| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348661
Identifier: 29348661
GI number: 29348661
Start: 4151156
End: 4152166
Strand: Reverse
Name: 29348661
Synonym: BT_3252
Alternate gene names: NA
Gene position: 4152166-4151156 (Counterclockwise)
Preceding gene: 29348662
Following gene: 29348660
Centisome position: 66.32
GC content: 50.15
Gene sequence:
>1011_bases ATGAGAAACAAGAGACTACAAGGTCTGGTCACAGCAGGGCGGTGGACACTCCCTGCTGCGATTTTCATCTGCACCCTTTG TTGGGTGCTGACCTCTGTCCTATTGCCCGAACTCACCATGACAGCGGGCGAAGAAGGCGGTTCCGTGCTTTGGCAGTCTG CCCGCACGTTGCTGCTCCCCGCATGGGCGGAGCATCTTGTCAGTTTCTTGATTTACGCGGCTATCGGCTATTTCCTGATC GAGCTGAACAACCGGTTCAGTATTATCCGTATGCGGGCTTCCGTGCAGACAGCTATCTATTTTCTGCTGGTCACCGTCTG TCCGGAGATGCACCTGCTATATGCCGGAAACGTTGCCGCCATAACCTTTTTATTCTCCATCTATTTCCTGTTCAAGAGTT ACCAGCAGGCGCAGGCGTCAGGATATCTGTTCTACTCGTTCCTGTTTATCGGTGCAGGGAGCATTCTCTTTCCCCAGCTC ACCTTCTTCTCGGTGCTCTGGCTGTTTGAGGCGCACCGCTTTCAGTCACTTACGTTCCGCAGTTTCTGCGGCGCACTGAT AGGATGGACAATGCCCTACTGGATGCTGTTCGGACACGCTTTTTTCTATGATCAGATGGAGCTGTTCTATCATCCTTTCA AAGAGCTGGCCACTTTTGGGGACATATTCAACCTACAGATACTCCAGCCGTGGGAACTGGCGACTCTCGGTTATCTGCTT GTATTGTTCATCGTCAGCGCCGCTCATTGCGTCGTTGCCGGATTCGAAGATAAGATACGCACGCGCGCCTATTTACAGTT TCTCATAGACGTGACACTCTTTCTCTTCGTACTGATTGTGCTACAGCCGTCACAATGCAGCAATCTCTTGCCGTTGCTCA TGATAAGCAACAGCATACTGATCGGACACCTTTTTGTGCTGACCAACAACAAAACATCGAATATATTCTTCATTGTTGCC ACGGTCTGCCTCATCCTTTTATTTGGTTTTAACGTATGGACGCTTTTATAG
Upstream 100 bases:
>100_bases GCGCAACGAAGGAAGAAGCGCTGGCACAGAGCTATAAAGTGGCAGATATGATCGACTTCGACAAGAAATATTTCCGTCGC GATATCGGATTCGACTTATA
Downstream 100 bases:
>100_bases ATTCAACGATACAACTCCTCATCGAATGGGGACTTCCGGGATTGTTTATCTCGGCCTTACTCGCAGGGAGTATTGTACCA TTCAGTTCCGAACTGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRNKRLQGLVTAGRWTLPAAIFICTLCWVLTSVLLPELTMTAGEEGGSVLWQSARTLLLPAWAEHLVSFLIYAAIGYFLI ELNNRFSIIRMRASVQTAIYFLLVTVCPEMHLLYAGNVAAITFLFSIYFLFKSYQQAQASGYLFYSFLFIGAGSILFPQL TFFSVLWLFEAHRFQSLTFRSFCGALIGWTMPYWMLFGHAFFYDQMELFYHPFKELATFGDIFNLQILQPWELATLGYLL VLFIVSAAHCVVAGFEDKIRTRAYLQFLIDVTLFLFVLIVLQPSQCSNLLPLLMISNSILIGHLFVLTNNKTSNIFFIVA TVCLILLFGFNVWTLL
Sequences:
>Translated_336_residues MRNKRLQGLVTAGRWTLPAAIFICTLCWVLTSVLLPELTMTAGEEGGSVLWQSARTLLLPAWAEHLVSFLIYAAIGYFLI ELNNRFSIIRMRASVQTAIYFLLVTVCPEMHLLYAGNVAAITFLFSIYFLFKSYQQAQASGYLFYSFLFIGAGSILFPQL TFFSVLWLFEAHRFQSLTFRSFCGALIGWTMPYWMLFGHAFFYDQMELFYHPFKELATFGDIFNLQILQPWELATLGYLL VLFIVSAAHCVVAGFEDKIRTRAYLQFLIDVTLFLFVLIVLQPSQCSNLLPLLMISNSILIGHLFVLTNNKTSNIFFIVA TVCLILLFGFNVWTLL >Mature_336_residues MRNKRLQGLVTAGRWTLPAAIFICTLCWVLTSVLLPELTMTAGEEGGSVLWQSARTLLLPAWAEHLVSFLIYAAIGYFLI ELNNRFSIIRMRASVQTAIYFLLVTVCPEMHLLYAGNVAAITFLFSIYFLFKSYQQAQASGYLFYSFLFIGAGSILFPQL TFFSVLWLFEAHRFQSLTFRSFCGALIGWTMPYWMLFGHAFFYDQMELFYHPFKELATFGDIFNLQILQPWELATLGYLL VLFIVSAAHCVVAGFEDKIRTRAYLQFLIDVTLFLFVLIVLQPSQCSNLLPLLMISNSILIGHLFVLTNNKTSNIFFIVA TVCLILLFGFNVWTLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38390; Mature: 38390
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNKRLQGLVTAGRWTLPAAIFICTLCWVLTSVLLPELTMTAGEEGGSVLWQSARTLLLP CCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AWAEHLVSFLIYAAIGYFLIELNNRFSIIRMRASVQTAIYFLLVTVCPEMHLLYAGNVAA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHEEECCCHHH ITFLFSIYFLFKSYQQAQASGYLFYSFLFIGAGSILFPQLTFFSVLWLFEAHRFQSLTFR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SFCGALIGWTMPYWMLFGHAFFYDQMELFYHPFKELATFGDIFNLQILQPWELATLGYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHH VLFIVSAAHCVVAGFEDKIRTRAYLQFLIDVTLFLFVLIVLQPSQCSNLLPLLMISNSIL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHCCCEE IGHLFVLTNNKTSNIFFIVATVCLILLFGFNVWTLL EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRNKRLQGLVTAGRWTLPAAIFICTLCWVLTSVLLPELTMTAGEEGGSVLWQSARTLLLP CCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AWAEHLVSFLIYAAIGYFLIELNNRFSIIRMRASVQTAIYFLLVTVCPEMHLLYAGNVAA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHEEECCCHHH ITFLFSIYFLFKSYQQAQASGYLFYSFLFIGAGSILFPQLTFFSVLWLFEAHRFQSLTFR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SFCGALIGWTMPYWMLFGHAFFYDQMELFYHPFKELATFGDIFNLQILQPWELATLGYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHH VLFIVSAAHCVVAGFEDKIRTRAYLQFLIDVTLFLFVLIVLQPSQCSNLLPLLMISNSIL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHCCCEE IGHLFVLTNNKTSNIFFIVATVCLILLFGFNVWTLL EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA