRDREEIETPTDSRERNTRDSRERGSRKAAPGFTRLFINLGKMDSFFP
SELISLLNSNTRGRIELGRIDLMKNFSFFEVEEKEAQNVVKALNRANWNGRKVSVEVAGEEAGEGRRGSGSAERRGGKRP
FGSSSEKRSDSSRNSRSERSDRAPRADRATKGSDKTDKKKRSDKPSREERGYGARGPKKTDDWQQFFKDKEPDFSEEGWA
RRKPKKK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=38.1720430107527, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=38.1720430107527, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=38.1720430107527, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=38.3783783783784, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=38.3783783783784, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI50659095, Length=412, Percent_Identity=34.4660194174757, Blast_Score=243, Evalue=4e-64,
Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=36.1643835616438, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI45446747, Length=356, Percent_Identity=35.1123595505618, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI45446743, Length=356, Percent_Identity=35.1123595505618, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI13129006, Length=425, Percent_Identity=34.3529411764706, Blast_Score=240, Evalue=4e-63,
Organism=Homo sapiens, GI41327771, Length=398, Percent_Identity=33.4170854271357, Blast_Score=239, Evalue=8e-63,
Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=36.5168539325843, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI222352149, Length=355, Percent_Identity=37.7464788732394, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=32.972972972973, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=34.8189415041783, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=35.5555555555556, Blast_Score=229, Evalue=6e-60,
Organism=Homo sapiens, GI55749865, Length=359, Percent_Identity=34.8189415041783, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI216548263, Length=368, Percent_Identity=35.054347826087, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI13518015, Length=368, Percent_Identity=35.054347826087, Blast_Score=223, Evalue=5e-58,
Organism=Homo sapiens, GI262231852, Length=368, Percent_Identity=35.054347826087, Blast_Score=223, Evalue=5e-58,
Organism=Homo sapiens, GI224593278, Length=399, Percent_Identity=33.5839598997494, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI262118318, Length=368, Percent_Identity=35.054347826087, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI148613856, Length=370, Percent_Identity=33.5135135135135, Blast_Score=218, Evalue=2e-56,
Organism=Homo sapiens, GI38201710, Length=370, Percent_Identity=33.5135135135135, Blast_Score=218, Evalue=2e-56,
Organism=Homo sapiens, GI4758138, Length=379, Percent_Identity=34.0369393139842, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=34, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=35.978835978836, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI21040371, Length=349, Percent_Identity=33.5243553008596, Blast_Score=204, Evalue=3e-52,
Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=32.3529411764706, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI51094101, Length=366, Percent_Identity=31.4207650273224, Blast_Score=203, Evalue=4e-52,
Organism=Homo sapiens, GI6005743, Length=357, Percent_Identity=33.8935574229692, Blast_Score=203, Evalue=4e-52,
Organism=Homo sapiens, GI164419743, Length=366, Percent_Identity=31.4207650273224, Blast_Score=203, Evalue=4e-52,
Organism=Homo sapiens, GI8922886, Length=357, Percent_Identity=33.6134453781513, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI83700235, Length=360, Percent_Identity=32.7777777777778, Blast_Score=200, Evalue=4e-51,
Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=32.6086956521739, Blast_Score=199, Evalue=8e-51,
Organism=Homo sapiens, GI4758112, Length=349, Percent_Identity=32.6647564469914, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI18375623, Length=349, Percent_Identity=32.6647564469914, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI164419732, Length=368, Percent_Identity=34.2391304347826, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI62241022, Length=338, Percent_Identity=34.0236686390533, Blast_Score=190, Evalue=4e-48,
Organism=Homo sapiens, GI41327779, Length=359, Percent_Identity=31.4763231197772, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI62241024, Length=315, Percent_Identity=33.968253968254, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI38569505, Length=377, Percent_Identity=30.2387267904509, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI38569503, Length=377, Percent_Identity=30.2387267904509, Blast_Score=172, Evalue=8e-43,
Organism=Homo sapiens, GI13514831, Length=410, Percent_Identity=30.2439024390244, Blast_Score=172, Evalue=1e-42,
Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=29.7142857142857, Blast_Score=169, Evalue=7e-42,
Organism=Homo sapiens, GI38327634, Length=362, Percent_Identity=31.767955801105, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI17505907, Length=406, Percent_Identity=29.064039408867, Blast_Score=152, Evalue=9e-37,
Organism=Homo sapiens, GI4826686, Length=367, Percent_Identity=28.0653950953678, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=24.9370277078086, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI256773275, Length=384, Percent_Identity=27.6041666666667, Blast_Score=128, Evalue=2e-29,
Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=29.9065420560748, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=26.9607843137255, Blast_Score=115, Evalue=2e-25,
Organism=Homo sapiens, GI20336298, Length=230, Percent_Identity=32.1739130434783, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI4557365, Length=355, Percent_Identity=25.3521126760563, Blast_Score=86, Evalue=1e-16,
Organism=Escherichia coli, GI87082221, Length=397, Percent_Identity=42.5692695214106, Blast_Score=332, Evalue=4e-92,
Organism=Escherichia coli, GI1787016, Length=369, Percent_Identity=42.2764227642276, Blast_Score=300, Evalue=2e-82,
Organism=Escherichia coli, GI1787605, Length=366, Percent_Identity=40.9836065573771, Blast_Score=268, Evalue=1e-72,
Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=34.7708894878706, Blast_Score=222, Evalue=6e-59,
Organism=Escherichia coli, GI1788930, Length=393, Percent_Identity=33.8422391857506, Blast_Score=188, Evalue=1e-48,
Organism=Escherichia coli, GI48994977, Length=127, Percent_Identity=30.7086614173228, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17555296, Length=365, Percent_Identity=37.5342465753425, Blast_Score=252, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=36.2204724409449, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI71987143, Length=360, Percent_Identity=33.8888888888889, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=34.4086021505376, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=34.1397849462366, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=382, Percent_Identity=35.8638743455497, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17510307, Length=382, Percent_Identity=35.8638743455497, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71995514, Length=382, Percent_Identity=35.8638743455497, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=35.9550561797753, Blast_Score=235, Evalue=7e-62,
Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=34.9081364829396, Blast_Score=229, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI115532548, Length=380, Percent_Identity=37.1052631578947, Blast_Score=228, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI115532546, Length=380, Percent_Identity=37.1052631578947, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI115533224, Length=349, Percent_Identity=34.6704871060172, Blast_Score=225, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI71995718, Length=384, Percent_Identity=34.6354166666667, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17510559, Length=570, Percent_Identity=29.6491228070175, Blast_Score=221, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI17552114, Length=356, Percent_Identity=32.8651685393258, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI71999646, Length=363, Percent_Identity=32.2314049586777, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI71999644, Length=363, Percent_Identity=32.2314049586777, Blast_Score=211, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17536099, Length=371, Percent_Identity=33.1536388140162, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17536101, Length=371, Percent_Identity=33.1536388140162, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17536103, Length=371, Percent_Identity=33.1536388140162, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17507945, Length=342, Percent_Identity=35.672514619883, Blast_Score=205, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17552642, Length=352, Percent_Identity=32.6704545454545, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71982858, Length=348, Percent_Identity=31.3218390804598, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17507879, Length=388, Percent_Identity=32.4742268041237, Blast_Score=189, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17507877, Length=374, Percent_Identity=32.8877005347594, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17507881, Length=375, Percent_Identity=31.7333333333333, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17509811, Length=369, Percent_Identity=30.8943089430894, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17556951, Length=366, Percent_Identity=31.6939890710383, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=29.973474801061, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=27.5862068965517, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17505370, Length=380, Percent_Identity=32.8947368421053, Blast_Score=156, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=29.7650130548303, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71990816, Length=384, Percent_Identity=33.0729166666667, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17508543, Length=379, Percent_Identity=28.2321899736148, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=349, Percent_Identity=26.0744985673352, Blast_Score=141, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=28.9544235924933, Blast_Score=140, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI25148203, Length=415, Percent_Identity=25.7831325301205, Blast_Score=137, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=34.9514563106796, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=364, Percent_Identity=25, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=369, Percent_Identity=26.8292682926829, Blast_Score=123, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=40.2061855670103, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25145561, Length=347, Percent_Identity=22.7665706051873, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324778, Length=359, Percent_Identity=36.4902506963788, Blast_Score=246, Evalue=6e-66,
Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=36.2637362637363, Blast_Score=243, Evalue=8e-65,
Organism=Saccharomyces cerevisiae, GI6320224, Length=361, Percent_Identity=35.1800554016621, Blast_Score=240, Evalue=6e-64,
Organism=Saccharomyces cerevisiae, GI6321856, Length=366, Percent_Identity=36.8852459016393, Blast_Score=239, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6324217, Length=361, Percent_Identity=35.7340720221607, Blast_Score=229, Evalue=7e-61,
Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=37.0165745856354, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6320449, Length=391, Percent_Identity=35.5498721227622, Blast_Score=224, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6320041, Length=365, Percent_Identity=34.7945205479452, Blast_Score=220, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=32.7027027027027, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=32.7027027027027, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6324620, Length=358, Percent_Identity=32.6815642458101, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=34.180790960452, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320119, Length=352, Percent_Identity=32.6704545454545, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=399, Percent_Identity=32.0802005012531, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6321111, Length=372, Percent_Identity=34.4086021505376, Blast_Score=184, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=28.8770053475936, Blast_Score=177, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=32.9048843187661, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6323947, Length=406, Percent_Identity=32.7586206896552, Blast_Score=166, Evalue=9e-42,
Organism=Saccharomyces cerevisiae, GI6322427, Length=388, Percent_Identity=28.3505154639175, Blast_Score=165, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6319618, Length=430, Percent_Identity=27.906976744186, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321267, Length=327, Percent_Identity=31.4984709480122, Blast_Score=160, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6323306, Length=420, Percent_Identity=27.6190476190476, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320173, Length=237, Percent_Identity=31.6455696202532, Blast_Score=137, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6321374, Length=461, Percent_Identity=23.4273318872017, Blast_Score=99, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6324366, Length=349, Percent_Identity=23.7822349570201, Blast_Score=99, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6322876, Length=236, Percent_Identity=30.0847457627119, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21355075, Length=370, Percent_Identity=36.4864864864865, Blast_Score=248, Evalue=8e-66,
Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=36.5168539325843, Blast_Score=243, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24585582, Length=367, Percent_Identity=35.9673024523161, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=34.6456692913386, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=35.195530726257, Blast_Score=234, Evalue=2e-61,
Organism=Drosophila melanogaster, GI28574962, Length=388, Percent_Identity=35.8247422680412, Blast_Score=232, Evalue=6e-61,
Organism=Drosophila melanogaster, GI24584399, Length=340, Percent_Identity=36.7647058823529, Blast_Score=232, Evalue=6e-61,
Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=35.1206434316354, Blast_Score=231, Evalue=9e-61,
Organism=Drosophila melanogaster, GI18857967, Length=385, Percent_Identity=34.2857142857143, Blast_Score=228, Evalue=8e-60,
Organism=Drosophila melanogaster, GI24645031, Length=379, Percent_Identity=32.9815303430079, Blast_Score=225, Evalue=6e-59,
Organism=Drosophila melanogaster, GI17977678, Length=361, Percent_Identity=34.0720221606648, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24583281, Length=359, Percent_Identity=34.2618384401114, Blast_Score=224, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24583279, Length=359, Percent_Identity=34.2618384401114, Blast_Score=224, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=34.5303867403315, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=34.5303867403315, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=34.5303867403315, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=34.5303867403315, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=34.5303867403315, Blast_Score=215, Evalue=7e-56,
Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=34.5303867403315, Blast_Score=215, Evalue=7e-56,
Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=34.5303867403315, Blast_Score=215, Evalue=7e-56,
Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=32.6086956521739, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24582080, Length=358, Percent_Identity=33.7988826815642, Blast_Score=213, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24582078, Length=358, Percent_Identity=33.7988826815642, Blast_Score=213, Evalue=4e-55,
