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The map label for this gene is yqaA [C]

Identifier: 29348660

GI number: 29348660

Start: 4150692

End: 4151171

Strand: Reverse

Name: yqaA [C]

Synonym: BT_3251

Alternate gene names: 29348660

Gene position: 4151171-4150692 (Counterclockwise)

Preceding gene: 29348661

Following gene: 29348659

Centisome position: 66.31

GC content: 47.92

Gene sequence:

>480_bases
ATGGACGCTTTTATAGATTCAACGATACAACTCCTCATCGAATGGGGACTTCCGGGATTGTTTATCTCGGCCTTACTCGC
AGGGAGTATTGTACCATTCAGTTCCGAACTGGTGTTGGTAGCACTGGTAAAACTCGGACTGCCACCCACTGCCTGTATAT
TGGCTGCCACCCTCGGCAATACGGCAGGCGGAATGACCTGCTACTATATGGGGCGTCTGGGCAAAATAAGCTGGATTGAG
AAATACTTCAAAGTAAAGAAGGAGAAAGTAGACAAGATGGTGAAATTCCTGCAAGGGAAAGGAGCATTGATGGCATTCTT
CGCTTTCCTGCCGGCCATCGGAGAGGTGATCTCCATCGCACTGGGATTTATGCGAAGTAATATATGGCTTACCACCACCT
CCATGTTTGTCGGCAAACTGATACGTTACATTCTGCTTCTGTATGTACTGGAAAGCGCATGGAACGTCGTTGCAGGATGA

Upstream 100 bases:

>100_bases
TACTGATCGGACACCTTTTTGTGCTGACCAACAACAAAACATCGAATATATTCTTCATTGTTGCCACGGTCTGCCTCATC
CTTTTATTTGGTTTTAACGT

Downstream 100 bases:

>100_bases
AATAATAGGTAATAAGTAACAGGTAATAGGTAATAAGTTTTTTGAGATGAAAAGAGTGATTGAAAAGACTGATGACGGGA
GCGCCACCCTATTTGTTCCG

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MDAFIDSTIQLLIEWGLPGLFISALLAGSIVPFSSELVLVALVKLGLPPTACILAATLGNTAGGMTCYYMGRLGKISWIE
KYFKVKKEKVDKMVKFLQGKGALMAFFAFLPAIGEVISIALGFMRSNIWLTTTSMFVGKLIRYILLLYVLESAWNVVAG

Sequences:

>Translated_159_residues
MDAFIDSTIQLLIEWGLPGLFISALLAGSIVPFSSELVLVALVKLGLPPTACILAATLGNTAGGMTCYYMGRLGKISWIE
KYFKVKKEKVDKMVKFLQGKGALMAFFAFLPAIGEVISIALGFMRSNIWLTTTSMFVGKLIRYILLLYVLESAWNVVAG
>Mature_159_residues
MDAFIDSTIQLLIEWGLPGLFISALLAGSIVPFSSELVLVALVKLGLPPTACILAATLGNTAGGMTCYYMGRLGKISWIE
KYFKVKKEKVDKMVKFLQGKGALMAFFAFLPAIGEVISIALGFMRSNIWLTTTSMFVGKLIRYILLLYVLESAWNVVAG

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqaA [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=128, Percent_Identity=29.6875, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 17349; Mature: 17349

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAFIDSTIQLLIEWGLPGLFISALLAGSIVPFSSELVLVALVKLGLPPTACILAATLGN
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
TAGGMTCYYMGRLGKISWIEKYFKVKKEKVDKMVKFLQGKGALMAFFAFLPAIGEVISIA
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LGFMRSNIWLTTTSMFVGKLIRYILLLYVLESAWNVVAG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAFIDSTIQLLIEWGLPGLFISALLAGSIVPFSSELVLVALVKLGLPPTACILAATLGN
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
TAGGMTCYYMGRLGKISWIEKYFKVKKEKVDKMVKFLQGKGALMAFFAFLPAIGEVISIA
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LGFMRSNIWLTTTSMFVGKLIRYILLLYVLESAWNVVAG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]