Organism=Drosophila melanogaster, GI17136248, Length=358, Percent_Identity=33.7988826815642, Blast_Score=213, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24582075, Length=358, Percent_Identity=33.7988826815642, Blast_Score=213, Evalue=4e-55,
Organism=Drosophila melanogaster, GI21356161, Length=369, Percent_Identity=32.2493224932249, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=31.4606741573034, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=31.4606741573034, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=31.4606741573034, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI17136814, Length=397, Percent_Identity=32.7455919395466, Blast_Score=187, Evalue=3e-47,
Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=35.031847133758, Blast_Score=186, Evalue=6e-47,
Organism=Drosophila melanogaster, GI21355559, Length=360, Percent_Identity=31.1111111111111, Blast_Score=169, Evalue=5e-42,
Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=30.5555555555556, Blast_Score=169, Evalue=8e-42,
Organism=Drosophila melanogaster, GI28571808, Length=373, Percent_Identity=31.3672922252011, Blast_Score=163, Evalue=4e-40,
Organism=Drosophila melanogaster, GI28571809, Length=373, Percent_Identity=31.3672922252011, Blast_Score=163, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=31.2169312169312, Blast_Score=155, Evalue=1e-37,
Organism=Drosophila melanogaster, GI20130173, Length=440, Percent_Identity=27.0454545454545, Blast_Score=155, Evalue=1e-37,
Organism=Drosophila melanogaster, GI17647335, Length=381, Percent_Identity=25.7217847769029, Blast_Score=150, Evalue=3e-36,
Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=25.8426966292135, Blast_Score=142, Evalue=7e-34,
Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=25.8426966292135, Blast_Score=142, Evalue=7e-34,
Organism=Drosophila melanogaster, GI24643725, Length=409, Percent_Identity=27.6283618581907, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=27.3006134969325, Blast_Score=135, Evalue=1e-31,
Organism=Drosophila melanogaster, GI19920478, Length=397, Percent_Identity=27.455919395466, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=23.2758620689655, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=24.6411483253589, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24646066, Length=362, Percent_Identity=25.414364640884, Blast_Score=83, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 73483; Mature: 73483

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP
CCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCH
LLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLK
HHHHHCHHHCCCCCEEECCCHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHH
RGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPKERNT
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCE
LLFSATMSPEIARISKNYLQNAKEITIGRKNESTSNVKHVAYTVQAKDKYAALKRIVDYY
EEEEECCCCHHHHHHHHHHCCCHHEEECCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHH
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATD
HHHHEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEH
VAARGLDVDDLTHVINYGLPDDTESYTHRSGRTGRAGKTGTSIAIINLREKGKLREIERI
HHHCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
IGKKFIAGEMPTGKQICEKQLIKVIDELEKVKVNEEEITDFMPEIYRKLEWLSKEDLIKR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
MVSHEFNRFLDYYRDREEIETPTDSRERNTRDSRERGSRKAAPGFTRLFINLGKMDSFFP
HHHHHHHHHHHHHHCHHHHCCCCCCHHCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCH
SELISLLNSNTRGRIELGRIDLMKNFSFFEVEEKEAQNVVKALNRANWNGRKVSVEVAGE
HHHHHHHCCCCCCEEEECHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCCEEEEEECCC
EAGEGRRGSGSAERRGGKRPFGSSSEKRSDSSRNSRSERSDRAPRADRATKGSDKTDKKK
CCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RSDKPSREERGYGARGPKKTDDWQQFFKDKEPDFSEEGWARRKPKKK
HCCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP
CCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCH
LLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLK
HHHHHCHHHCCCCCEEECCCHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHH
RGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPKERNT
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCE
LLFSATMSPEIARISKNYLQNAKEITIGRKNESTSNVKHVAYTVQAKDKYAALKRIVDYY
EEEEECCCCHHHHHHHHHHCCCHHEEECCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHH
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATD
HHHHEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEH
VAARGLDVDDLTHVINYGLPDDTESYTHRSGRTGRAGKTGTSIAIINLREKGKLREIERI
HHHCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
IGKKFIAGEMPTGKQICEKQLIKVIDELEKVKVNEEEITDFMPEIYRKLEWLSKEDLIKR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
MVSHEFNRFLDYYRDREEIETPTDSRERNTRDSRERGSRKAAPGFTRLFINLGKMDSFFP
HHHHHHHHHHHHHHCHHHHCCCCCCHHCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCH
SELISLLNSNTRGRIELGRIDLMKNFSFFEVEEKEAQNVVKALNRANWNGRKVSVEVAGE
HHHHHHHCCCCCCEEEECHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCCEEEEEECCC
EAGEGRRGSGSAERRGGKRPFGSSSEKRSDSSRNSRSERSDRAPRADRATKGSDKTDKKK
CCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RSDKPSREERGYGARGPKKTDDWQQFFKDKEPDFSEEGWARRKPKKK
HCCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA